Hemicordylus capensis (graceful crag lizard): 128336476
Help
Entry
128336476 CDS
T08891
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128336476 (TNRC6A)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128336476 (TNRC6A)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128336476 (TNRC6A)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128336476 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
128336476
NCBI-ProteinID:
XP_053132156
LinkDB
All DBs
Position
13:complement(576854..617785)
Genome browser
AA seq
2070 aa
AA seq
DB search
MLGMATGRPGSASRRGGADTSGAGRQLGRGVSSVREAGNGGWAGGGDRGGLVVPVPEKEA
AAAAAAAGRGRHPAPAAARAPQPRRAGPGPKRLGPPPAAAAGRSPPPPPCEAPRPAEAHR
PRPKHMRVLEAKATKEAERKFSRELVQEEEEQLMEERKKKKDDKKKKDGAQKKATEQKSK
VPEPAKPSTSQPLSAASTTGPSPAASGGGNNAKRAAGSHQQPPAQQPQPSPRYPPREVPP
RFRHQEQKQLLRRGQPLPGIIANLGPASKLLNGQAGGSAGASDPPVAGGEGQSSSSSSRK
QAGMPPIRDLVSHSPNQSDLNHSTLGSHYENSHWGTVSSSSDSSTNWDKVIVDGLDKEAW
PVATGSDSELASECLDSDSASSSGSERNLTIMTSGGPGGEIGSLRNGQVPQTKFGNSSNS
NNVGTGSIARPWSLSLSTMMSTCTTSPDASSSISESSNNRPNAWGSLSSSSHGGLNPSTL
NSNSNHGAWPVLESNGLALKGPGGGGASGTGVGQLAHNQSLGSSWGSLQENCDSQANGTR
KVSRRGQPQNLNPEVNGPNNNTTNSMPSSLPNPAGPMQATEPASSHPPGPGAWAGGSAKS
GRPQLPAAPAPSGPSAAHLSNGEAKAGRARGAVWSACSSDFSGDQCSDPNSQANSDTVNA
TLMQPGLGGGSSSSGSGSMNFEINGNKGAGAWEVAAGGPAQSTQWAGGPESGPGGGRRGW
GSAVPGSNPADGEWSKLPSNPPPSGGTNGNVKKFTQGWKSAEGESASVGLQGPAAAQLME
QNGGWTKASPGESEGRAGSPEERSAADGASHERRRVDQHALLQSIVSRTDLDPRVLSNSG
WGQTPIKQNTAWDTEVTPRGEKKADNGTEAWGGCVAQACGAVERASLNGSGDASSGPGWG
EPKSAPPRWGDAKVPSSQGGWEEGSAAAAAAAPAKGSRSWGSGQGDRPAPSPWSDAEKLK
QGWAEGPKAGPGWGAPAVDSWGENLRSNHWGEVKKSSSGSSDSDKSASGWNEPSKAGSVH
WGAAGGGGSKPSARAGWEEPAKPSQSQGWGEAPKPPGSPDWDRPQEVGCWGAQPAPSKPP
GGGWLGGPVPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKKVNLWNKNS
LDSSGRPDQQAQGQQQLLPSSAVVDVGGGGGGGSSGWGEPSPAPAAVDNGTSAWGKPVDT
GASWGESVGDAASTSSWGHASVGQQASHKPGSKSMQVPDGWCGGDMPLTGSHQASWEEEE
DVEIGMWNSSSAQDVHASAHWPLYSKKMPSKGTMKTGNKQDESWLNPFVKQFTSLGFPRE
LPEETLQSNKMDISGGILPDKRMELEKHSLNVGEYSRVVGKGPGSRPPISKESSMDRSPY
FDKDGLVVADDSQTMQFMSSQSTKFPPSNSALPNQALPGSLPGLGIQNLSSVRQNGNPSL
FGSSAAQSWSTQQSPAPPLSSSQPNPRAQVPPPLLSPQVPVSLLKYAPSSGGLNPLFGPQ
QVAMLNQLSQLNQLSQISQLQRLLAQQRKVQSQRNGSAGGRQEQQSRSLNMQQQMMQQSA
QLDPNLLMKQQQQQQQLHPPAMKSFLESAVPHANPELPKGPLQINAFSNFPIGLNSNLNV
SVDMGSIKEPQSRLRKWTTVDSISANTSFDQNASKSGAISGGFRLEETPFVPYDFMNSSS
SPASPPGSVGDGWPCAKSPNGSSNVNWPPEFRPGEPWKGYPNIDPETDPYITPGSVTNNL
SINTVREPDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYSVPLSSTAQSTSSARNSDSK
STWSPASMNNTSLAHELWKVPLPPKSITAPSRPPPGLTGQKLPLSTWENSMRLGGVWSHS
EARYTPGSSWGESSSGRITNCLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALV
RYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQGQSLSPSPAWQSLGSSQSR
LGSVDSSHAFSNRNDLNHHWSGTGLSGASNVGDLHAMSLWGSPNYSSSLWGSLGGGGGGG
GGSNPRGLGSPSPLNAFLSVDHLGAGGESM
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atgttggggatggcaacggggcgccccggaagcgcttctcggagaggcggggcggatact
tccggggcggggcggcagctcggccggggagtctcctccgtgagggaggctggaaatggc
ggctgggcggggggaggcgaccgcggcggcctcgtcgtcccagtcccagagaaggaagca
gcagcagcagcagcagcagcaggccgaggccgccaccctgcccccgccgccgccagggcc
ccccagccgcgccgcgccgggcccgggccgaagagactaggcccgccgccagcagcagca
gcagggaggtcgccgccgccgccgccgtgtgaggctccccggccggccgaggcccaccgc
ccgcgccccaagcacatgcgagtgttggaagctaaagctaccaaagaagctgaaagaaaa
tttagcagggaattagtgcaagaagaggaagaacagttgatggaagaaaggaaaaagaag
aaagacgacaagaagaagaaagacggtgctcagaagaaggccactgaacaaaaaagcaaa
gtgccagaaccagccaagcccagcaccagccagcccctctctgccgcctccactaccggt
ccttccccagcagccagcggcggcggtaataatgccaagcgggctgcaggcagccatcag
cagccgccagctcagcagccgcagccctcgcctcgctacccgccccgcgaggtcccgccc
cgtttccggcaccaggagcagaagcaactcttgagacgagggcagccgctgccagggatc
attgccaacctggggccagcgtccaagctgctgaacggccaggccggagggagcgctggg
gcgagcgacccgcccgtggctgggggagaagggcagagcagcagcagcagcagcagaaag
caagcaggcatgccacccattcgggacttggtcagccactcccctaaccagtcagatctg
aaccacagcacactaggatcccattatgagaactcgcactggggaacagtttcttccagt
agtgactcgagcacaaactgggacaaagtcattgtagacggcttggacaaggaggcctgg
cccgtggccacaggcagtgactcggagctggcttcagaatgtctggacagtgactctgcc
tcgagttccgggtcagagaggaacctgacgatcatgacgtccgggggccccggtggtgaa
atcggcagcctgcggaacggccaggttcctcagaccaagtttggcaacagtagcaacagc
aataacgtgggcaccggaagcattgcccggccatggagcctgtcccttagcaccatgatg
agcacatgtacgacttctccagatgcttctagcagcatctctgaaagtagcaacaacagg
ccgaatgcctggggctccctcagttcttcttcccacggaggattaaatcccagcactttg
aattccaacagcaaccacggtgcctggcctgtcttggagagcaacgggcttgccctgaaa
gggcccggaggcggcggggccagtggcacaggggtcggccagctggcgcacaatcagagc
ctgggcagctcctggggcagcctccaggaaaactgtgattctcaagcaaacggtacaagg
aaggtttcgcggcgtgggcaacctcagaaccttaatcccgaagtgaatggaccaaataat
aacactacgaactctatgccttctagtttaccaaaccctgctggtccgatgcaggcgact
gaaccggcgagcagtcaccccccggggcccggggcctgggccggcgggagtgccaagagc
ggccgcccgcagctcccggctgctccggcccccagtggcccctccgctgctcacctgagc
aatggggaagccaaagccggcagagcgcggggcgccgtgtggagtgcctgcagctccgac
ttctccggggaccagtgttcagacccaaacagccaagccaacagtgacactgtgaatgca
acgctaatgcagcctggactcggcggggggagcagcagcagcggcagcggcagcatgaac
tttgagatcaacgggaacaaaggagcaggggcctgggaggtggcggcggggggccctgcc
cagagcacacagtgggcggggggccccgagtcaggccctggaggaggtcggagaggctgg
ggcagtgctgtccccggcagcaacccggccgacggagagtggagcaagctgccaagcaac
ccgcccccctctgggggcacgaacgggaatgtcaagaagtttacacaggggtggaagtcc
gcggagggggagagcgccagtgtcggccttcagggtcccgcagcagctcagctcatggag
cagaacggcgggtggaccaaagcgagtcccggggagagcgaaggccgtgccgggagccct
gaggagagaagcgccgcggacggggcgagtcacgagaggaggagggtggaccagcacgca
ttgctgcagagcatcgtgagcagaaccgatctggacccgcgggtcctttccaactctggt
tggggacagactcccatcaagcagaacactgcctgggacacagaggtgaccccccgaggg
gaaaagaaggctgacaatgggaccgaggcctggggaggctgcgtggcccaggcttgcggg
gctgtggagcgagccagtctcaacgggagtggcgacgcctcctctgggccggggtgggga
gagccaaaatctgcgccgcccaggtggggggatgccaaggtccccagcagccaggggggt
tgggaggagggctctgctgctgctgctgctgctgccccagccaaaggcagccggtcctgg
gggagtggccaaggggaccggcccgccccatcgccctggagcgatgccgaaaagctcaag
caggggtgggcagagggacctaaagcaggcccggggtggggggctccagcggttgacagc
tggggggagaacttgaggagcaatcattggggggaggtgaagaagtccagctcgggcagc
agcgacagtgacaagtcggcatctggctggaacgagcccagcaaggctggctctgtgcac
tggggagccgctggtggtggtggcagcaagccaagcgcccgtgctgggtgggaggagcct
gccaagccgagccagagccagggctggggggaggcacccaagccgcccggctccccagac
tgggacagaccgcaggaggtggggtgctggggtgctcagcccgcccccagcaagccccca
ggcggggggtggctgggtggaccagtgccggccccagccaaggaagaagagcccaccggc
tgggaggagccctccccggaatccatccgccgcaagatggagattgatgacgggacttct
gcttggggggatccgagcaagtacaactacaagaaggtgaacctgtggaacaagaactcc
ctggacagcagcggccgtccagaccagcaagcacaaggacagcagcagctcctgccttcg
agcgccgtggtggacgtgggaggcggcggcggcggcggcagctccggttggggggagccc
tctcctgcacccgctgcggtagataatggcacatcggcctggggcaaacctgttgacact
ggggcaagctggggggagtctgttggagacgcggcgagcaccagttcctgggggcatgca
tctgttggtcagcaggcttctcacaaacctggatcaaagtctatgcaagttccagatggc
tggtgtgggggcgacatgcccctgacaggaagccatcaggccagctgggaggaagaggaa
gacgttgagattggcatgtggaacagcagctcagcacaagacgtgcatgcttctgcacac
tggccgctgtactcaaagaagatgccttctaagggaaccatgaaaactggaaacaagcaa
gatgaatcatggctcaatccatttgtcaagcagttcaccagccttggcttccctagagaa
ctgccagaagaaaccttgcagagcaataagatggacatatcgggagggatcttgcctgac
aagcgcatggagctggagaagcacagcttgaatgttggcgaatacagccgggtggtaggg
aaaggccccggctcccgtcctccgatttccaaagagtcttccatggatcgaagtccttat
tttgataaggatggtcttgttgtagcagatgattcccaaaccatgcagtttatgtccagt
cagagcacgaagttccccccttcaaacagtgcactacctaaccaggccctcccaggctcc
ctcccagggctgggcatacaaaacttgagttctgttagacagaatggcaaccccagcctg
tttggcagctcggcagcacagtcctggagcacgcagcagtctccagccccgccgctcagc
tcctctcagccgaacccacgtgctcaagtgcctcctccgctgctctcccctcaggtcccc
gtctccttgctgaagtatgcgccaagcagcgggggcctgaacccactcttcggcccgcag
caggtagccatgctgaaccaactctcccagttgaaccagctttctcagatctcccagctg
caacgattgctggcccagcagaggaaggtgcagagtcagagaaacgggtctgctggtggc
cgtcaggagcagcagagtcgctccctcaatatgcagcaacaaatgatgcaacaatctgct
cagctggatccaaacctgcttatgaagcagcagcagcagcagcagcagctccatccaccc
gccatgaagtccttcttggagagtgccgtgccccatgccaacccggagctgccgaaagga
ccattgcagatcaatgcattcagcaactttcctataggactgaactcaaacttgaacgtc
agcgtcgatatgggcagtattaaggagccacagtcccggctgaggaaatggacgactgtc
gacagtatttccgccaacacatcatttgatcagaatgccagcaaaagcggtgctatttcg
ggtggcttcaggctggaggaaacgcccttcgttccctacgacttcatgaacagcagcagc
tcgccagccagtcctcctggatccgttggggatggctggccatgtgccaaatcacctaac
ggttctagcaatgtcaactggccgccagagtttcgtcctggtgagccgtggaaaggttat
ccaaacattgaccccgaaactgacccctacatcactcccggcagcgtcacaaacaatctg
tcaattaacactgtgcgggagcctgaccacctcagggacaggaacagtgggtcctcctca
tctctgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaactac
agtgttcccctcagcagcacagcacaaagcacttcttcagccagaaacagtgactccaaa
tccacgtggtctcctgcttccatgaacaacacctcgctggctcatgagctgtggaaggtc
cctctgccacccaagagcatcaccgccccctcccgcccgccccccggcctgactgggcag
aagctgcccttgtccacctgggagaactccatgcggctggggggcgtctggagccattcc
gaggccagatatacccctggttcgagctggggcgagagcagctcagggagaataaccaac
tgtcttgtcctgaaaaacctcacacctcagatcgatggctccaccctgcggactctgtgc
atgcagcacgggccactgatcacattccacctgaacctcccccacgggaacgctttggtc
cgctacagttcaaaagaagaggtggtgaaggcgcagaaatctctccacatgtgcgtcctc
gggaacacgaccatccttgccgagtttgccagtgaagaggagatcagccgcttctttgca
caaggccagtctctgagcccctcccctgcctggcagtccctgggcagcagccagagccgc
ctgggctccgtggacagctcccacgccttctccaaccgcaacgacctgaaccatcactgg
agtggcactgggctgtccggagccagcaatgtgggggacctccacgccatgtccctgtgg
gggagccccaactattccagcagcctgtggggctccctgggcggcggtggcggtggtggc
ggcggcagcaacccccggggcctgggcagcccatccccactcaacgccttcctctccgtt
gaccatcttggggcagggggggagtccatgtag
DBGET
integrated database retrieval system
