Hemicordylus capensis (graceful crag lizard): 128337011
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Entry
128337011 CDS
T08891
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128337011 (DENND4B)
Membrane trafficking [BR:
hcg04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128337011 (DENND4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
SPA
PPR_long
PPR_3
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
128337011
NCBI-ProteinID:
XP_053133425
LinkDB
All DBs
Position
14:13201474..13239516
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AA seq
1495 aa
AA seq
DB search
MAEEWAPQLVDYFVVAGLSDTSKPLEDESQLLRPSRPSEPIVDVAVIVRSQGEEVPHGFT
CIERTTTGNPVELNAGLLNNPQMYICYKRGREKPPIVELGVHCDGKERPRPGFKIVDTTP
YSHSANLASGSPGHQRVFLTYRRAGEGQGYSTLGVTDICLIMPSKGESTPHTFSRVDRNL
NAGMWGPALFLCYKKALAKGNTLVYEAGLLSRYPEQDSEAFPLPESVSVFCLPMGATIES
WPVDTKYQLPVFSTFVLTGASGDKVYGAAIQFYESFPRERLSERQCVWLNLVTVVDRRPI
TSKSVQTRKSICVLSHWPFFDVFHKFLTFLYRYSISGPHVLPLEAHISHFMHNVPFPSPQ
RPRILVQMSSYDNVLLCQPVSSPLPLSGASFMTLLQTLGPENAVALLVAILTEQKLLIHS
LQPDVLTSVGEALVSMIFPLHWQCPYIPLCPLTLADVLCAPVPFIVGVHSSYFDLCDPPH
DVICVDLDTNTIFQSEERKLLSPRSLPRKPYKVLLASLNSQYKQLDEMYNRPVEEASLEF
LLTDYDIIYGRRKQLEMDIQGAFLRFMACLLKGYRSYLQPIAPAPSEKLRDCSNLFYLQG
FLKSRDRAYHKFYSQLLRTQLFTQFIEECSFVSDRHMCLEFFDSCVEKVQVDLEKPEEGP
LMELDDTHGSEHTVFIMPPEEPTGPDGAELPPCYRYDGFPRLQARLFERPQDQLMPSLSQ
ARSSAPSSPAPRRTKQEMKVAQRVAQKYSAVPDMWSKCLLGHCYGLWFITLPTFVREAPS
KVRALQTAYDALRQMEAKKVVLPDEVCYRILMQLCGQYGEPILSVQVLLEMKRAGIVPNT
ITYGYYNKAILESKWPSSTQGGRLRWAKLRNVVLGAAQFRQPLRQRQAEVQSVSTQSEGR
GPKAPAAHFRSSLRRQTTWSGASLEESLPSTSLVKSGSLSFPPREEASLLEAEVPPVTQA
LGGSSDLLPAVPAWLRDVRDGPASSEDGSLSDVSSFVTDESDRFTLNSVDVPPGLGQPEG
VGPGRAPESRGSRGGTPRRSLTAKLQQFLSPIKRPSVRQAPGVEHSHARPEPPPRRSPLE
THLLLPRERPGSTASESSVSLGSEYDLSDTSLCSFYLGKSSDRLSEPPAVEVLLSTCSRC
QSCRSLVYDEEVMAGWTSDDSNLNTACPFCARLFVPFLSIEIQDFQPPHSTTDSSDGSSI
SSDRPRDSEAPAPGSQGPVLSDRHHCLSLDEAEPEPGRESRAGSLCNGFSESPLPRHPAR
RVESLAFAYLSPLVLRKELETLLENEGADFLSQPELVDNHPIIYWNLVWYFQRLSMPSGL
PQLLLASKHVQPAHQGSTQEGPLVSVRLLWDILKPDPDSFPPLYVLWRSHRDIPTRLQSW
RRHNHPFTLNFLEAVLSTMGMGEMHKAISLFLETVAGLANPAHLQRSVYREILFLKLAAL
GRDHVDIADFDKKYKSAYSKLAGSVGKESLKQRRAQPPTSKAIDCRKSFGANLEC
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagtgggcgccccagctggtggactactttgtcgtggccggcttgtcggac
acctcgaagccgctggaggatgagagccagctgctgcggccgtcccggcccagcgagccc
atcgtggacgtggccgtcatcgtccgctcgcagggcgaggaggtgccccacggcttcacc
tgcatcgagcgcaccactacggggaaccccgtggaactcaacgccgggctgctcaacaac
ccccagatgtacatctgctacaagcgcggccgggagaagccgcccatcgtcgagctgggg
gtgcactgtgacgggaaggagcgccccaggccgggcttcaagatcgtcgacacgaccccc
tacagccactcggccaacctggcctcgggcagccccgggcaccagcgcgtcttcctgacg
taccggcgggcaggcgaggggcagggctacagcacgctgggcgtcaccgacatctgcctt
atcatgcccagcaagggggagagcacgccccacaccttcagccgcgtggaccggaacctc
aatgctggcatgtggggacccgccctctttctctgctacaagaaggcgttagccaaaggg
aacactctggtgtacgaagcaggtctcctgagccgctacccagagcaggacagtgaggcc
ttcccgctgcccgagtcggtctcggtcttctgcttgcccatgggggccaccattgagagc
tggccagtggacaccaagtaccagcttcccgtcttctccacgtttgtgttgaccggcgct
tctggggacaaggtgtatggtgccgccatccagttctacgagtctttcccacgggagcgc
ctctcggaacggcagtgcgtgtggctgaacctggtcaccgtggtcgaccggcgccccatc
accagcaagtcggtgcagacgcgtaagagcatctgcgtcctgtctcactggccgttcttt
gacgtcttccacaagttcctcactttcctgtaccgctacagcatctctgggcctcacgtg
ctgcctctcgaggcgcacatctctcatttcatgcacaatgtccccttcccgtctccacag
cggccccggatcctggtgcagatgtcgtcttatgacaacgtgctcttgtgccagcccgtc
tcgtcgcctctgccactgagcggtgccagtttcatgaccctcctgcagacgctgggcccg
gagaatgcggtcgccctcctagtggccatcctcaccgagcagaagctgctcatccattcg
ctccagccggacgtcttgaccagcgtcggggaagccttggtctccatgatcttcccgctg
cactggcagtgcccgtacatcccgctctgcccgctcaccctggcggatgtgctgtgcgcc
ccggtgcccttcatcgtgggcgtccactccagctacttcgacctctgcgaccctccgcac
gacgtcatctgtgtcgatctggacaccaacaccatcttccagagcgaggaacggaagctg
ctctcgccgcggtccctgccccggaaaccctacaaggtgcttctggcgtccttgaactcg
cagtacaagcagctggacgagatgtacaaccggcccgtcgaggaagcgtctctggagttc
ctgctgacggattatgacatcatctacgggcgacggaagcagctggagatggacatccaa
ggggccttcctgcgcttcatggcttgcctgctgaagggctatcgcagctacctccagccc
atcgccccggctccctctgagaagctccgcgactgcagcaacctcttctacctccagggc
ttcctcaagtcgcgagaccgggcttaccacaagttctacagccagctcctccgcacccag
ctcttcacgcagttcatcgaggagtgctccttcgtcagcgaccggcacatgtgcctggag
ttcttcgactcgtgtgtggagaaggtgcaggtggatctggagaagccggaggagggtccc
ctgatggagctggacgacactcacggcagcgaacacacggtgttcatcatgccccccgag
gagccgaccggccccgatggcgctgagctgccgccgtgctatcggtatgacggcttcccc
aggctgcaggccaggcttttcgagcggccccaggaccagctcatgccctcgctctcccag
gcccggagcagcgcgcccagcagcccagcaccacgcaggaccaagcaggaaatgaaggtg
gcccagcgggtggcccagaagtattcggccgtgccggacatgtggtccaagtgcctcctg
gggcactgctacgggctgtggttcatcacgctgcccaccttcgtccgcgaggcgccctcc
aaggtgcgggccctgcagacggcctacgacgcgctcaggcagatggaggccaagaaggtg
gtgctgccggatgaggtttgctaccggatcctgatgcagctctgcgggcaatacggagag
cccatcctctcggtgcaggtgctgctggagatgaagcgggccggcatcgtgcccaacacc
atcacctacggctactataacaaggccattttggagagcaagtggccctccagcacccag
ggaggccggctgcgctgggccaaactgcgcaacgtcgtcctgggggccgcccagttccgg
cagccgctgcgccagcgccaggcggaggtgcagagcgtcagcacgcagtcagagggccga
gggccgaaggcgcccgccgcccacttccggtcgagtctgaggcggcagacgacgtggtcc
ggggccagcttggaggagagcctgccgtccacgtctctggtgaaaagcggcagcctcagc
ttccctccccgcgaagaggcttccttgctcgaagctgaagtgccccccgtgacccaggcc
ctggggggcagcagcgacctcctcccggccgtgcccgcctggctgcgggacgtgcgggac
gggcccgccagctccgaggacggcagcctctcggacgtcagcagcttcgtgaccgacgag
agcgaccggttcaccctgaacagcgtggacgtcccgccaggcctcgggcagccggagggg
gttggaccgggccgggctccggagagccgcggcagccgaggtggcaccccgcgccggagc
ctgacggccaagctgcagcagttcctctcgcccatcaagcggccctccgtgaggcaggcg
cccggcgtggagcattcacacgcacggccggagcccccgcctcgccgcagccctctggag
actcacctgttgcttccccgcgagcgcccgggctccacggcctctgagagctccgtgtcc
ctgggcagcgagtacgacctctcggacacctccctgtgcagtttctacctcggcaagtcc
agcgaccggctttcggagcctccggccgtcgaggtgcttctttccacctgttctcggtgc
cagtcctgccgctcgctggtctacgacgaagaggtgatggccggctggacctccgacgac
tccaacctcaacaccgcctgccccttctgcgcccgcctcttcgtccctttcctcagcatc
gagatccaggacttccagcctccccacagcaccacggacagctctgacggcagctctatc
tcctccgaccggccgcgagacagtgaagcgcccgccccgggcagccagggccccgtgctc
agcgaccgacaccactgcctgtccctggatgaggccgagccggagcctgggagggaatcc
agggctggttcactgtgcaatggcttctccgagtccccgctccctcggcatcccgcccgt
cgcgtggagagcctggcctttgcctacctgagccccctggtcctgcgcaaggagctggag
acgctgctggagaacgagggggccgacttcctctcgcagcccgagctggtggacaaccac
cccatcatctactggaacctggtctggtacttccagcgcctgagcatgcccagcggcctg
ccccagctcttgctggcttccaagcacgtccagccagcccaccagggctccacccaggag
gggcctcttgtgagcgtccgtttgctctgggacatcctgaagccggaccccgacagcttc
ccccctctctacgttctttggaggtcccacagggacatcccaacccgcctgcagtcctgg
cgccgacacaaccaccccttcacgctgaacttcctggaggccgtgctgagcaccatgggg
atgggcgaaatgcacaaggccatcagcctcttcctggaaacggtggccgggctggccaac
cccgcccacctgcagaggagtgtttaccgtgagatcctcttcctcaaactggcggcactg
ggcagagaccacgttgacatcgctgactttgacaagaaatacaaatccgcctattccaag
ctggcgggcagcgtgggcaaggagtccctgaagcagcggcgggcccagccgcccacctcc
aaggccatagactgccggaagagcttcggggccaacctggagtgctag
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