Hemicordylus capensis (graceful crag lizard): 128336483
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Entry
128336483 CDS
T08891
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04120
Ubiquitin mediated proteolysis
hcg04137
Mitophagy - animal
hcg04144
Endocytosis
hcg04340
Hedgehog signaling pathway
hcg04350
TGF-beta signaling pathway
hcg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128336483 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128336483 (SMURF1)
04350 TGF-beta signaling pathway
128336483 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128336483 (SMURF1)
04137 Mitophagy - animal
128336483 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
128336483 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128336483 (SMURF1)
04121 Ubiquitin system [BR:
hcg04121
]
128336483 (SMURF1)
03029 Mitochondrial biogenesis [BR:
hcg03029
]
128336483 (SMURF1)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128336483 (SMURF1)
Membrane trafficking [BR:
hcg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128336483 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
128336483 (SMURF1)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
HECT type E3
128336483 (SMURF1)
Mitochondrial biogenesis [BR:
hcg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128336483 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
128336483
NCBI-ProteinID:
XP_053132181
LinkDB
All DBs
Position
13:complement(18386689..18453833)
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AA seq
753 aa
AA seq
DB search
MSNAGTRRTGSSIKVRLTDRKVYNPAVTLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQC
HSTDTVKNTLDPKWNQHYDLYVGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRL
KDTGYQRLDLCKLNPTDTDAVRGQIVVSLQTRDRIGTGGTVVDCRGLLENEGTVYEDSGP
GRPLSCYMEEPAPYSDSTGAAGGGNCRFVESPSQDQALQGQRLRTPDVRGHVQTPQNRPH
GHQSPSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWE
VRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPNQPLPVPSEGSLEDSEELPAQ
RYERDLVQKLKILRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKF
RGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPLTSNTQVKD
HLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILE
NDITPVLDHTFCVEHNAFGRILQHELKPNGRNVSVTEENKKEYVRLYVNWRFMRGIEAQF
LALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQ
AVEAFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHT
CFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgcagggacgcggaggaccggctcgagtatcaaagtccgcctcacggacaga
aaggtgtacaacccagctgtgactttgacagtgctttgtgccaagaaccttgcaaaaaaa
gattttttcaggcttcctgacccatttgcaaaggtcgtggtggatgggtccggccagtgc
cactccactgacactgtgaagaacacattagatcccaagtggaaccagcactatgatcta
tatgttgggaagtcagattctatcaccatcagtgtttggaaccacaagaaaattcacaaa
aaacagggagctggcttcctgggatgtgtccgacttctttccaacgccatcagcaggcta
aaagataccggataccagcgtttggatctatgcaaactaaaccccacagatactgatgca
gtacgaggccagatagtggttagcttacagacacgggacaggataggtacaggggggact
gttgtcgactgcagggggctgttggagaatgaaggaacggtttatgaagactcaggacct
ggaaggccgctgagctgttacatggaggagccggccccatacagtgacagcacaggtgcc
gctggaggagggaactgtagatttgtagaatcccctagccaagaccaggccttgcagggg
cagcgcttgcggactcctgatgtgagaggccacgtacagacgccccagaacaggccgcat
gggcatcagtcgccatcaccagacctgcctgaaggctatgaacaaaggaccacagtacag
gggcaagtttactttttacatacacaaactggcgttagcacatggcacgaccccaggata
ccaagagaccttaacagtgtgaattgtgatgaacttggacctctaccaccaggttgggaa
gttagaagtacagtgtcgggaagaatatattttgtagatcataacaacagaaccacacag
tttacagacccgagactgcatcacatcatgaatcaccaatgccaactaaaagaacccaac
cagcctttgcctgtgccgagtgagggctccttagaagacagtgaggagttgcctgcccag
aggtacgagcgtgatttggtgcagaagctgaagatccttcggcacgaactctctctccag
cagccccaagctgggcactgccgcatcgaagtatcaagggaggagatatttgaggaatct
taccgtcagataatgaagatgaggccaaaagacctgaaaaaaaggctgatggtgaagttc
cgaggagaagagggcttggattatggtggagtggcaagggagtggctgtaccttctgtgc
catgagatgttaaacccctattatggactcttccagtactccacggataacatttatatg
ctgcaaatcaatccagactcctctatcaatcctttgacatcaaatactcaggtgaaggat
catctttcttacttccactttgttggtcggataatgggtctggctgtgtttcatgggcac
tacatcaacgggggtttcacagttcctttctacaagcagctgctgggcaagcccatccaa
ttatccgatttggagtcagttgacccagaactacacaagagtttagtttggattttggaa
aatgatatcaccccagttctggaccataccttctgcgtggaacacaatgcttttggcagg
atcctacagcacgagcttaaaccaaatggccgaaatgtttccgttacagaggagaacaag
aaagaatatgtcaggttgtatgttaactggcggttcatgagaggaattgaggcccagttc
ctggctcttcagaaaggttttaacgagctgattcctcaacacctactgaagccttttgat
cagaaggagctggagctcatcataggaggcctggacaagatcgacttgaacgactggaag
tccaacacccggctcaagcactgcatggcagacagcaatattgtcaagtggttctggcag
gcggtggaagcctttgacgaggagaggagggccaggctgctgcagttcgtgacaggctcc
acaagggtgccgcttcagggcttcaaggcgttgcaaggttctacaggcgcggcaggcccc
cggctcttcaccatccatttgatcgatgcaaatacggacaaccttcccaaagctcatacg
tgctttaaccgaattgacattccaccttatgagtcctacgagaagctttatgaaaagctg
ctgacagctgtggaagagacctgtgggtttgcagtggagtga
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integrated database retrieval system
