Hemicordylus capensis (graceful crag lizard): 128338875
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Entry
128338875 CDS
T08891
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128338875 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcg03041
]
128338875 (PRPF4)
Spliceosome [BR:
hcg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
128338875 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD_LRWD1
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
128338875
NCBI-ProteinID:
XP_053137978
LinkDB
All DBs
Position
17:14266879..14278336
Genome browser
AA seq
521 aa
AA seq
DB search
MASGMRPSPGLKMKASDDSNAPPAKKGPIFYGSLEEKERERLLKGESGMLGKDAVKAAIE
AGHINITSGEVYDLEEHMSERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNTLKTARLWI
ANYSLPRALKRLDEARLLKEVPEATRTSQKQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKLLATACWSGLCKLWSVPDCNLIHTLRGHNTSVGAIVFHPKATISLDKEDVNLASCAT
DGSVKLWSLESDEPVADIEGHTVRVARVAWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQ
EGHSKGVYDIAFHIDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGFH
IATGSGDNTCKVWDLRQRRCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKVWTHPG
WSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggggatgcggccctcgccgggcttaaagatgaaggcttcggacgacagcaat
gcacctcccgccaagaagggtccgattttctacggaagcctggaagagaaggagcgtgag
cgtctcctcaaaggggagtcaggaatgttgggcaaggatgccgtcaaagctgctattgag
gctggccacatcaacatcaccagcggggaagtgtatgacctggaggagcatatgagcgag
cggcaggctgaagtgctggctgagtttgagcgcaggaagcgtgcccggcaaatcaacgtc
tccactgacgactcggaagtcaaggcctgcttacgagctctcggggagcccatcacgctt
ttcggtgaggggcctgctgaaaggagagagaggctccggaacattctctcagtggttggc
acagatgccttgaagaagaccaagaaagatgatgagaagtctaagaaatcaaaagaagag
tatcagcagacgtggtaccatgaaggaccaaataccctcaagacagccagactgtggatt
gctaactactccctccctcgagctttgaagcgactggatgaagcccgtttgctcaaggaa
gtccccgaggccacacggacatcccagaaacaggagctgcacaaatccttgaggtctctg
aataatttctgcagccaaattggggacgaccgcccgatctcatactgccacttcagcccc
aactccaagctcctggctacagcctgttggagcggcctctgcaagctgtggtcggtccca
gactgcaatctcatccacactttgcgagggcacaacaccagcgtcggcgccattgtcttt
caccccaaggcaaccatctctttggacaaggaggacgtgaacctggcttcctgtgccacc
gacggctcggtcaagctctggagtcttgaaagcgacgagcccgtggctgacatcgagggg
cacacagtccgggtggcccgggtggcctggcatccttccggaaggttcctgggcaccacc
tgttacgaccactcgtggcgcttgtgggatctggaggcccaagaggagattctgcaccag
gaagggcacagcaaaggcgtctacgacatcgccttccacatcgacggctcccttgctggc
actggcggcctcgatgcctttggccgtgtgtgggacctgcgcacgggacgctgcatcatg
ttcctcgagggccatctcaaggagatctacggaatcaacttctctccaaacgggttccac
attgccactggcagcggagacaacacctgtaaagtgtgggatcttcgccagaggagatgc
atctacaccatccctgcccaccagaacctggtgacaggggtaaaatttgaacccaaccac
ggcaacttcctgctcaccggtgcctacgacaacacggccaaggtctggacgcaccccggc
tggtccccgctgaaaaccctggcagggcacgagggcaaagtgatgggcctggacatctcc
ctggacgggcagctgatcgccacctgctcctacgacaggaccttcaagctctggatggca
gagtag
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integrated database retrieval system
