Hemicordylus capensis (graceful crag lizard): 128338585
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Entry
128338585 CDS
T08891
Symbol
CROCC
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcg03037
]
128338585 (CROCC)
Cilium and associated proteins [BR:
hcg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128338585 (CROCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
ATG16
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
128338585
NCBI-ProteinID:
XP_053137239
LinkDB
All DBs
Position
16:complement(16662999..16700121)
Genome browser
AA seq
2076 aa
AA seq
DB search
MSSPEAAAEQEEGAEQKLEAVVQKLERSVLISAEGKSLSLRGCCCGDSPPTRLPARIREI
VTKNLSESDREASFHAEMSSLLSLQEENRILQQELSRVEDLLAQSRAERDELAIKYNAIS
ERLEQALRLETGERERESLENKSLAQQNIELRRRLDEEQAAYKRKLQAYQEGQQRQAQLV
QKLQAKVLQYKKKCSEQEQLLLEKSAELEQQSLVSRLDLTESRLRHDEEHSNDLETALIR
LEEEQQRSSSLAQVNAMLREQLDQANTANQALSEDIRKLTTDWTKAREELEQREAEWRRE
EESFNTYFSNEHSRLLTLWRQVVGFRRHFSEMKTMTERDLSELNHEVSRSTRTVHAACLN
LSGNLRLAESSASVALEKQALLTAQLEEQLKDKVRDMIQLQVRCDTEKAELISRINEVSS
TLERLKSQNAEKSKTIETLTQKLESLEGARAQEQAAAEAEEIETLRTESEMLQQTLRDLA
QAVISDADSGIHLSATDRATDASDSDATGFSLRGLSSSLRTSSPLRRSSPHRSSSPRRSL
SPVFSDSTFAVVQSALQKRQLQLQDIRAKHEASQDLVSSLKRQLAESGNERHSLEQKIQQ
LKDDVDSLTQAQEDAARDASRFRASVELLSSEKTHLEKSLQVAQEKLEALRQENGKLQLA
NCDLHRQRDSLEEEKEDISKDQERAQKEIERRHKQLEQLEQKKSSLKKEHVLMKEALSKA
VLEKEVSENEKAEVAEALTKAELSRAELELALNRLKAEEAALRDSLSKMSALNEGLAQDK
TELNRIIIQLEEEKASLLRKKQEVEQEKATIRDELVRLEQEKLDLEAERQGLGQSLQASE
QSREILEREVLALQKDRGQIQEQLGQLSRQRHAAGEELAQALRDLERHGEASLRAGKEKE
ALMKEKASLVVQLAASERENRGVAEEMAGLRSEKDALETTLFDIQQHLAQLEARKEQLES
ESQNLLRVRESLQVELAGTHKQMEAEVSRLEREQELLAQQLSQTEQDGQAALKKAQAAHE
EDVDRLQREKETLRLELDAEHEEVLQRLSQEREELLARCEAEKEELSEEVTALQQERDES
LLLAENEKQQALSLKESEKTVLLEKLSGTQQSLSSVTLEMERQKRDAQTRQEQERSTINA
LNSELRNLRAQFEEAIAGHEREAKALHEQARDLTQQRESALREVEELKTQLRMLENARDL
IRQDLLEAHRRLREAQEAHDLQHKETADLRRSLSDEAKEKEALQRSNAELRATVKRTESE
RISLKRANEEKEQKISILEEARAAAGKEAVDLRINLQEVERSRLEARRELQELRRQVKML
DSENLKKSKEAAELQARVALDEQREEESRRESFGLKQKIVESEASREAARKELHNLHRKL
SDLESGFLLKEKDWLGSLEEARANEKKLLDNAHNLQLKLEAAQAEAGELGLRLSAAEGRI
QGLEAELGRVEGLKREVEFKLGGLHSALRRTMGIGHGGQAPSPATRGRGSSPKRLFSPPK
GEAATDGRSSPTPRVGSPSSRPLSPERSLSPSRGEQLVADIDPEVVRAALRDFLQELRET
QRERDEARSQLGTLNRQLAEMEAERDVASARVQQLQKQVAERDEGRRSLDGKLSGAQTAL
MLQEETLRRIERERKALADKLATLERSLQAAENERRATQDKISKVKANESKLESDKRRLK
DVLDASESRSTKLELLRRSLEGELQRARLVLGDREAEIQGLHDRIDALQRQVTESETKAS
GLQLSLDRLTLSLAKATEAEASLKEKVQGLSGSLSDSTASSTAAQEKALQLQKALTASEH
DRRVLQVRGRAGRKPPGCLSPARVRPPERLDAARQAVSEAKKQNGVLTERLQALKSQQAE
GELQKDELEAIVRQQEEMLRQRQEGETVALRSLQKLQEDKRLLQERLGSLQRALAQLESE
KREAERSSLRLEKDRNALKKTLDKVEREKLKTHEDSVRLSAEKGRLDRSLTGVEQELTDA
QQQIRLLEAQVAEMEQAQAQNLADSSAHHRQDLQLEVERLRSSQLQVERTLDARERAHRQ
RVKGLEGQILTLKEQLQQELRKGQTLFTSSSILSGN
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccagaggccgccgcggagcaggaggagggcgccgagcagaagctggaggcg
gtggtgcagaaactggagcgcagcgtcctgatctcggcggaagggaagagcctttctctc
aggggctgctgctgcggggactcgccacccacccgcttgccggcccgaatccgagagatc
gtcaccaagaacctgtcggagagcgatagagaagcctccttccacgccgagatgtcctcc
ctgctgtccctgcaggaggagaaccgcatcctgcaacaggagctctcccgggtggaggat
ctgctggcccagagccgggccgagcgcgatgaactggccatcaagtacaacgccatcagc
gaaaggctggagcaggccctgcgcctggagacgggcgagcgggagagggagtccctggag
aacaagagcctcgcccagcagaacatcgagctgcgccggcgcctggacgaggagcaagcg
gcctacaagcgcaagctccaggcctaccaggaggggcagcagcggcaggcccagctggtg
cagaagttgcaggccaaggtcctccagtataaaaagaaatgtagtgagcaggagcagctg
ctgttggagaaatcggcagagttggagcagcagagcctggtgagccgcctggacctcacg
gagtcgcgcctgcgtcacgacgaggagcacagcaacgacctggagacggcactcatccgg
ctggaggaggagcagcagaggagctccagccttgcccaggtcaacgccatgctgagggag
cagctggaccaagccaacaccgccaaccaggccttaagtgaagacatccggaaactgacg
acagactggacgaaagcccgggaggagctggagcagcgggaagcggagtggcggcgcgag
gaagagtcgttcaacacctatttcagcaacgagcacagccgcctgctcaccctctggcgg
caggtggtgggctttaggagacacttcagcgaaatgaagaccatgaccgagagggacctc
tccgagctcaaccacgaagtgtcccggtcgacccggacggtgcacgccgcctgcttgaac
ctgagcgggaacctgcgcctggcggagagcagtgccagcgtggccctggagaagcaggcg
ttgctgacggcgcagctggaggagcagctgaaggacaaggtccgggacatgatccagctg
caagtccggtgcgacaccgagaaggcggagctgatcagcaggatcaacgaggtctcgtcc
acgctggagcgcctgaaatcccagaatgcagagaaatccaagacaattgagacgctgacc
cagaagttagagagtctggaaggagctcgtgctcaggaacaggcggccgccgaggccgag
gagatcgagaccctgcggacggagtccgaaatgctgcagcagactttgcgggaccttgcg
caggccgtcatctccgacgcggacagcggcatccacctctcggctaccgaccgggcgact
gacgcctcggacagcgacgccaccggcttcagcttgcggggcttgtcctccagcctccgg
acgtcctccccgctccgccgttcctccccgcaccggagttcctctcctcgccgcagcctc
tccccggtcttctcggactccacgtttgcggtggtgcagtcggccttgcagaagcgccaa
ctgcagcttcaggacatccgtgcgaaacatgaagcctcgcaggacctggtgtcttccttg
aagaggcagctggcggaaagcgggaacgaacggcattccctcgagcagaagatccagcag
ctgaaggacgacgtcgacagcttgacacaggcccaggaggacgccgcccgtgatgccagc
cggttccgggcatccgtggagcttctgagcagtgagaagactcacctggaaaagagcttg
caagtcgcgcaggagaagttggaagccctgaggcaagagaacgggaagttgcagctggcc
aactgtgacctccaccgccagcgtgacagtctggaggaggagaaagaagacatcagcaag
gaccaggagcgggcccagaaggaaattgagcggcggcacaaacagctggaacagctggaa
cagaagaagtcctccctgaagaaggagcacgtgctgatgaaggaggccctgagcaaggcc
gtcctggagaaggaggtctctgagaacgagaaggccgaggtcgccgaagcccttactaag
gctgagctgagccgggcagagctggagttagccctgaacaggctgaaggccgaggaggcc
gccttgcgcgactccctctccaagatgagcgccctcaacgaggggctggcgcaggataaa
accgagctcaaccgaatcatcatccagctggaagaggagaaggcctccctcctgaggaag
aagcaggaagtggagcaggagaaggccacgatccgggacgagctggtgcggctggagcaa
gagaagctggacctggaggcggagcggcagggtctggggcaatctctgcaggcgtcagag
cagagccgggagattctggagcgggaggtgctggcgctgcagaaggacaggggccagatc
caggagcagctggggcagttgtcccgccagaggcacgcagccggtgaggagctggcgcag
gcgctcagggatctggagcgccacggcgaggcctcgctccgggctggcaaggagaaggag
gcgctgatgaaggagaaggccagcttggtggtgcagctggccgcctcggagcgcgagaat
cggggggtggcggaggagatggcgggcctcaggtccgaaaaggacgccctggagacgacc
ctctttgacatccagcaacatctggctcagctggaagcccggaaggagcagctggagtcg
gagagccagaacttgctccgggtcagggaaagcttgcaagtggagcttgcaggcacccac
aagcagatggaggccgaggtgagccggctggagagagagcaggagctcttggcccagcag
ctcagccagacggagcaagacgggcaggcggctctgaagaaggcccaggccgctcacgag
gaggacgtggaccgtctccagagggagaaggagaccttgaggctggagctggacgcggag
cacgaggaggtcctgcagcgcctgagccaggagcgggaggagctgctggcccgctgcgag
gcggagaaggaggagctgagcgaagaggtcacggccctccagcaggagcgggacgagagc
ctgctgctggccgagaacgaaaagcagcaggcgctgtccctcaaggaatcggagaagacg
gtcctcctggagaaactgtcgggtacccagcagagcctgagcagcgtcaccctggagatg
gagaggcagaagcgagacgcccagacccgccaagagcaggagcggagcaccatcaacgcc
ttgaactcggagctgcggaacctgcgggctcagttcgaagaggccatcgcgggccacgag
cgggaggcgaaggcccttcacgagcaggcccgggacctgacccagcagcgggagtccgcc
ctccgagaggtggaggagctgaagacgcagctgcgcatgctggagaacgcgcgcgacctg
atccgccaggacctgctggaggcccaccgccggctgcgggaagcccaggaggcccacgac
ctccagcacaaggagacggcggacctgcggaggagcctgagcgatgaggccaaagagaag
gaggccctgcagaggtccaacgcggagctgcgcgccaccgtgaagcggaccgagagcgag
cgcatcagtttgaagcgtgccaatgaggagaaggaacagaagatttccatcctggaggag
gcccgggcggccgcgggcaaggaagccgtggatctgcgcatcaacctccaggaggtggag
cgctctcggctggaggctcgccgagaacttcaggagctgcggcgacaggtcaagatgctg
gacagcgagaacctcaagaagagcaaggaggcggccgaactgcaggccagggtcgctctg
gacgagcagcgggaggaggagagccggcgggagtccttcggcctcaagcagaagatcgtg
gagagcgaagccagcagggaggcggccaggaaggagctgcacaatttgcaccggaagctg
tcggacctggagagcggattcctcctgaaggagaaggactggctgggcagcctggaggag
gcccgcgccaacgagaagaagctcctggacaacgcccacaacctgcagctcaagctggag
gccgcccaggccgaggcgggcgagctgggtctgcggctgagcgcagccgaggggcgcatc
cagggcttggaggccgagctgggccgcgtggagggcctgaagcgcgaggtggagttcaag
ctgggtggcctccattccgccctccggcgcaccatgggcattggacacggcggccaggcg
cccagcccggcgaccaggggccgcgggagctcccccaaaaggctcttctcccctcccaaa
ggcgaggctgccacggatggccgcagcagccccacgccacgggtgggcagcccgagctcc
cgccccctgtcgccggaacgcagcctctctcccagccgcggcgagcagctggtggcggac
atcgacccggaggtggtccgggcggcgcttcgggacttcctgcaagaactgagggagacg
cagcgagagcgggacgaagcccgttctcagctgggcaccttgaaccgccagctggcggaa
atggaggcggagagggatgttgccagcgcccgggttcagcagctgcagaagcaagtggct
gagcgtgatgaagggaggcgcagcctggacgggaagctgagcggcgcccagacggccctg
atgctgcaagaggagaccctgcgccggatcgagcgggagcggaaggctttggcggacaag
ctggccacgctggagcgcagcctgcaggcggcggagaacgagaggagggccacccaggac
aagatcagcaaagtgaaggccaacgagagcaagctggagtccgacaagcgccgcctgaag
gacgtcctggacgcctcggaaagccgaagcaccaagctggagctcttgaggcgctcgctg
gagggggagctgcaacgggcccggctggtgctgggcgaccgcgaggcggagatccagggg
ctccatgaccgcatcgacgccctgcagagacaggtgacggagagcgagacgaaggccagc
gggctgcagctgtctctggaccgcctgaccctctcgctggcgaaggccaccgaggcggag
gcctccctgaaggagaaggtgcagggcctctccggctccctctcggacagcaccgccagc
tccaccgcggcccaggagaaggcgctgcagctgcagaaggccctgacggccagcgagcac
gaccggagggtgctgcaggtgcgggggagagcaggacgcaagccgccgggctgtctgtct
ccggccagggttcgccccccagagcggctggatgcggcccgccaggcggtctcggaggcc
aagaagcagaacggggtgctgactgagcgcctccaagcgctgaagagccaacaggctgag
ggggagctgcagaaagatgaactggaggccattgtccgacagcaggaagagatgctgcgc
caacgccaggaaggcgagacggtggccctgcggagccttcagaagctgcaagaggacaaa
cgcctcctccaggagcgcctcggcagcctgcagagagcgctggcccagttggagagcgag
aagcgggaggccgagcgctcctccctgcgcctggagaaggacaggaacgccctcaagaag
accctcgacaaggtggagcgcgagaagctgaaaacgcacgaggattcggtgcggctgtcg
gcggagaaggggcgcctggaccgatccctcactggcgtggagcaggagctgacggacgcg
cagcagcagatccggctgcttgaggctcaagtcgccgagatggagcaggcccaggcccag
aatctggcggactcctcagcccaccaccgccaggacctgcagctggaggtggagcgcctg
cgtagctcccagctccaggtggagcgcacgctggacgccagggaacgggcccaccggcag
cgggtcaaaggcctggagggacagatcctcacgctcaaggagcagctgcagcaggaacta
cggaagggccagacgctcttcacctcgtcatccatcctctcaggcaactag
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integrated database retrieval system
