Hemicordylus capensis (graceful crag lizard): 128337441
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Entry
128337441 CDS
T08891
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04120
Ubiquitin mediated proteolysis
hcg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128337441 (SYVN1)
04120 Ubiquitin mediated proteolysis
128337441 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128337441 (SYVN1)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128337441 (SYVN1)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128337441 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128337441
NCBI-ProteinID:
XP_053134428
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All DBs
Position
14:5385790..5410244
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AA seq
624 aa
AA seq
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MFRTAIMMAASLALTSAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMLLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LLTMVLTIFIKYILHSFDLQSENPWDNKAVFMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPSQSQAPPEQPDAGQPQPPPPH
QTPLIPQPPNFPQGILPPFPPGMFPLWPPMAPFPPVPGGQPPHSADSASAAPSTSGTQTG
TSRPGGESAPASDPTAPPAAPGFPFPPPWMGMPFPPLFGFPPMPVPPSGFAGLTDEELRA
MEGHERQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGTPRSAQPPSAPATSASSQE
TPSPEPDTLEPAAFQSTDSTSSPAAETGPSGQAAPSPAAGAEGYTDPSGPEQGGEPPLPE
EPDTAELRRRRLQKLELPSSSSSH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaacagccatcatgatggctgccagcctggccttgacctctgcggtggtggct
cacgcctattacctgaagcaccagttctacccgacagtggtgtacctgaccaagtcgagt
cccagcatggcggtcctgtacatccaagcgtttgtcctggtgttcctgttaggcaagttc
atgggcaaagtgttctttggacagctccgcgcggccgaaatggagcatctccttgagcgg
tcatggtatgccgtgaccgagacctgccttgccttcacagtcttcagggacgacttcagc
ccccgttttgtggccctcttcactctcctcctcttcctcaagtgcttccactggctggcc
gaggaccgagtggactttatggagaggagtccgaacatttcctggctctttcacttccgc
attgtctctctgatgctgcttttgggcatcctggacttcctctttgtcagccacgcctac
cacagcatcctcacgcggggagcctccgtccagctggtctttgggtttgagtacgccatc
ctcctgaccatggtgctcaccatcttcatcaaatacatcctgcattcctttgacctgcag
agcgagaacccttgggacaacaaggctgtcttcatgctctacacagagctcttcacaggc
ttcatcaaggtcctcctgtacatggccttcatgaccatcatgatcaaggtccacaccttc
ccgcttttcgccatccggcccatgtacctggcgatgaggcagttcaagaaagccgtgaca
gacgccattatgtctcgccgggccattcgcaacatgaacaccctgtaccccgacgccacc
gctgaagagttgcaggccatggacaacgtctgcattatctgccgggaggagatggtgacg
ggagccaaacgcctgccttgcaatcacatattccacaccagctgcctgcgctcgtggttc
cagcgccagcagacctgccccacctgccggatggacgtcctccgcgcctctctcccctcg
cagtcccaggcgccccccgagcagccggatgctgggcagccgcaacccccgccgccgcat
cagaccccgctgatccctcagccgcccaactttccccaaggcatcctgccgccttttcct
ccggggatgttccctctgtggccccccatggccccctttcctccagtcccgggagggcag
ccaccccacagcgcagacagtgcttccgctgctccatctacgtcggggacacagacaggc
acctccaggcccggtggggaatcggctcctgcatcagacccgacggcccctccagcagcg
ccgggtttccctttccctcccccctggatggggatgccgtttccacctctctttgggttc
ccccctatgccggtgccgccctccgggtttgcgggactgacggatgaagagctgcgggcc
atggaaggccacgagcggcagcacctggaagcccggctgcagtgcctgcagaacatccac
acactcctcgacgcagccatgctccagatcaaccagtatctcaccgtcctggcgactatc
gggacgccccggtctgcacagccgcctagcgctccagccacttccgcatcctctcaggag
acccccagccctgaaccagacaccctcgaacccgccgccttccagtccaccgacagcacc
tcttcaccagcagctgagacaggaccatcgggtcaagcagcgccatccccagcagccggt
gccgagggctacacagacccatctggccccgagcagggtggggagccccctttgccagag
gagccggacacggcagagttgcgcaggcgccgccttcaaaaactggaactgccctcctcc
tcctcctcccattga
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