Hemicordylus capensis (graceful crag lizard): 128336490
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Entry
128336490 CDS
T08891
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg00260
Glycine, serine and threonine metabolism
hcg00630
Glyoxylate and dicarboxylate metabolism
hcg00670
One carbon pool by folate
hcg01100
Metabolic pathways
hcg01200
Carbon metabolism
hcg01230
Biosynthesis of amino acids
hcg01240
Biosynthesis of cofactors
hcg04981
Folate transport and metabolism
Module
hcg_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128336490 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128336490 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128336490 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128336490 (SHMT1)
Enzymes [BR:
hcg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128336490 (SHMT1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
FF
Motif
Other DBs
NCBI-GeneID:
128336490
NCBI-ProteinID:
XP_053132221
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Position
13:complement(3235241..3257565)
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AA seq
484 aa
AA seq
DB search
MASLANGDHLSKALWASHNKMVMEPLDTNDPEVHEIIKKEKRRQRVGLELIASENFASRA
VLEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALEAYGLDPQKWGVNVQPYSG
SPANFAVYTGLVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPETGY
IDYDRLEENARLFHPKLIISGVSCYSRNLDYARMRKIADENSACLMADMAHISGLVAAGV
VPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGARSVDPKTGKEILYNLESLINQAVFPGL
QGGPHNHAIAGVAVALKQAMTPEFKAYQKQVVANCKALAKTLIGLGYHVVTGGSDNHLIL
VDLRNQGTDGGRAERVLELCSIACNKNTCPGDKSALRPSGLRLGTPALTSRGFLEGDFQK
VAHFIHKGIELTLQVQHDMSPKATLREFKEKLVSDEKYQAALKSLKEEVEVFADSFPIPG
LPVL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccagccttgccaacggagaccacctcagtaaggctctctgggcctcccacaataag
atggtgatggaaccgctggacaccaacgacccagaggtccacgagatcatcaagaaggag
aagcgaaggcagcgggtgggcttggagctgatcgcctctgagaactttgccagccgagcc
gttctggaggccctgggctcatgcatgaacaacaagtattcggagggatacccaggacaa
agatactatggcgggacagagtttgtggatgagttggagagactgtgtcagaagagagcc
ctggaggcctacgggctggatccacagaagtggggagtcaacgtccaaccctactcaggg
tcccctgccaactttgcagtctacactggtctggtggagccccatgggaggatcatgggt
ttggatttacctgacgggggtcacttgacccacggcttcatgacggacaagaagaagatc
tcagccacttccatcttctttgagtccatgccctacaaggtcaaccctgaaacgggttac
attgactatgacaggctggaggaaaatgctcgcttattccacccaaagctcatcatttca
ggggtcagctgctactcccggaatctggattatgcccgcatgaggaagatcgcagatgag
aacagtgcgtgcctgatggctgacatggcccacatcagcgggttggtggcagctggtgtg
gtgccgtcgcccttcgagcactgcgacgtggtctcgaccacaacccacaaaaccttacgc
ggctgccgagctggcatgatcttctaccggaaaggtgctcgcagtgtggatcccaaaaca
gggaaggagatcctctacaacctcgagagccttatcaatcaagctgtatttccaggcctg
cagggagggcctcacaaccatgccattgcaggggttgctgttgctctgaagcaagccatg
accccggaattcaaggcttaccagaagcaagtggtagccaactgcaaagccctggcaaaa
accctcatcggtttgggataccatgttgtgactggcggctccgacaaccacttgatcctg
gtggacttgcgcaaccaaggcaccgacggggggcgtgctgaacgggtccttgagctctgc
tcgattgcgtgcaacaagaacacctgcccaggggacaagagtgctttgcgtcccagtggg
ctgaggctgggcaccccagcgctgacctctcggggattcttggaaggggatttccaaaag
gtcgctcacttcattcacaaaggtatagaactcaccttgcaggttcagcatgacatgagc
cccaaagcaaccctgagggagtttaaggagaagctggtgtctgatgagaaataccaagca
gcgctgaagtccctcaaggaggaggtggaggtctttgcggattccttcccaatccccggt
ttacctgttctttaa
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