Hemicordylus capensis (graceful crag lizard): 128336419
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Entry
128336419 CDS
T08891
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128336419 (RBBP6)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128336419 (RBBP6)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
U-box type E3
128336419 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
128336419
NCBI-ProteinID:
XP_053131990
LinkDB
All DBs
Position
13:complement(624742..658172)
Genome browser
AA seq
1801 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKCTSKTYVITHKLYRTIETSLRSRADPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPTYTCFRCLKP
GHYIKQCPTNADKSFESVPRIKKSTGIPRSFMMEVQDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTS
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQAQPPRQAVQRNM
PSVPRPTGSRQQDPLMMPAVSAPAHAAASLTLPPGQSMSASATVPGSQSSAASCSGEVSA
PLSMAHHPDKPEGPFRESDGMGPAAAIVAASDHPKPPSSLSINTVMEEKGYQVPVLGQPA
LPGQLGSHGHSIPTMGQPMRSNPMRSAGNRLGWEPSSNRGRPHSDRTQRTQAPTLPASTP
VFVPVPPPPLYPPPPPPHALPLPPGVPPPQFPPQFPPGQPPPAGYTVPPPGYPPAPANIS
TPWVPSPVPTAHSNAIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEY
KKIQKERRRSYSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPP
YPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVYRGQSPSKRPVPQGEGER
EYFGRFREVPPYDMKAYYGRTVDMRDPFEKERYREWETYREWYEKFYKGYAAGTQPRPLI
NRENFSPERFGPPGPRRENSPYIRGRRDDYPGGLGHRNRNVGSSYSEKMPGREGHSMKDM
SKLKEKEIENPPGDGKGSKHKKHRKKRKGEEGESFPSADPLEGSRKPRDPPAGEDPKPDP
LFMPPSRDDATPVRDEPMEADSVAFKPVSDKERKEKPKAKAEKGKRKVEGTAAPKKDVPA
KPAKAPQEKAEADREKAEADRAEPPPTKKVKEELPKADPAKSSSSSQKEEKPVSTPRKVH
PRATKEHPDTRSVKEEKAKKEHPKEVKQEKPSSKEDRSKKPVDKNKPVDAKPEKRKRKAE
EKAEKDHDTTSQKTSKQEVTELKPSPKGKTEPEGEKAEKTPEKEKTVSPVAPAKKIKLNR
ETGKKIVGTENIPPVKDTLAEKPEPANSKVKQEKTKGKLRRKVAAADGSGSMLVDYTSTS
SAGGSPVRKSEDKLDTKRTVIKTMEEYNNDIITAPPEDVIIMVQVPQSKWDKDDFDSEEE
EDKAGEEENKSGQVPSAIGKPASVVKNVSTKPSNPIKHNEKDPEPLEKSQRATKESGRES
SQPDSRSSKATTSNEKGKAKDRDHAASDRDSSEKRRSGAPLEKERSERSAEQSSLKSGPP
HSSCKESRSSEKHDSAHSSSAKDFTPNRDKKSDHDSSRDHSGSKRRDERSELARKKLSPS
RSRESAASGQKNKPREERADLPRREAGDSRWSSYSPPRDRRQSEHKAAYESRHSSAEHHK
SQERGSGKEREKRPSSETKSGKERVPAGSKPLHRHCSPEAREQGPVPNDRGAAKPKPQPS
HSSRLASDPTRETDEAAFVPDYNESDSDSNVSAKEEDSPSGRAAREGKEKEKAADKPKET
AVVVAAAAAAAAPSAAQPGRSQSQSSPSLSPSPSESQGRSRSSSASSADSQDSKKKKKKK
DKKKHKKHKKHKKHKKHAAATESEVERSQKHKHKKKKSKKSKDKEREKEKGEDQKAKAVT
V
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcgtgcactacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctccacatctcgctctgcgacctcaagcgccagatcatgggccgcgagaagctcaag
gccgccgactgcgacctccagatcaccaacgcccagaccaaggaagagtacacagatgat
aatgccctgattccgaagaactcttcagttattgtccgaagaattcctattggtggagta
aaatgtacaagcaaaacctatgtcataactcataagttatacagaaccatagaaacttct
ctcagaagtcgagctgatccagtgagtggaacttcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttacaaagaccgccaatctggctgaagccaatgcttccgaa
gaagataaaattaaagctatgatgtcacagtctggccacgagtatgatccaatcaattac
atgaagaaacccttgggtccacctcctccaacctatacttgctttcgttgcctaaaaccc
ggccattatataaagcagtgtccaaccaatgcggacaaaagctttgagtctgttcccagg
attaaaaagagcacaggaattccccgaagcttcatgatggaggtgcaggaccccaacacc
aagggtgccatgctcaccaacaccgggaaatatgccatcccaacaatagatgccgaggct
tatgccatagggaagaaggagaagccccctttcctgccagaggagccatcttcctcctca
gaagaagatgaccctattccagacgagctgttgtgtctgatctgcaaagatatcatgact
gatgctgtcgtcattccctgctgtggaaacagctactgtgatgaatgtatcagaacatca
ctgctagagtcggaggagcatacctgcccaacttgtcaccagacagatgtttctcctgat
gctttaattgccaacaagtttttgcgccaggctgtaaacaatttcaaaaatgaaactggc
tacaccaagaggcttcgcaaacaggctcagcctcccaggcaggccgtccagcggaatatg
ccttccgtaccaaggccaacggggtccaggcagcaggatcccctcatgatgccagcagtg
tctgctcctgctcatgcggctgcatccctcaccttgcctcctggccagtcgatgtctgca
tcagccacggtgccaggaagccagtcgtccgctgccagctgctcaggcgaggtctctgca
cccctgtccatggcacatcaccctgacaagcccgaaggacctttccgtgagagtgatggg
atggggccggctgctgctattgtggctgcttcagaccaccccaagccgccttcctcgcta
tcaattaatactgtgatggaggagaagggctaccaggttcctgtcctcgggcagccggcc
ttgccagggcagctgggctctcacgggcactcaatacccaccatgggtcagccaatgaga
agcaaccctatgcggtctgcaggcaaccggttgggctgggagccaagttcaaaccgagga
cgcccgcatagtgaccgcacacaaaggactcaggccccaacactgccagcctcaacaccc
gtctttgtgcccgtgcctccacctcccctgtatcctccgcctcctcctccccacgcactt
cctcttcctccgggggtgcctccaccacagtttcctcctcagtttccaccgggtcagcct
ccacctgctggttacactgtcccccctccgggataccccccggctccagcaaacatatca
acaccttgggtaccatcaccagtaccaacggctcactcaaatgccatcccaacgacacaa
gcacctcctctatctagggaggagttttacagagaacaacggagacttaaagaggaagag
aagaaaaagtccaagcttgatgagtttacaaatgattttgctaaggaactgatggaatat
aaaaaaatccagaaggagcgcaggcgttcctattcccggtccaaatcaccatatagcgcc
tcatcgtattcaagaagttcctatacatactcaaagtcgagatctggctcatctcgctct
cgctcatactccaggtctttcagccgctcccattcccgctcctactcaaggtcacccccc
tacccacggaggggcagggggaaaagtcggaattaccggtccaggtcccggtcccatgga
tatcatcggtcaaggtcaaggtcacccccctacagaagataccattctcgatccagatcg
ccagtctacagaggccagtctccaagtaagcgccccgttcctcaaggggaaggggaaagg
gagtactttggtcggtttcgagaagtcccgccttatgacatgaaagcctactatggcaga
actgtggacatgagagatccgtttgaaaaggagagataccgtgagtgggagacctacaga
gaatggtacgagaaattctacaagggctatgcggctggaacccaaccaagacctctgatt
aaccgagagaacttctccccagagcgattcggtcctcctggacctcggcgagagaattcc
ccatatattcggggtcgtagagatgattaccctggaggcctgggccatcggaaccgaaat
gtagggagcagctactctgaaaagatgccaggtcgagagggccacagtatgaaagacatg
tcgaaactgaaagagaaggagattgaaaacccaccaggagatgggaaaggaagtaaacat
aagaagcaccggaagaaacggaagggagaagaaggcgaaagcttcccaagtgcagacccg
ttggaaggctcgcggaagccaagagaccctcctgctggggaagaccccaagcccgaccca
ctcttcatgcccccaagcagggacgatgccactcctgtccgggatgagcccatggaagct
gattcggttgccttcaaacctgtttctgacaaggagaggaaagaaaagccgaaggcaaaa
gccgaaaaggggaagaggaaagtggaaggcactgctgctcccaagaaagacgtgccagca
aagcccgcaaaagcgccccaagagaaggctgaggccgaccgtgagaaggccgaggccgac
cgggcagagcctcctcccacgaagaaagtcaaggaggagctgcccaaggctgatcctgcc
aagtcctcgtcgtcctctcaaaaagaggagaagcccgttagcaccccacggaaagttcac
ccacgagctaccaaagagcatcccgacacccggtcagtcaaggaggagaaagccaagaag
gagcaccccaaggaggtcaagcaggagaagccatcgagcaaagaggaccggtcgaagaag
cccgtggacaaaaacaaacctgtggatgcaaagccggaaaaaaggaaaaggaaagccgag
gaaaaagcggagaaggatcatgacaccacgtcacagaaaacttccaagcaggaagtgaca
gagctgaaaccgtctccaaaggggaaaactgagccagagggagaaaaagctgagaagact
cctgagaaggagaagacggtttcgccagtggctccggcaaaaaagatcaagctgaaccga
gaaactggcaaaaagattgtcggcaccgaaaacatccctcccgttaaagacactcttgct
gagaaacctgagccagctaatagcaaagtgaagcaagaaaagaccaaaggaaagctgagg
agaaaagtggctgcagcggatgggtctggctcgatgctggtggattataccagcacaagt
tccgctggaggcagccccgtgcgaaagtcggaagacaagctagacacaaagcgaaccgtc
attaagacgatggaggagtacaacaacgacatcatcacggctcctcctgaagatgtcatc
attatggtccaggtccctcagtccaagtgggacaaagatgactttgattccgaggaggag
gaagacaaggccggggaggaagagaataaatctgggcaggttccttccgccattgggaag
cctgcgagcgttgtcaagaacgtcagcacaaagccatctaaccccattaaacacaacgag
aaggatcccgagcctttagagaaaagccagagagccacaaaagaatctgggcgtgagagt
tcacagccagactccagaagctccaaagccacaacgtccaatgagaaagggaaagccaaa
gaccgggatcacgctgcctccgacagagactcctctgagaagaggaggagtggagccccg
ctggagaaggagcgctcggagcgcagtgccgagcaaagcagcctgaagagcggccctccg
cactcctcgtgcaaggagagccggtcttccgaaaagcacgactcggcacacagttcttct
gccaaggacttcactccaaacagggacaaaaagtccgaccacgacagcagcagagaccac
tcaggctccaagcgaagagacgaaaggagcgaacttgcccggaagaagctctcgccttct
cggagccgggaatctgctgcctctgggcagaagaataagccccgagaggagcgggcggac
ctacccagaagggaagccggggactcccggtggagcagctacagccctccgagagaccgg
cggcagagtgagcacaaagcggcctacgaatcccggcattcctccgcggaacaccacaag
tcccaggagagaggctccggcaaagagagagagaagcgcccctcgtcggagacgaagagc
ggcaaagagagggtgccggcggggagcaagcccttgcacaggcactgctcgccagaggcc
agagaacaagggcctgtcccgaacgacaggggcgctgccaaaccaaagcctcagcccagc
cactcttcccggctcgcctctgacccgacccgagaaacagatgaggctgcttttgtcccc
gactacaatgaaagtgacagtgacagcaacgtctctgcaaaagaggaggattccccctca
gggagagctgcccgggaggggaaggagaaggagaaggccgctgacaagccgaaggagact
gccgtggtggtggcggcggcggctgctgcagcagcaccgtctgctgcccagcctggccgg
agccagagccagagcagccccagcctcagccccagcccctcggagagccagggccgcagc
cgcagcagcagcgccagctccgcagacagccaggacagcaagaagaagaagaagaagaag
gacaagaagaagcacaagaagcacaaaaaacacaagaagcataagaagcacgccgccgca
acggagtcggaagtggagcggagccaaaaacacaaacacaagaagaagaagtcgaagaag
agcaaagacaaggagcgggagaaggagaaaggagaggaccaaaaagccaaggctgtgact
gtctag
DBGET
integrated database retrieval system
