Hemicordylus capensis (graceful crag lizard): 128338848
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Entry
128338848 CDS
T08891
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04010
MAPK signaling pathway
hcg04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128338848 (CACNA1B)
04020 Calcium signaling pathway
128338848 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcg04040
]
128338848 (CACNA1B)
Ion channels [BR:
hcg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128338848 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
128338848
NCBI-ProteinID:
XP_053137881
LinkDB
All DBs
Position
17:4713695..5002645
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AA seq
2230 aa
AA seq
DB search
METRHPCQRDWMTRSHTLLEYFALKLASRSSRWGLFFTKVPISGTAGMSWILLWSSQGLQ
VVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGKFHKACFSNETGERVGDFPCGAE
PPARSCLEGTCQEYWEGPNFGITNFDNILFAVLTVFQCITMEGWTDILYNTNDAAGNMWN
WLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWI
FKAEEVMLAEEDKNAEEKSPLDVLKRATIKKSKNDLIHAEEGEDHFTDVCSVGSPFARAS
LKSSKNESSSYFRRKEKMFRFFIRRMVKAQSFYWMVLCVVALNTLCVAIVHYDQPEGLTT
ALYFAEFVFLGLFLTEMTLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSF
GISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFG
GQFHFNDETPTTNFDTFPTAILTVFQILTGEDWNAVMYQGIESQGGVHSGMFSSVYFIVL
TLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVADVSPLSAANI
SIAAFVKQTRATVSRSSSVTSVNSPKQQNASKSKSVWEQRTSQIRMHNFRTSCEALYNEL
DPEDRVRYATNLHIRPDMKTHLDRPLVVETRTEGRNNNGSKLSPGDVQEEGAEPAKAPPA
ESTEGPRKHHRHREKDKAGEQEKSTAPKEENGESGTNHKEERHRAHRSRSKEGEGGGKEG
KSERNKGPEGGRRHHRRGSVEEGAEREHRRHRGHRHSAERQAKEGNGAVNGTKTERRSRH
RGGSRPGNREGDPGSKGEGGDEPHRRHKMRHKALSTYESVDKENGEKEGEPGEKELRNHQ
PREGQCDAEPCGDMSVAPLHTLPSTCLQRVLEQPEDADNQKNVTLMGQPPLDAPAVNIPV
TITAPPVESAVIPMNNVEFEAKTEEKKDMGADDDLTKNGPKPILPYSSMFILSPTNPIRR
LCHYIVNMRYFEMVILMVIALSSIALAAEDPVQAESPRNEALKYLDYIFTGVFTFEMVIK
AASCPPHVSSCLLVLLPPKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGNKGK
DINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQ
LFKGRFFYCTDESKDLEKDCRGQYLDYEKDEVEAQPRQWKKYEFHYDNVLWALLTLFTVS
TGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQ
GDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMVMIA
LNTIVLMMKFYDAPSPYEEMLKCLNIVFTSMFSLECVLKIIAFGALNYFRDAWNIFDFVT
VLGSITDILVTEIADNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCL
LIAMLFFIYAIIGMQVFGNIALNDETAINRHNNFQTFLQALMLLFRSATGEAWHEIMLAC
LSNQACEALSKLSKNECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILG
PHHLDEFIRIWAEYDPAACGRISYTDMYEMLRHMSPPLGLGKKCPARVAYKRLVRMNMPI
SNDDLSVHFTSTLMALIRTALEIKLASGVLQHQCDAELRKEISLVWPNLSPKTLDLLVPP
HKPEAMTVGKVYAALMIFDFYKQNKNTRDPAHPAPGGLRPTGTVSLFQPLKAALEQSQPV
FPNAFLRQKSSASLNNGGALPTPEGGGIKESVSWGTQRTQDVFYETRTPAFVRGRSEEIP
IEQTSKQVVEMREISPTLANGEQKPGLESQGRAASMPRLAAETQVSVGGLTGNGRLTPIP
DTSPMKRSISTLNPQRPHATHLYEHSRPVEHTHHHHHHRCHRRKERKQKSVDKPPNHLAD
GDAPGEAASKAKKQERGRSQERKLHSSSSSEKQRFYSCDRYGSRDHSQPKSSEHSRPTSP
SGGQEPGAQKPGSGSVNGSPLLSTSGTSTPCRGRRQLPQTPLTPRPSITYKTANSSPVHF
SSFQTGLPTFSPGRLSRGLSEHNALLHGDAQGPSQPLMARIGSDPYLGHREDSDSPHHVV
PEDTLTFEEAMATNSGRSSRTSYVSSLTSQSHQIRRVPNGYHYTLGLSAGPGTSTRARSY
YQERDKDDWC
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atggagacaagacacccatgtcagagagactggatgacacggagccatactttattggaa
tattttgctttgaagctggcatcaagatcatcgcgctggggtttgtttttcacaaaggtt
cctatctccggaacggctggaatgtcatggattttgttgtggtcctcacagggtttgcag
gttgtcctcaagtccatcatgaaagcgatggtgcctctcctccagatcggcctcctcctg
ttcttcgccattgtgatgtttgccatcatcggactggagttctacatgggcaagtttcac
aaggcctgcttctccaatgaaacaggcgagcgggtgggggatttcccctgcggagcagag
ccgcctgccaggagctgcctcgaagggacgtgccaagaatactgggaaggccccaacttc
gggatcaccaacttcgacaacatcctctttgccgtcctcacggtcttccagtgcatcacc
atggaggggtggacggacatcctttacaatactaatgatgcagcagggaatatgtggaac
tggctttatttcattcctctgatcatcattggctccttcttcatgctcaatctggtcctg
ggtgtcttgtcaggcgagtttgccaaagaacgagagcgggtcgagaaccgccgggccttc
ctgaaactccggagacagcagcagatcgagagggaactcaacggctacttggagtggatc
tttaaggcagaggaggtgatgctagctgaggaagacaagaacgcggaagagaaatcccct
ctggatgtgctgaaaagggccacaataaagaaaagcaagaacgatctaatccatgcggaa
gagggtgaagaccacttcacagatgtttgctccgtggggtccccctttgcccgggccagc
ctgaagagcagcaagaacgagagctcctcctacttccgccggaaggagaagatgttccgc
ttcttcatccggcgcatggtgaaagcccagagcttctactggatggtcctctgcgtcgtg
gccctcaacaccttgtgcgtcgccatcgtgcactacgaccagccggagggactcaccacc
gcgctctattttgcggagtttgttttcctgggcctctttcttaccgagatgaccctgaag
atgtatggattggggccgaggaattatttccactcctcgttcaactgctttgactttggg
gtgattgtggggagcatctttgaagtcatctgggcggccgtgaagccaggcacctccttc
ggcatcagcgtgttgcgagctcttcggctgctgaggattttcaaagtcaccaagtactgg
aactccctgaggaacctggtcgtctccttgctgaactccatgaagtccattatcagtttg
ctcttcctcctcttcctcttcatcgtcgtcttcgctttgctgggcatgcagctcttcgga
ggacaatttcatttcaacgatgaaacaccaaccaccaacttcgatactttccccactgcc
attctaactgtatttcagatcctgacgggggaagattggaacgcagtgatgtaccagggg
atcgaatcccaagggggtgtccactcagggatgttctcctcggtctacttcattgtcctg
acgctcttcggtaactacaccctcctgaatgtcttcttggccatcgctgtggacaacctc
gccaacgcacaagagctgaccaaggacgaagaggagatggaagaggccacgaaccagaaa
ctcgccctgcagaaggccaaggaggtagcagatgtcagtcccctctcggcagctaacatt
tccatagcagcttttgtaaagcaaactcgagctactgtctctcgcagctcttcagtcacc
agcgtaaattcacccaaacagcagaatgcctccaagtccaagtctgtgtgggagcagcgc
accagccagatccgaatgcacaacttccggaccagctgcgaagcgctgtacaacgagctg
gacccggaggacagagtgcgctacgcgaccaaccttcacatccgcccggacatgaagact
cacttggaccgccccctggtggtggagacgaggaccgaaggccgcaacaacaacggcagt
aagctgagtcccggggacgtgcaggaggaaggggcggagcccgcgaaggcccctccggcc
gagagcaccgaggggccacggaagcaccaccggcaccgagagaaggacaaggccggtgag
caggagaagagcaccgcgcccaaggaagagaatggcgaatctggaacgaaccacaaagag
gaacgccaccgggcgcaccggagccgcagcaaagagggcgagggcggtggcaaggaaggg
aagagtgagcgcaacaagggcccggaaggcggccgaaggcaccaccgccgcgggtcggtg
gaggagggagccgagcgggagcacaggcgccaccgcggccaccggcactcggccgagcgg
caagccaaagaaggcaacggggccgtcaacggcaccaagacggagcgccgctcaaggcac
cggggaggatcccggcccgggaaccgggaaggcgacccgggctccaaaggagagggcggg
gacgagccccacaggcggcacaagatgcggcacaaggccctctcgacctacgagtcggtg
gacaaggagaatggggagaaggagggggagccgggagagaaggagctgaggaaccaccag
ccgagggaaggccagtgtgacgcagagccctgtggggacatgagtgttgctcccctgcac
accctgcccagcacctgcctgcagagagtcctagagcagccggaagacgccgacaaccag
aagaacgtcaccctcatgggccagccgcccctggacgcccctgctgtcaacattccagtc
accatcactgcccccccagtggagtctgctgtcataccaatgaacaacgttgaatttgaa
gctaagacagaagagaagaaagacatgggtgcagacgatgacttgaccaaaaacggaccg
aaaccaatcctgccttacagctcaatgttcatcctgagtcctaccaacccaatccgccgc
ctgtgccattacatcgtgaacatgcgctactttgagatggtcatcctcatggtcattgcg
ctcagcagcatcgccctggctgctgaagacccggtccaggctgagtcgccaaggaatgag
gctctcaagtacctggattatatattcacaggtgtctttacatttgagatggtgataaag
gcagcctcttgccctccgcatgtctcatcatgtcttcttgttttgcttcctccgaagatg
atcgacctgggccttctgcttcatcccggctcctattttcgtgacctctggaacatcctg
gactttattgtggtcagtggggctcttgtggccttcgccttttcagggaacaaagggaag
gatatcaacaccatcaagtccctgcgagttctgagggtccttcggccgctgaagaccatc
aaacgcctgcccaagttaaaggctgtctttgactgcgtggtgaattctctgaagaacgta
ctgaacatcctcattgtttacatgctcttcatgttcatctttgctgtcattgccgtccag
ctcttcaaaggccggttcttttactgcaccgatgagtcaaaggacctggagaaggactgc
aggggccaatatctggattacgagaaggacgaggtggaagcacagcccaggcaatggaag
aaatacgaattccactatgacaacgtcctctgggctctcttgaccctgttcactgtctcc
actggagaggggtggccgacggttctgaagcattccgttgacgcgacgtacgagaatcaa
ggcccgagccccgggtaccgaatggagatgtccatcttctacgtggtctatttcgtggtc
ttccctttcttctttgtgaacatctttgtggctttaattatcatcaccttccaggagcag
ggcgacaaagtcatgtccgaatgcagcctggaaaaaaacgagagagcctgcatagacttc
gccatcagcgccaagcctctgacgcgctacatgccgcagaacaagcagtcgttccagtac
aagatgtggaagtttgtggtctcgccccctttcgagtacttcatcatggtcatgatagca
ctcaacaccattgtgttgatgatgaagttctacgacgcccctagtccatacgaagaaatg
ctgaaatgcctcaacattgtgtttacgtccatgttttctttggaatgtgtgctgaagatc
attgcctttggagccctgaattatttccgtgatgcctggaacatctttgattttgtcacg
gtcttgggaagtattactgatattttagtaacggagattgcggacaatttcatcaacctc
agcttcctccggctcttccgggcagcccggctcatcaagcttcttcgccagggatacacc
atccggatcctgctctggacctttgtccagtctttcaaggccttaccatatgtgtgtctt
ctcattgcaatgcttttcttcatctatgccatcattggcatgcaggtatttggaaacatt
gcgctgaatgacgaaactgccatcaaccgacacaacaactttcaaacgttcttgcaagcc
ttgatgctgctcttccggagtgccaccggagaagcctggcacgagatcatgctggcctgt
ttgagcaaccaagcctgcgaggccctctccaagctcagcaagaacgagtgcggcagtgac
tttgcctacttctacttcgtctccttcatcttcctctgctccttcctgatgttgaacctc
tttgtggctgtaatcatggacaactttgagtacttgacacgcgactcttccatcctagga
ccccaccacctcgatgagttcattcgcatttgggcagaatatgaccctgctgcctgtggg
cgcatcagttacacggacatgtatgagatgttgaggcacatgtccccgccactaggtctg
ggaaagaaatgtcctgcacgtgtggcctataagcgcctggtgcggatgaatatgccgatc
tcaaacgacgacttgagtgtccacttcacctcaacgctgatggccttgatccggactgcc
ttggaaatcaaacttgcatctggagtcttgcagcaccagtgtgatgctgaactgaggaag
gagatctcactggtttggcccaacctgtccccaaagactctggacctcttggtcccccct
cacaaacctgaggcaatgaccgtggggaaggtctacgcagctctcatgatatttgacttc
tacaagcagaataagaacacccgggatccggcccaccctgccccaggaggccttcgcccg
acaggaaccgtctctcttttccaaccgttgaaagcagccctcgagcaaagccagcccgtc
ttccccaacgcttttctccgtcaaaagagctccgcttctctcaacaacgggggtgcctta
ccgacgccggagggaggagggatcaaggagtcggtttcgtggggaactcaacggactcaa
gacgtgttttacgaaaccaggacaccagcatttgtgcgagggcgctcggaggaaattccc
atcgaacagacaagcaaacaggttgtagaaatgcgagagatcagcccaaccctggccaac
ggcgagcagaagcctggcctggagagccagggccgggccgcttccatgccacgcttggcg
gctgaaactcaggtgagcgtgggaggcttaactggcaatggaaggcttacacccatcccg
gacacgagccccatgaagcgctccatctccacgctgaacccgcagcgtccccacgccaca
cacctctacgaacattcccggccagtggagcacacccaccaccatcaccatcaccgctgc
caccggcggaaagagaggaagcagaagtcggttgacaagccacccaaccacctggccgac
ggtgatgctcctggcgaagccgcgtccaaggccaagaagcaggagcggggccggtcccaa
gaacggaagcttcactcctcgtcctcctccgaaaagcagcgcttctactcctgtgatcga
tacgggagccgagaccactcccagcccaagtcgtccgagcacagccggcccacctccccc
agcgggggacaggagcccggggcacagaaaccgggcagtggttcagttaatgggagcccc
ttgctgtcaacctctgggactagcaccccgtgccgcggtcggaggcagctgccgcagacg
ccgctgacccctcgccccagcatcacgtacaagacggccaactcctcgcccgtccacttc
tccagtttccagactggcttgccgaccttctccccgggccgcttgagccggggtttgtct
gagcacaacgccttgctgcatggagatgcccagggcccctctcagcccctgatggcccgg
atcggctcggatccttacctggggcaccgggaagacagtgacagtccgcatcatgttgtg
cccgaggacacgcttacgtttgaggaggccatggccactaattcgggaagatcctctcgg
acatcctacgtctcctctttgacttcccagtcccaccaaattcgccgagtccccaatggg
taccattacaccttgggcctcagcgccgggcccgggaccagcaccagagcacgtagctat
tatcaggaacgggacaaagatgattggtgctaa
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integrated database retrieval system
