Hemicordylus capensis (graceful crag lizard): 128338831
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Entry
128338831 CDS
T08891
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcg03037
]
128338831 (WHRN)
Cilium and associated proteins [BR:
hcg03037
]
Primary cilia and associated proteins
USH complex and associated proteins
128338831 (WHRN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
PDZ_4
USH1C_N
Motif
Other DBs
NCBI-GeneID:
128338831
NCBI-ProteinID:
XP_053137837
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All DBs
Position
17:complement(5322915..5409757)
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AA seq
1021 aa
AA seq
DB search
MSADLDRMSVDSCASSTASSSPSSAALGGQPGAGGGAAGIRLLSANVRKLHGALNLLLSE
AEREQFIHCLNAYHCRRNVFDLVQTLKVLLDGAEKRQLLPMLRLVIPRSDQLLFDQYTSE
GLYLKADFLPAANGASPGGPPDDAAAAGSPRSLAPAAAAAAPPPPAPPPAARFWPPPLAS
LRSQPGFSTTLEGTAPLGASGLEELRGEVRQVTLKRNKAQEGLGFSIRGGSEHGVGIYVS
LVEPGSLAEKEGLRVGDQILKVNDKPLDKVTHAEAVKALKGSKKLNLSVHSVGRIPGGYV
TNHIYTWVDPQGRSVSPPTGLPQHQSSSLRKDGEKRSHLQLLQEGDEKKVNLVLNEGRSL
GLMIRGGAEYALGIYITGVDKGSEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSR
HLIMTVKDIGRLPHARTTVDETKWIASSQIEETVVNPAGFSGDHAAEVIAKPSFYRGLAG
SQVTLSSLVNQSRVMLEEQARHLLNEPERATMGYYLDEYKENNIPVDALVMALFELLNTH
AKFSLLSEVRGVISPQDLDRFDNLVLKREIEFMKARQPSGTGTGTDSYSIMSYSDTVSSA
GSHFTSTTVSSARERLLWLIDLMENTSSDLEGGGNGCQSSVNALPDISLDDISSFPEDPP
PFKPPPPTSSSQPADPSAPLNKNAAKDTVTRPSSESSQSGLFFVAPRNPTPPPSLSEKDT
SSIASSTATSSTEDSVSSTIYASVSTTHASRRTMDAHLSLVNQHPIGPFPRVQSPTRLKN
LSPEAPPTGFLPNPSAPSPSPPPPPPHPAPPPPSEKGGPEASPTQHFIMVEVHRPNSEPD
VNEVRSLPQARAILPLSSAPASTLSQLSDSGQTLSEDSGVDIGDTEPSTKDRSRPPAPIK
SRSPQEAPRADGLVEAGPKPPGLLEPMSHLIRVTKSAPTLGIAIEGGANTRQPLPRIVTI
QRGGSAHNCGKLKVGHVILEVNGVALRGKEHREAARLIAEAFKTKDKDYVDFLVTEFNIA
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggatctggatcgcatgtccgtggactcgtgcgcttcctccacggcctcttcc
tcgccctcttcggcggcgctcggggggcagcccggggccggcggcggggcggcggggatc
cggctgctgtcggccaacgtgaggaagctgcacggtgcgctcaacctgctgctgagcgaa
gcggagcgcgagcagttcatccactgcctgaacgcctaccactgccggcgcaacgtcttc
gacctggtgcagaccctcaaggtgctcctcgacggcgccgagaagaggcagctgctgccc
atgctgcgcctggtcatcccgcgctccgaccagctgctcttcgaccagtacacctccgag
gggctctacctcaaggcggacttcttgcccgccgccaacggcgccagccccgggggcccc
cccgacgacgcggcggccgcgggctctccaagatctctggcgccggccgccgctgccgcc
gcgcccccgcctcccgctccgccgccggctgcccgtttctggccgccgccgctagcctct
ctcaggtcgcagccgggtttcagcaccaccctcgaggggacagcgccgctgggcgcctcc
ggcttggaggagctgcgcggggaggtcaggcaagtgaccctcaagaggaacaaggcccag
gagggcttaggcttcagcatccgaggcgggtccgagcacggagtcgggatctacgtctcg
ctggtggaaccgggctccctggcggagaaggaaggcctccgggtgggcgaccagatccta
aaagtcaacgacaagcccttggacaaggtgacccacgcagaagctgtcaaggcactgaag
ggctccaagaagctgaacctttccgtccactcagtggggcgtatccctggcggctacgtt
actaaccatatctacacctgggtggatccccagggccggagcgtctctccaccgaccggc
ctgccccagcatcagagcagctccctacgcaaggacggcgagaaaaggagccaccttcag
cttctgcaagaaggggatgaaaaaaaggtgaacttggtgctgaacgaagggcggtctctg
gggctcatgatccgaggaggagccgaatatgctcttggaatttacatcacaggcgtggac
aaaggatcagaagcagaaagtaccggcttgaaggttggggaccagattctggaggtgaat
ggcagaagtttcctcagcatcccgcacgatgaagcggtgaaactcctcaagtcctcccgc
catctcatcatgaccgtcaaagacatcgggaggctgcctcacgctcggaccacggtggac
gagaccaagtggatagcgagctcccagattgaggagaccgttgtcaacccagcagggttc
tctggagatcatgctgcagaagtgatagcaaagccgtctttctacaggggtctggcagga
tcccaggtaaccctgagcagcctggtgaaccaaagccgcgtcatgctggaggagcaagct
cgccatctcctgaatgagcccgagagagccacgatgggctactacctggatgagtacaag
gagaacaacatcccagttgacgctctggttatggctctctttgagctgctcaacacccat
gccaagttctcactcttgtccgaagtgagaggagtgatatctcctcaggacctcgaccgc
ttcgacaacctggtcctgaagagggagatcgaattcatgaaggcccggcagccctcggga
acgggaaccggcacggactcctactcaatcatgtcgtacagcgacaccgtctcttcggct
gggagccatttcacttccaccaccgtcagttcagctcgggagcgactcttgtggctaata
gacctcatggagaatacgtcatcagacttggaagggggcgggaacggatgccaaagcagt
gtcaatgccctgcctgacatctccctggatgacatctcctctttccctgaggaccctcca
cccttcaagcctccacctcccacttcttcttctcaaccagcggacccatccgctcccctg
aacaagaatgcagcaaaagacaccgtgacacggccttcctcggaatcctcccagtcgggc
ctgttctttgtggcaccccggaaccctacgccacctcctagcctctcagagaaggacacg
agcagcatcgcttcctccacggctacttcctccacagaggactccgtctcgagcactatc
tatgcttctgtctccaccactcacgcctcccgaagaaccatggacgctcatttgtcattg
gtcaaccaacatcccattgggcccttcccaagggtccagtcgccaacccggttgaagaat
ctctctcctgaggctccacccacaggcttcctcccaaaccccagtgcaccttcgccttct
cctccccctcccccaccccacccagctcctccccctcccagtgagaagggtggtccagag
gctagtcccacccagcacttcatcatggtggaagttcatcgtcccaacagtgagccagat
gtgaacgaagtgaggtccttgccccaagctagagccattttgccattgtcgtccgcccca
gcctccaccctctcccagctttccgacagtgggcagaccctcagcgaggacagcggcgtg
gacatcggggacacggagcccagcaccaaagacaggagtcggccgccagcccccatcaag
agccgaagcccccaggaagccccgagggctgatgggctggtagaggctggccccaagccg
ccgggcctcctggaacccatgtcccatctgatccgcgtgacaaagagcgctccaaccctg
ggcatcgccatcgaggggggagccaacacaaggcagcctttgccgcgaatcgtcaccatt
cagcgaggaggctctgcccacaactgcgggaagctgaaggtgggtcatgtgatcctggag
gtgaacggcgtggccttgcgagggaaggaacaccgcgaggcggcccgcctcatcgccgag
gcctttaagacaaaggacaaagactacgtcgatttcctagtcaccgagtttaacatcgca
ctttag
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integrated database retrieval system
