Hemicordylus capensis (graceful crag lizard): 128338251
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Entry
128338251 CDS
T08891
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128338251 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128338251 (THOC5)
03041 Spliceosome [BR:
hcg03041
]
128338251 (THOC5)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
128338251 (THOC5)
Spliceosome [BR:
hcg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128338251 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF4175
Motif
Other DBs
NCBI-GeneID:
128338251
NCBI-ProteinID:
XP_053136446
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All DBs
Position
15:2260783..2286428
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AA seq
682 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGGPQESKRGRPDADQDARYYSEEAEMDQRDPSKDYELYKQTCQ
DLQTLMAEIQELKSKGSKDGAAEIEERRIQSCMHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEVELVSIEEFYNEAPPEISKPEMTL
GDPHQQTLSRLDWELEQRKRLAEKYKESLASKEKILKEIEVKKEYLSNLQPRLNSIMQAS
LPVQEYLSMPFDQVHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGNVEEAKAL
CKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTVDLKCKDSSML
LTFYYLMNLNVMTVKVKVTAPAEMTTSISAGDLLSPESLLSCLYPGDHGKRTPNPANQFQ
FDKVGILTLSDYVTELGHPYVWVQKWGGLHFPKDQPQHPVVADSSLSAGHMEKTMKWLRL
RLESRLALHKQFASLEHGILPVTSECQHLFPAKIVSRLVKWVALTYEDYLELSYTKDVVE
AGLAEDTHLYYMALIERGTAKLQAAVVLNPGYPTMPPTFSLCLNWKGEKTSSTDDNIWAM
ESEVNVYYKELFGPKPGHQLLTNQLQRLCVVLDVYLETETHDNSVEGPKEFPQEKMCLRL
VRGPSRMKPFKFNYPQGFFSHR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgactcaagcaagaaacggaagcccaaggttatccgcacggatggaggcccg
caggagagcaagagaggcaggccagatgctgaccaggacgccagatactacagcgaggag
gcagagatggaccagcgagaccccagcaaagattatgagctttacaagcagacctgccag
gatctccagacacttatggcagagatccaggagctgaagagcaaaggcagcaaggacggc
gctgccgagatagaagagcgccggatccagagctgtatgcacttcatgaccctgaagaaa
ctcaaccgcttggctcacattcggctgaagaaggggagggaccagacccatgaggccaag
cagaaggtggacgcttatcacttgcagctccagaatctgctctatgaagtcatgcatctg
cagaaggagatcacgaaatgcctggagttcaaatccaagcacgaggaagtggagctggtg
agcatcgaggagttctacaatgaggcccctccagaaatcagcaagccggagatgacgctt
ggcgaccctcaccagcagacgctctcccgtctcgactgggagctggagcagcgcaaacgg
ctggcggaaaagtacaaagagagcctggccagcaaagagaaaatcctgaaagagatagaa
gtgaagaaggaatatctgagcaacctccagccccgactcaacagcatcatgcaggcttcc
ctcccagtccaggagtacctctcgatgcctttcgaccaggttcacaagcagtacgagaca
gcgaggcacctgccaccccctctctacgtcctcttcgtccaagcgagcgcctacggccag
gcctgcgataagaagctggtcgtggccatagaagggaacgtggaggaagccaaagcgctc
tgcaaacctccggaggactctcaagatgatgagagtgattcggacgccgaggaggagcag
accacgaaacgccggcgcccaacactgggggtgcagctggacgacaagcgcaaggagatg
ctgaagaggcacccgctgtcggtcaccgtggacttgaaatgcaaagatagcagcatgctc
ctgaccttctactacttgatgaacctcaacgtcatgactgtgaaagtgaaggtgacggcg
cctgcggagatgaccacgtcgatcagtgccggagacctgctgtcccccgagtccctcctc
agctgcttgtatcctggcgaccatgggaagaggactccaaaccccgccaaccagttccag
ttcgacaaagttggcatcctgaccctgagcgactatgtgacggagcttggccacccttat
gtgtgggtgcagaagtggggcgggctgcacttccccaaggatcagccacagcatcccgtg
gtggctgacagctccctcagcgccggccacatggagaagacgatgaaatggctccgcttg
cgcttggaatcccgtctggctctgcacaagcagtttgcctccctcgagcatgggattctc
ccagtcaccagcgagtgccagcacctctttccggcaaagatcgtgtcccgtttggtgaag
tgggtggccctcacctacgaggactacctggagctgtcctacacgaaagacgtcgtggaa
gccggcctggctgaggacacgcacctgtattacatggccctgattgaaagagggacagcc
aagctgcaggccgcggtggtgctgaacccgggctatcccaccatgccccccaccttcagc
ctgtgcctgaactggaaaggggagaagaccagcagcaccgacgacaacatctgggccatg
gagagcgaggtcaacgtctactacaaggagctcttcgggccgaagcccggccaccagctc
ctgaccaaccagctgcagcgcctgtgcgtcgtcctggacgtctacctggagacagagacc
cacgacaacagcgtggaaggccccaaggagttcccccaggagaagatgtgtctgcgcctg
gtcagagggcctagtcggatgaagccgttcaaattcaactatcctcagggcttcttcagc
caccgttga
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integrated database retrieval system
