Hemicordylus capensis (graceful crag lizard): 128337846
Help
Entry
128337846 CDS
T08891
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03030
DNA replication
hcg03410
Base excision repair
hcg03420
Nucleotide excision repair
hcg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128337846 (RFC5)
03410 Base excision repair
128337846 (RFC5)
03420 Nucleotide excision repair
128337846 (RFC5)
03430 Mismatch repair
128337846 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcg03032
]
128337846 (RFC5)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128337846 (RFC5)
03400 DNA repair and recombination proteins [BR:
hcg03400
]
128337846 (RFC5)
DNA replication proteins [BR:
hcg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128337846 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
128337846 (RFC5)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128337846 (RFC5)
DNA repair and recombination proteins [BR:
hcg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128337846 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
128337846 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_assoc_2
AAA_11
AAA_24
AAA_16
AAA_14
DEAD
nSTAND_NTPase5
RuvB_N
AAA_lid_RFC1
ResIII
DUF815
AAA_5
ATPase_2
AAA_19
AAA_30
DNAX_ATPase_lid
TniB
AAA_7
PhoH
bpMoxR
nSTAND3
AAA_28
AAA_25
TIP49
Thioredoxin_6
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
128337846
NCBI-ProteinID:
XP_053135262
LinkDB
All DBs
Position
15:complement(16967437..16977246)
Genome browser
AA seq
331 aa
AA seq
DB search
MERAAGRNANLPWVEKYRPQTLGDLISHQDILSTIQKFITEDRLPHLLLYGPPGTGKTST
ILACAKQLYQGKEYGSMVLELNASDDRGIDIVRGPILNFASTRTIFKKGFKLVILDEADA
MTQDAQNALRRVIEKFTENTRFCLICNYLSKVIPALQSRCTRFRFGPLTPELMVPRLQHV
IEQEKVDTSDDGMKALVTLSNGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIAN
ILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFIHRVDFPPSVRIQLLIKMADVE
HRLAAGTSEKIQLGALVAAFQVTRDLIAAEA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgcggccggaaggaacgcgaacctgccgtgggttgaaaaatacagacctcag
accctgggtgatctgatctctcatcaggacattctaagtactattcagaagttcatcact
gaagatcgactgcctcaccttctcctctatggacctccagggactgggaagacctctacc
atcttggcttgtgctaaacagctttaccaaggcaaggagtatggctcaatggttctggag
ctgaatgcttcagatgatcgaggaattgacattgtcagaggacctatcctgaactttgcc
agtacaagaaccatctttaagaaaggctttaagctggttattctcgatgaagcagatgcc
atgacacaggacgcccagaatgctctcaggagagtgatcgagaagttcacagagaacacc
agattttgtctgatctgcaactacctctctaaggtcatcccggccctgcagtctaggtgc
accagattccgctttgggcccctgacccctgagctgatggttccccggctgcagcacgtg
atagagcaggagaaagttgacacaagcgatgatgggatgaaggcgctggtgactctttct
aatggtgacatgcgcagagctctgaacatcctgcagagcactaacatggcctttggaaag
gtgactgaggagacagtctacacttgcaccggacacccgctcaagtctgatattgccaac
atcctggactggatgctaaaccaagatttcaccactgcctatcgcaatatcatggaactg
aaaacgctcaaagggttggctctgcacgacatcctgacagagatccacctgttcatccat
cgagttgactttccaccatcggtacggattcagctgctgatcaagatggcagacgttgag
catcgtctggcagcagggacaagcgagaagattcagctgggggcccttgttgctgctttc
caggtcaccagggacctgattgccgctgaggcttag
DBGET
integrated database retrieval system
