Hemicordylus capensis (graceful crag lizard): 128338175
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Entry
128338175 CDS
T08891
Symbol
PUS1
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcg03016
]
128338175 (PUS1)
Enzymes [BR:
hcg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
128338175 (PUS1)
Transfer RNA biogenesis [BR:
hcg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
128338175 (PUS1)
Prokaryotic type
128338175 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
128338175
NCBI-ProteinID:
XP_053136228
LinkDB
All DBs
Position
15:complement(8712910..8724409)
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AA seq
445 aa
AA seq
DB search
MLLSWLGWRRMTGRAAASSFVRSAAAWRPSQIQGCFAMAEDLRTVASSQAKRLKSSNSRE
VEEKLEEDQDGKREENGHEAKRFKVNKEDMEDGTKKFPKRKIVLLMAYSGKGYHGMQRNV
GNSQFKTIEDDLVSALTRSGCIPENHGEDMKKMSFQRCARTDKGVSAAGQIVSLKVWLIE
DILRKINDHLPSHIRILGLKRVTGGFNSKNKCDARTYSYMLPTFAFAHKDRDPLGETYRL
SRETLELVNRLLACYKGTHNFHNFTSQKGPRDPSAKRYIMEMYCEEPFVRDGMEFAVLKV
KGQSFMMHQIRKMIGLVVAIVKGYASEAIMERSWGEEKVDVPKAPGLGLVLEQVHFEKYN
RRFGNDGLHEALEWVEEAEKIAKFKEQHIYPTIISTEKEEKSMANWLETLSNHDFNSTAC
RTHMDNRDSKNSDPEGSDGCGDDSD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgtcctggctgggctggaggcggatgacggggagagcggctgcgagttccttt
gtgagatcagcagccgcttggcgaccgagccagatccaaggctgttttgctatggctgag
gacctccgaactgtagctagcagccaggccaagaggctgaagagcagcaacagcagagag
gtggaggagaaactggaggaagaccaagatgggaagcgggaggagaatggccacgaggcc
aagcggttcaaggtcaacaaggaggatatggaagatgggacgaaaaagttcccgaagagg
aagattgtgctgctgatggcatattccgggaagggctatcatggcatgcaacgcaacgtg
gggaattcccagttcaagacaattgaggacgacctggtctctgccctcacccggtcagga
tgcatcccagaaaatcacggggaagacatgaagaaaatgtcatttcagaggtgcgccagg
acagacaagggtgtttctgcagccgggcagattgtctctcttaaggtctggctgatcgaa
gatattttacggaagattaacgaccatttgccttctcacatcagaattctagggctcaaa
agggtcaccggagggttcaactccaagaacaaatgcgacgcccggacgtattcgtacatg
ctaccgacctttgcctttgcgcacaaagaccgcgatcctctgggcgagacgtaccgcctg
agcagagagaccctggaactggtcaaccgcctcttggcttgctacaaagggacgcacaac
ttccacaacttcacctcccagaaggggcccagggaccccagtgccaagcgctacatcatg
gagatgtactgcgaagagcccttcgtgcgggacggcatggagtttgccgtgctcaaggtg
aaaggccagagcttcatgatgcaccagatccggaagatgatcgggctggtcgtggccatc
gtgaagggctacgcctccgaggccatcatggagcggagctggggggaggagaaggtggat
gtccccaaggcgcccggtctgggcctggttttggagcaagttcattttgaaaagtataat
agacgcttcgggaacgacgggctccacgaggctctggagtgggtggaggaggcagagaag
attgccaagttcaaagagcagcatatctaccccacaatcataagcacggagaaagaggag
aagtcaatggcgaactggctggaaacgctctccaaccatgatttcaactccaccgcctgt
cggacacatatggacaacagagattcaaaaaacagcgatcccgaaggcagtgatggatgc
ggagacgattcggactga
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