Hemicordylus capensis (graceful crag lizard): 128336644
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Entry
128336644 CDS
T08891
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04010
MAPK signaling pathway
hcg04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128336644 (CACNA1H)
04020 Calcium signaling pathway
128336644 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcg04040
]
128336644 (CACNA1H)
Ion channels [BR:
hcg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128336644 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
128336644
NCBI-ProteinID:
XP_053132591
LinkDB
All DBs
Position
13:complement(3471617..3957410)
Genome browser
AA seq
2566 aa
AA seq
DB search
MRSLQEECNHQLPGDIPIRPHHSIPPVAVAGKSPFEQLRGHKATTKLTQWQQLIELSVPS
HPEDAEIPDRVPAAIMTDGERREPFQPLASDEVRVPIASGTVPSQAPQPGEEQDEDALSA
CRSIQDSLASAGSSTQDPAHEGENQVPYPSLASTVFFCLDQTTRPRSWCLKLVCNPWFEH
VSMLVILLNCVTLGMFQPCQDDECDSERCTILEAFDHFIFAFFAVEMVIKMIALGIFGQK
CYLGDTWNRLDFFIVVAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLL
DTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDTNLQMTYNLTFLHPYYRTEEG
EENPFICSSHRDNGMQKCSSIPNRKEYKVECTLSMDSYNQNSYTLDFSHRNACINWNQYY
NICRTGDLNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLII
VGSFFMINLCLVVIATQFSETKQRENQLMKEQRARYLSNDSTIASFSEPGSCYDELLKYI
CHIFRKVKRRTLRLYNNWQSKRRKKVDPNSSDNGQGRRTKKRITSIHHLIHHHHHHHHHH
YHLSNGSPQGPRSNPEICDLELKVIKPGSQLMLPPSSPNLRAAPAADSESVHSIYHADCH
VEGAQMKCKSSNVTASIKLTNHGNMNYPTIMPSPANKASITPVSKGKKNDSESGGGSPVA
VVNSPAHLNVDSYGKLHHLVGEHGLCRTASRLSGLNMPCPLPSPQASMLSCELQNCPYCA
SILEDPEFEFSESDSYESGEDNNGVYEFTQDVRHGDQRDQIQQQRNKKKKKKKKKKPKEG
NKVTRLWRAFGNKLKWIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVF
TSMFALEMLLKLLAFGIWGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVL
KLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFGLKTDSGDTVP
DRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVA
ILVEGFQAEGDANRSDTDEDKTSINFEEDFEKLKELRASEMKLYSLAVTPNGHLEGKGSM
PPPIIMRTAATPMPTPRCSPHMDSVHPFVDSRRGSNASIDPLSFDQKSLSSLRSSPCANW
GTSSNWGSRRSSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDEAEDAKLSAVSRPPF
HRRAESLDCRGALELPELLQVPGVRHSLSVSPVAMVPTEYQDCNGKMVHVPSEFYLRMDG
HKDDPLDYDDDMEDNYCYRIRKALEPYKPEWCKTHEAWSLYLFSPQNRLRATCQRVIAHK
MFDHVVLVFIFLNCITIALERPDIDPNSTERIFLSVSNYIFTAIFVAEMLVKVVALGFFS
GENTYLQSSWNVLDGVLVFVSIIDIVVSMASAGGAKILGILRVLRLLRTLRPLRVISRAP
GLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGPDIRNVSTKTDCT
NAHHKWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPSQNHNPWMLLY
FISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKEIYMSE
AQRRPYYADYSPVRRYIHTLCTSHYLDLFITFIIGVNVITMSMEHFNQPKSLDEALKYCN
YVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTI
IRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGK
LDCSEDNPCEGLSRHATFNNFGMAFLTLFRVSTGDNWNGIMKDTLRECHRDDKHCLSYLP
VISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGVNTPVR
APDGSQAASKAGSPLLVQHRALEALNYEDVSLAIPNLDLLERGEDPLMAYASFRSSPRHH
LPTPSHRAAGGEAEEAAASFGAQREPQNLLTVRKISVARMHSLPNDSYMFRPVMPAKAPF
PLHEVELETYSYKSPRGSITSVRSQPVGTCSSLRVPREALHPTTPPPRHDHRDLWKLLPP
HAASRSPSLHRLLCRQEAIQRDTLEAPNADPKDRGQTEACENLPPPKKLCQSILGPPLLH
PTPSSLPGTPPLPHASPHRPSSVCTHKHTFSQHSIPSRPSSCNSDPDSSLFESSDLADEE
VSHINSSVRNWAEQLESGDPSDSPFSSPALSPAPLKNCSTTSLSGGISKEKDLKKFYSVD
TRGFLAKPGWADDQRRHSIEICPSIDDRECRFIESPEEKKRLPLHMPLEAEYIRGIRRKK
KMSPPCISIDPPMEEEGNASARTKASENSLLRRRTPSCESTAYRDSLELTESQPGDLASK
AERRALPACRGEHLTIPNFSFESSDPGSTSNLSDRLLEGGQAAPLSTDSRPDDASPLEMK
RVDHLKTQCGNPEENEELSGGTKSPLQKHGLVPVITATDEDLDKPV
NT seq
7701 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcctgcaggaagaatgcaaccaccagctaccaggtgatatcccgatccgtccc
catcacagcatccctccagtggctgttgcaggaaaatcaccttttgaacaactgagagga
cacaaagctaccaccaaacttacccagtggcaacaactgatagagctttccgtgccatct
caccctgaggatgcagagattcctgatcgggtgccggctgctatcatgactgatggcgag
aggagagagcccttccagccactggcgagcgacgaggtacgggtcccgatagcctccggc
acagtccccagccaggcaccccagcccggggaggagcaagatgaagatgcgctcagcgct
tgtagatccatccaggacagtctggcctcggcgggatcgtccacccaagatccagcccac
gagggagagaaccaggtcccttacccttccctggcctccacagtcttcttctgccttgac
cagaccacccggccacgcagctggtgcctcaaactggtctgtaacccctggtttgagcat
gtcagcatgctggtcatccttctgaactgtgtcacccttgggatgttccaaccgtgtcaa
gatgacgagtgcgattcggagaggtgcactatcttggaggcatttgatcactttatcttt
gccttctttgctgtggagatggtaatcaagatgattgctctgggaatctttggacagaag
tgttacctaggagacacctggaatcgcctggacttcttcattgtggttgccgggatgatg
gaatattctttggatggacacaacgtcagcttatctgccatccgtacggtccgagttctc
aggcctttacgagccattaacagggtgccaagtatgcgcatactggtcaccctgctgtta
gatactctgcctatgttaggcaacgttcttctcttgtgcttctttgtctttttcatcttt
gggatcgtgggtgtccagctctgggccgggctgctgaggaacagatgtttcctagacacc
aaccttcaaatgacatacaacctgactttcctgcacccgtactatcgcacggaggaaggg
gaggagaatccattcatctgctcgtcccaccgggataatggcatgcagaaatgttccagc
atcccaaacaggaaggagtacaaggtggaatgtactttgagcatggactcctacaaccaa
aactcatatactctggacttcagccaccggaacgcctgcataaactggaaccagtattac
aacatttgcaggacgggggatctaaacccgcacaatggagctattaattttgataatatt
ggctatgcttggatagctatttttcaggttataaccctggaaggatgggttgacatcatg
tattatgtcatggatgcgcactctttttacaattttatatattttatactacttataata
gttggttctttcttcatgattaacttgtgcctggttgtgatagcaacacagttttctgaa
acaaaacagcgggagaaccagctaatgaaggagcagcgggctcgctacctctcgaacgac
agcacaatcgccagcttctccgaaccgggaagctgctatgatgaactcctcaaatacatc
tgccacattttcaggaaagttaaacggcggactttgcgcctctacaacaactggcagagc
aaacggcggaaaaaggtcgaccccaacagcagcgacaatggccaaggccgccggaccaaa
aagcggattacctccatccaccacctgatccaccaccatcaccaccatcaccaccaccac
taccatctcagcaacgggagcccccaagggccacgctccaaccctgagatctgtgatcta
gagctgaaggttatcaagccggggagccaactcatgctgcctccgtcgtcccccaacctc
cgggccgccccagcggcggattcggagtctgtccatagcatttatcatgccgactgccac
gtggaaggggcccagatgaaatgcaagtcttccaacgtcacggcgagtatcaagcttacc
aatcacggcaacatgaactacccgaccatcatgccttccccagccaacaaagccagcatc
accccagtgtccaaagggaagaaaaatgatagcgaaagtggaggtgggtctcctgtggcc
gtggttaacagcccagcacatctgaacgtggattcctatggaaagctccatcatttagtt
ggagaacacggtctttgccggacagccagcagactctctggcttgaacatgccatgccca
ctgcccagcccacaagccagcatgctgagctgcgagctccagaactgcccctactgtgcc
agcatcctagaggaccctgagttcgagttcagcgagtcagatagctatgagtctggtgaa
gacaacaatggggtttatgagtttacgcaggacgtgagacatggggaccaaagagaccag
atccagcagcagaggaacaagaagaagaagaagaagaagaagaagaaacccaaggagggg
aataaagtcaccagactctggagggcctttggcaacaagctgaagtggattgtggagagc
aagtatttcaaccgggggattatgatcgccatcctcatcaacacactgagcatgggcatc
gagtatcacgaacagccagatgagttaaccaatgctctggagatcagcaacattgtcttc
actagcatgtttgccctggagatgctgctcaaactgcttgcctttggcatctggggttac
atcaagaacccgtacaacatttttgatggcatcattgtggtgatcagtgtctgggagatc
attggccagtcagacggtggcctttctgtgttgagaacgttccggcttctcagggtcctc
aagctagtacggttcatgccagcgctccggcggcagctggtagtcctgatgaagaccatg
gacaacgtggccaccttctgcatgctgctcatgctcttcatattcatcttcagcattctc
gggatgcatctttttggatgcaagtttggcttgaaaacggactcgggggacacggtgcca
gacagaaagaactttgattccttgctgtgggcaattgtgactgtgtttcagatcctcact
caagaggactggaacgtggttctctacaacgggatggcctccacttcttcctgggcagcc
ctctacttcgtcgctctgatgactttcggcaactatgttctcttcaacctcctggtcgcc
atcctggtggaggggttccaagctgagggtgatgccaacaggtctgatacagatgaggac
aaaacatccatcaactttgaggaggattttgagaagctgaaagaacttcgtgcttctgag
atgaagctgtactctcttgcggtcactcccaatggccacctggagggcaagggaagcatg
cccccacctatcatcatgcgcactgctgccacacccatgcccaccccaaggtgttcccca
cacatggattctgtccacccctttgtggactccagacgaggaagcaacgcttcgatcgat
ccgctgagcttcgaccaaaagtccttgtccagcctccgcagctccccctgtgcaaactgg
ggcaccagcagcaactgggggagccgccgttcgagctggaacagcctgggacgggcgccg
agcctcaagaagaagaaccagtctggggagcgggagtccctgctttctggggaaggcaaa
ggcagcacggacgatgaagcggaggacgccaagctcagcgccgtcagccggccacctttt
caccggcgggcagagtccctggattgccgcggggccttggagctgccggaactgctccag
gtgcctggtgtgcgccactctctgagtgtcagtcccgtggccatggtgcctaccgagtac
caggactgcaacggcaagatggtgcatgtgcccagtgagttctatctgcgcatggacggc
cacaaggacgacccacttgactacgatgacgacatggaggataactactgctaccggatt
cgcaaagccctggagccctacaagccggagtggtgcaagacgcacgaagcctggtcgctc
tatttgttctcccctcagaatcggctccgtgccacatgccagagggttatagcgcacaag
atgtttgaccacgtggttctcgtcttcatcttcctcaattgcataaccattgcattggag
aggccggatatcgaccccaacagcacggagcggattttcttgagcgtatccaactacatc
ttcactgccatctttgttgctgagatgttggtcaaggtggtggccctcggcttcttctcc
ggggaaaacacctatctccagagcagctggaatgtcctggatggagtcctggtctttgtc
tctatcattgacatcgttgtttccatggcctcggcaggcggagcaaagatcttggggatc
cttcgagtgcttcgtttgctgcgcaccttaaggcctttaagagtcatcagcagagcgcca
gggcttaaacttgttgtggagaccctcatttcctctctcaggccgatcggcaacatcgtg
ctcatctgctgcgctttcttcatcatctttggcatcctgggagtgcagctctttaaaggc
aaattctactactgtgaagggcccgatatccgaaatgtctccaccaaaaccgactgcacc
aacgctcaccacaagtgggtccggcggaagtacaattttgacaacttggggcaggctctg
atgtctctgttcgtcctctcctccaaagatggctgggtgaacatcatgtatgatggactg
gacgccgtgggcatcgaccagcagcccagccagaaccacaacccctggatgctcctctac
ttcatctccttcctcctcatcgtcagcttcttcgtgctcaacatgttcgtcggggtggtg
gtggagaatttccacaagtgccggcagcaccaggaggccgaggaggcccggcggcgggag
gagaagcgcctgcggcggctggagaaaaagcgcaggagtaaggagatatacatgtctgaa
gcccaacggcgtccatactacgcagattactcgcctgttcggagatacatccacacgctc
tgcaccagccactatctggatctcttcatcacctttatcattggtgtcaatgtcatcact
atgtcaatggaacacttcaaccaacccaagtcgctggatgaagcattaaagtactgcaac
tacgtgttcaccatcgtgttcgtatttgaagccgtgttgaagctggtagcatttggattc
cggagattctttaaagacagatggaaccagctggatctcgccattgttctcctgtcaatc
atgggcatcaccctggaggaaattgaaatgaatgctgcgctccccattaatcccaccata
atccgcatcatgagggtgctccgaattgcaagagtcctgaagctgctcaaaatggccaca
ggaatgcgagcattgttggacacggtggttcaagctctcccccaggtaggaaaccttggc
ctgcttttcatgctcctgtttttcatctatgctgccctgggagttgaattatttggaaaa
cttgactgcagcgaggataacccttgcgaaggcctgagccggcacgcgaccttcaacaac
ttcggcatggccttcctcaccctcttcagggtgtcaaccggggacaactggaacgggatc
atgaaggacaccctccgggaatgccaccgggatgacaagcactgcctgagctacctgccc
gttatttcccccgtctactttgtcaccttcgtcctcattgcccagttcgtgctggtcaac
gtggtggtggccgtcctgatgaaacacttagaggagagcaacaaggaggccaaggaggat
gccgagatggatgccgagattgagctggagatgtccaggggggtcaacaccccagtgagg
gccccggatggcagccaggcggcgtccaaggcaggctcccctctgcttgtgcagcatcgg
gcactggaggctctgaattatgaggatgtgtctctagccatccccaacttagatctgctg
gagagaggggaggatcccttgatggcgtatgcatccttccgctcttctcctcgccaccac
ctcccgactccttcccacagagctgcaggcggagaggccgaggaagctgctgcgagcttt
ggggctcagagggaaccccagaacctccttacagtccgtaagatctccgtggctaggatg
cattccttgcccaacgacagctacatgttccgccctgtgatgccggccaaagcccccttc
ccactccatgaagtggagctggagacctactcatataagtcgccaagagggtccatcacc
tctgttcgctcccagcctgtggggacttgctcctctctgagggtgccacgcgaggccctt
catccaaccaccccacctccccgtcatgaccacagggacctctggaagctcctgccccca
cacgctgcctcgcgctcccccagcctccacaggctgctgtgcagacaggaggccattcag
agagacactttggaggccccaaatgcagatcctaaagaccgagggcaaactgaggcctgc
gagaacttgcccccaccaaagaagctgtgtcagagcatcttgggcccgcctctgctgcac
cccacaccctcgtctctccccgggacacctcctcttccccatgcttcaccccacaggccc
tccagcgtctgcacccataagcacaccttcagccaacacagtattcccagcaggccttcc
agttgcaacagcgacccagacagctctctttttgagtcctcggacctggccgatgaagag
gtcagccacatcaacagctctgtaagaaactgggcagagcagctggagagcggagacccc
tccgactctccattctcctctcccgccctgtcacccgcccccctcaagaactgtagcaca
accagcctatcggggggcatcagcaaagagaaagacctgaagaagttctacagtgtggac
acacgaggattcttggccaagccaggctgggcggatgaccaacgaaggcactccatcgag
atctgtccatccatcgacgatagagagtgtcgcttcatcgagtcaccggaggagaagaag
aggcttcccctccacatgccgctggaggctgagtatatccgtggcatacggcggaagaag
aagatgagcccaccttgcatttctatagatcctcccatggaggaagaaggcaatgcgtcg
gcacgtaccaaagcatctgagaacagcctgctgaggagaaggaccccctcgtgtgaatcc
actgcctacagggactccttggagctgactgagagccagccaggagacctggcctccaag
gccgaacgccgggccctgcccgcctgccgaggtgagcatctgacaatccccaacttctcc
tttgagtcgtctgaccctggctccacgagcaacctctcggaccgccttttggagggtggc
caggccgcacccctctctacagattcccggcccgacgacgcctcaccgctagaaatgaaa
agggtggaccatttaaaaactcagtgtggcaaccctgaggagaacgaagagctttcgggt
gggaccaagagccccctgcagaagcacggactggtccccgtgatcacagcgacagacgaa
gaccttgacaaaccagtatag
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integrated database retrieval system
