Hemicordylus capensis (graceful crag lizard): 128338439
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Entry
128338439 CDS
T08891
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013
Nucleocytoplasmic transport
hcg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128338439
03015 mRNA surveillance pathway
128338439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128338439
Enzymes [BR:
hcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128338439
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128338439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128338439
NCBI-ProteinID:
XP_053136851
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All DBs
Position
16:4223020..4266254
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLGNLHLKEEKPKPDANGAVVKTDDNAEKTEEEDKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPENKYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKIPEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKDCQMLLFSATFEDSVWNFAKKVVPDPNIIKLKRE
EETLDTIKQYYVLCNSREEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSKEGHQV
ALLSGEMMVEQRAAVIERFRGGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKIHKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgactcctgggcgctggcggtggacgagcaggaggcggctgccgagtcgttg
ggcaacttacatctcaaagaggagaaacccaagccagacgccaatggggctgttgtcaag
acggatgataatgcggagaagactgaagaggaggataaagaggaccgagcggcccagtcg
ctgttgaacaagctgatccgcagcaacctggtggacaacacaaaccaagtggaggtgctg
cagagggaccccacgtctcccctctactcggtcaagtcttttgaagaactgcggctgaag
ccgcagctcctgcagggcgtctacgcgatgggcttcaataggccctccaagatccaggag
aacgccttgccgatgatgctggcagagcccccacagaacctcattgcccagtctcagtct
ggtaccgggaagacggcggcgtttgtcttggccatgttgagccgcgtggaacccgagaac
aaatacccgcagtgcctctgcctctccccgacgtacgagctggcgcttcagacggggaag
gtgattgaacagatgggcaagttctacccagagctgaagctggcctacgcggtccgcggc
aacaaactggagcgtggtcagaagatccccgagcagatcgtcattggcaccccaggcacc
gtcctggactggtgctccaagctgaagttcatcgatcccaagaagatcaaagtctttgtc
ttggatgaggctgatgtcatgattgccacccaaggccaccaggaccagagcatccgcatc
caaaggatgctccccaaggactgccagatgctgctcttctcggccacctttgaggactca
gtgtggaacttcgccaagaaagtcgtccccgaccccaacatcatcaagctgaagcgcgag
gaggagacgctggacaccatcaagcagtactacgtcttgtgcaacagccgggaggagaag
ttccaggccctctgcaacatctacggcgccatcaccattgcccaggccatgatcttctgc
catactcgcaaaacggcaggctggctggcaggcgagctctcaaaagaaggccaccaagtg
gcgctcttgagcggcgagatgatggtggagcagcgggccgcggtgatcgagcgtttccga
gggggcaaggagaaggtcttggtgaccaccaatgtctgcgcccgagggatcgatgtggag
caggtctctgtcgtcatcaactttgacctcccggtggataaagacggcaatccggacaac
gagacgtatcttcaccgcatcggccgcacggggcgctttggcaagcggggcctggccatc
aacatggtggacagcaagcacagcatgaacatcctcaacaggatccaggagcatttcaac
aagaaaattcacaaactggatacagacgatttggacgaaatagagaaaatagctaactga
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