Hemicordylus capensis (graceful crag lizard): 128338891
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Entry
128338891 CDS
T08891
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128338891 (RC3H2)
04121 Ubiquitin system [BR:
hcg04121
]
128338891 (RC3H2)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
128338891 (RC3H2)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128338891 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf_CCCH_4
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
128338891
NCBI-ProteinID:
XP_053138021
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All DBs
Position
17:complement(15893416..15923375)
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AA seq
1211 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDESVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHEAPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLSKASVTSAVSTTAGNVISII
GSPEAAGKMAPSSNGVASLESGVPQLIPRCGDTPSLRALENVKKAGKAVASGQNAAGSPT
EPLPENKIGSPPKIPVSQAAATSTGPPLPPPPPPPPPPVGTEMSSVAPKSSPFASRVALY
PPHSDSLPYFQDPRAHLSFEAPHYPQPGYYPPPPPPPPTVPAGVAPCLPRFVRSGTLPEG
PLPPASVPYGDHYGTFPPRDRLSSPYQPPPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQ
MYPRDDIIRSNSLPPLDVVHPSVYQTFLRERYNSLDGYYSVACQLPAEQRTVPWSREPCG
HLKPTYDDPLRRKPEQWAPCHAQKTPLVSSALPAATPSPTPPSPLFSVDFSTEFCESTGK
DLGGGKFEDERLSHYSPWSCGTISSCISAVESEPKDVLANSGAVLMDLDSGDMKRRVHLF
EAQRRAKEEDPIIPFGDGPIISKWGAISRSSRTGYHTTGPIQATASQGSATKPISVSDYI
PYVSTVDSRWSSYGSESSSSAPFIERDRFVVTDVSAPRKHSSTGDLLSLELQQAKSNSLL
LQREANALATQQKWSSLDEGSQLTLNLLSKEMDLRNGETDYTEEGADPQPDRDIELELSA
LDADEPDGQGEPMEEILGLQLGIGDGDDHLFNGSALENGHPLEQPPKESRQQKRPSLGED
LAILEKPKAILPVTACFSQPLVSCTSSSGSSLPATTSAGGVGSLVLKTAHVMVEGKTDFL
RPVANGKMVNS
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcggcgcagtggacggagttcctgtcctgtccaatctgctacaatgag
tttgacgagagcgtgcacaagcccatcagcttaggctgctcccacacggtctgcaagacc
tgcctgaacaagctccaccgcaaggcctgccctttcgaccagacggccatcaacaccgac
atcgatgtgcttcctgtcaactttgcactcctccagttagtgggagcccaggtaccggac
caccagaccgtcaagctcagtaacctcggagagaacaagcactatgaagtggccaagaag
tgcgttgaagacctggcgctttatctgaagccgctaagtggagggaagggtgtggccagt
ttaaaccagagcgccctgagccgccccatgcaaaggaagctggtgacgctggtcaactgc
cagctcgtggaggaggagggccgggtccgagccatgcgagcagcccgctccctcggggag
agaaccgtcaccgagctgatcctgcagcaccagaacccgcagcagctctccgccaacctc
tgggctgccgtccgggcgcgcgggtgccagttcctcgggccagctatgcaggaagaagcc
ttgaagctggtgctgctggccttggaagacggctcagccctctcccggaaggtcctggtg
ctttttgtcgtccagaggctggagcccaggttcccacaggcctccaagacgagcatcggc
cacgtggtgcagctgctgtaccgtgcgtcgtgcttcaaggtcaccaaaagagacgaagat
tcttccctgatgcagctgaaagaggaattccgcagctacgaggccttgcggagggaacac
gacgcccagatcgtccacattgccatggaggccgggctccggatctcgccggagcagtgg
tcttccctcctctacggcgacctcgcccataaatctcacatgcagtccatcatcgacaag
cttcagtccccagaatcctttgcaaaaagtgtgcaggagctgacaatcgtcttgcaacgt
acgggtgaccctgccaatttaaaccggctccggccacacttggagctgctggccaacatt
gaccctaatccagatgcagcatctccaacgtgggagcaactggaaaacgccatggtggct
gtgaagacagtggtccatggcctcgtggatttcattcagaactacagcagaaaaggccac
gaagccccacagccgcagccaaacagcaaatacaaaacgagcatgtgccgtgacctgcgg
cagcaaggcggatgcccgcgcgggacaaactgcacctttgctcactctcaggaagagctg
gagaagtatcggctgaggaacaagaagatcagtgccaccgtgaggaccttcccgctgctg
agcaaagccagcgtcaccagcgctgtctccaccacggcaggcaatgtcatctccatcatt
gggagcccggaagcggctggcaagatggcacccagcagcaacggggtcgccagcctggag
agcggcgtcccccagctgatcccccggtgtggcgacactccctccttaagggccctggag
aatgtgaagaaggccggcaaggcagttgccagcgggcagaatgccgccgggtccccgaca
gagcctctgcctgagaacaaaatcggttcgcctccgaagatccctgtcagccaagcggca
gctacctcaacgggccctcctctcccccctcctccccctccaccgccgcctcctgtgggc
acagagatgagctccgtcgcccccaaatccagcccctttgccagcagggtggccctctac
ccgccacactccgacagcctcccgtactttcaagatcccagggcccacctctccttcgaa
gcgccacattacccacaaccagggtactacccgcctccgccgccgccgccgccaacggtc
cccgccggcgtggctccctgcctccctcgttttgtgaggtccggcacccttccggaaggc
ccgctccctcctgcgtctgtgccatacggcgaccattacggcaccttcccccctcgggac
agactgagctccccttatcagcccccgccgcccccgccgcagccatacgggccggtgccc
cctgtcccatctggcatgtacgcgccggtgtacgacagcaggcgcatctggcggccgcag
atgtacccgagggacgacattatccggagcaactctctgccgcctctggatgttgtccac
ccctccgtctaccagacctttctgcgggaaagatacaactccttggacggctactactcc
gtggcctgccagttgccagctgaacaaaggacggtgccttggtcaagggagccttgcggc
cacttgaagcccacttacgacgacccgctcagaaggaagccggagcagtgggccccgtgc
cacgcacagaaaacgccactggtgtcctctgcccttcctgcagcgactccgtctccaacg
ccgccttcccctctgttcagcgtggacttcagcactgaattctgtgaaagcaccggcaag
gacctgggcggcggcaagttcgaggacgagcgcctctcccactactcgccctggtcctgc
ggcaccatcagctcctgcatcagcgccgtcgagtcggagcccaaagacgtccttgccaac
tccggagcggtgctgatggacctggacagcggggacatgaagaggcgggtgcatctcttc
gaagcccagcggagggcgaaggaggaagaccccatcatccccttcggcgacgggcccatc
atctccaaatggggcgccatctcccggtcgtcccgcacgggctaccacacgaccggcccc
atccaggccactgcttcccaaggaagcgctacgaagcccatcagcgtgtccgattatatc
ccttacgtcagcacagtggattcgaggtggagctcttacgggtcggagtcgtcttcgtcg
gcacctttcatagaacgggaccgcttcgtcgtgactgacgtatctgccccgagaaagcat
tccagcactggagatctcctgagccttgagctgcaacaggccaaaagcaactcactcctg
cttcagagagaggcgaacgcgctggccactcagcagaagtggagctctctagacgagggc
agccagctcaccctgaaccttctgagcaaggagatggacctgaggaacggcgagacggac
tacacggaagagggtgcagacccccagccggaccgagacatcgaactggagctttcggcc
cttgatgctgatgagcccgacgggcaaggagagccgatggaagagattctgggcctgcag
cttgggatcggcgatggagatgatcacctcttcaatgggtcggctctggagaacggccac
cctctggagcagcctccaaaggagtcccggcagcagaagagacccagcttaggtgaagac
cttgctattctggagaagccgaaagcaatcctgccggtgacagcctgcttcagccagccc
ctggtgtcctgcacgagcagcagcggaagctccctgcctgccacaacttctgccggcggc
gtgggcagcctggttctcaaaacggctcacgtgatggtggaggggaaaaccgactttctg
aggccagttgcaaatggcaagatggtcaacagctga
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integrated database retrieval system
