Hemicordylus capensis (graceful crag lizard): 128338947
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Entry
128338947 CDS
T08891
Symbol
NOTCH1
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128338947 (NOTCH1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
128338947
NCBI-ProteinID:
XP_053138191
LinkDB
All DBs
Position
17:complement(455882..537845)
Genome browser
AA seq
2551 aa
AA seq
DB search
MRRCCSRRRRRLLGVPLWVLLLASLPVLTRGFRCSQPFENCLNGGKCETYPNGTGVCLCP
RDYVGSRCELPNPCLSSPCKNAGTCHALVRGGSVEYTCACRLGFTDRLCLTPEENACLSS
PCRNGGSCDLVTLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCVPFEASYVCKCPAG
FHGASCKEDVNECSRTPPVCKNGGTCLNEVGSYQCRCKQAYAGQNCEHLYVPCNPSPCQN
GGTCRQTGDTTYECTCLQGFAGQNCEDNLNDCPGNNCKNGGTCVDGVNTYNCKCPPEWTG
QYCSEDVDECQLMPNACQNGGTCHNSHGGYNCVCVNGWTGEDCSENIDDCASAACFTGAT
CHDRVASFYCECPHGRTGLLCHLDDACISNPCNEGSNCDTNPVTGKAICTCPMGYMGPAC
NQDVDECSLGANPCEHAGKCINTEGSFQCQCQQGYSGPRCEIDVNECSSNPCQNDATCLD
QIGIFHCICMPGYEGTYCEVNTDECASSPCLHNGKCVDKINEFACECPIGFNGHLCQYDN
DECASTPCKNGARCVDGPNSYTCECTEGFSGPHCETDINDCDPDPCHYGTCQDRIATFTC
LCRPGYTGHRCDININECQSQPCRNGGTCQDKNNAYSCLCLKGTTGPNCEINLDDCASNP
CDYGKCIDRINGYECACEPGYTGRMCNVNIDECASNPCHNGGTCHDLINGFTCTCPEGFH
DGTCLSEVNECNSNPCIHGRCNDGLNGYKCDCDSGWSGTNCDINNNECDSNPCTNGGTCK
DMTGGYICTCQEGFSGPNCQTNVNECASNPCLNQGTCIDDVAGYQCNCLPPYAGVTCGEV
LAPCGQGPCRNGGQCRESEDYKSFSCECPAGWQGQTCEIDINECVKNPCRNGASCQNTNG
SYRCLCRPGFAGAVCETDIDDCQPNPCHNGGSCSDGVDAFLCKCLAGFQGPKCEQDINEC
ASNPCKNGANCTDCVNSYTCTCPSGFSGIHCELNTPDCTESSCFNGGTCVDGINTFTCKC
RPGFTGIYCEHDINECDSKPCLNGGTCQDSYGTYKCSCPQGYTGPSCQNLVHWCSSFPCK
NNGKCRQRDNRYDCECPSGWTGSHCDVPNVSCEVAARQQGVDVGHLCRNSGQCRDQNNTH
FCRCQAGYTGSYCEEQVDECSPSPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLS
HPCQNGGTCIDLINTYKCSCPRGTQGVHCEINVDDCRLFDANASAPKCFNNGKCVDRVGG
YSCLCSPGFVGERCEGDVNECLSNPCDPHGTQNCVQRINNYKCECRPGYAGRHCETVVDS
CQNKPCRNGGTCAVASNTQRGFICKCPPGLDGATCENDVRSCGPLRCLNGGTCVSGPKSX
RCLCLEGFTGPACQFPASSPCHAEPCYNRGTCQATPEAPHYRCLCPANFNGLHCHILDFD
FRGGVGQDIAPPAFEEACELPACPQLAGNKFCDAQCNHHACHWDGGDCSLNFNDPWKNCS
QALQCWKYFNDGKCDAQCNNSGCLYDGFDCQKVEGQCNPLYDQYCKDHYSDGHCDQGCNN
AECEWDGLDCANHVPEKLAEGTLVVVVLTPPATLRNNSLHFLRELSRVLHTNVVFKKDAK
GEFMIFPYYGNPEELKKHHVKRSVESWPGLPSALKASLYSRVXAGGRRGELDQMDVCGVK
GEARRVPSVIHLEIDNRQCVQSSSQCFQSTTDVAAFLGALASLGNLDIPYKIEAVKSETT
EASQSTPWYPMYIVVVVVPLVLLIGVGVLASRKRRREHGQLWFPEGFKVTDSSKKKRREP
LGEDSVGLKPLKTASNGTLMDDNQNEWGDEETLDTKKFRVEEQAALCDLDGQTDHRQWTQ
QHLDAADLRISSMAPTPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEE
APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDHTGKTPL
HAAISADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLISCHADVNAVD
DLGKSALHWAAAVNNIEAATVLLKNGANKDMQNNKEETPLFLAAREGSYETAKALLDHFA
NRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPPLHHGPLGAATLSPPLCSPSGYI
GNLKPALQGKKARKPSAKGLSCNGKEAKDLKARRKKAQEGKGCLLDGSGALSPVDSLESP
RGYLSDVASPPLLPSPFQPSLGHLPGMPDAHLGLSHLGLAGKPDLGLGGAGRLQPFDAGP
PRLSHLPVSSPNTVMGSGGPLSFAVSGGPGLTGQCDWLSRLQNGLLQNPYSPMRSGLQPA
GHPPGQALQHGLMAPLHNGLPTTPLSQMMSYQAIPNGRLQAPAQPHLLQAQQLQQIQQQQ
QQNMQPLPQAQQPHSAASSTGTHTVGQSFLGSELGQPDLQQVTGGALAAHAIMPQDTQVL
ATSLPPTLTQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSS
PHSNHSDWSEGVSSPPTSMPSQMGHIPEAFK
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctgctgcagccgccgccgccgccgcctcctcggagtcccgctgtgggtgctg
ctgctggcgtcgctgcccgtcctgacgcgaggcttccgatgcagccagccctttgaaaac
tgcttaaatggagggaagtgtgaaacctaccccaacggaaccggagtgtgcttgtgcccc
agagactacgtgggcagccggtgtgagctccccaacccctgcctcagctccccctgcaag
aacgccggcacctgccacgctctggtccgcggaggcagcgtggagtacacctgcgcctgc
cggctgggcttcacggaccggctgtgcctgacgcccgaggagaacgcctgcctcagcagc
ccctgccgcaatggaggcagctgcgacctcgtcaccctcacggagtacaagtgccgttgc
cctccgggctggtcaggcaagagctgccagcaggcggacccctgcgcctccaacccctgc
gccaacggcggccagtgcgtgcccttcgaggccagctacgtctgcaagtgtccggccggc
ttccacggggccagctgcaaggaggacgtcaacgagtgcagccgcacgccgcccgtctgc
aagaacggcgggacctgcctcaacgaggtcggctcctaccagtgccgctgcaagcaggcc
tacgccggccagaactgcgagcacctctacgtgccctgcaacccctccccgtgccagaac
gggggcacctgccgccagacgggggacaccacctacgagtgcacctgccttcaaggtttt
gctggtcagaactgtgaggacaaccttaacgattgcccagggaacaactgcaaaaatgga
ggcacctgtgtggatggcgtgaacacctacaactgtaaatgcccacctgaatggacaggc
cagtactgcagcgaggacgtggacgagtgccagctgatgcccaacgcctgccagaacggg
ggcacctgccacaactcgcacgggggctacaactgcgtgtgtgtcaatggctggacgggc
gaggactgcagcgagaacattgacgactgcgccagtgcggcctgcttcacgggggccacc
tgccacgaccgcgtggcctccttctactgcgaatgcccccatgggcggacaggcctgctc
tgccatctggacgacgcctgcatcagcaacccctgcaatgagggctccaactgcgacacc
aaccctgtgacgggcaaggccatctgcacttgccccatgggctacatgggccccgcctgc
aaccaggacgtggacgagtgctcgctgggagccaacccttgtgagcacgctggcaagtgc
atcaacacagagggctccttccagtgccagtgccagcagggctactcgggccctcggtgc
gagatcgacgtgaatgagtgctcctcgaacccgtgccagaacgatgccacctgcttggac
cagatcgggatcttccactgtatctgcatgcccggctacgaaggcacttactgcgaagtc
aacacggacgagtgcgccagcagcccctgcctccacaacgggaagtgcgtggacaagatc
aacgagttcgcctgcgagtgccccataggcttcaacggccacctgtgccagtatgacaat
gacgagtgtgccagcaccccctgcaagaacggggccaggtgtgtggacggccccaactcc
tacacctgcgagtgcactgaaggtttttccgggccccactgtgagacggacattaacgac
tgcgacccagacccctgccactacggtacctgccaggaccgcattgccaccttcacgtgc
ctctgccggcctgggtacactggccaccgctgcgacatcaacatcaacgagtgccaaagc
cagccgtgtaggaacggcgggacctgccaggacaagaacaacgcctacagctgcctgtgc
ctcaaggggacgacgggccccaactgcgaaatcaacctggacgactgcgccagcaacccc
tgtgactacggcaagtgcattgacagaatcaacggctacgagtgtgcctgtgagccagga
tacacagggaggatgtgcaacgtcaacattgacgagtgtgccagcaacccttgccacaat
ggcggcacctgccacgacctcatcaacggcttcacctgcacctgcccagaagggttccat
gacggcacctgcctctcggaagtcaacgagtgcaacagcaacccttgcatccacgggaga
tgcaacgacgggctgaacggctacaagtgcgattgtgactcgggatggagcgggaccaac
tgcgacatcaacaacaacgagtgcgactccaatccgtgcacgaacggcgggacctgcaag
gacatgacgggcggctacatctgcacctgccaggagggcttcagcggtcccaactgccag
accaacgtcaacgaatgtgcttccaatccatgcctgaaccaggggacctgcattgacgac
gttgctggctaccagtgcaactgcctgcccccgtatgccggggtcacctgcggagaggtc
ctggctccctgcggacaggggccctgcaggaacggaggccagtgccgggagtcggaggac
tacaagagcttctcctgcgagtgccctgcaggctggcaagggcagacctgtgagatcgac
atcaacgaatgcgtgaagaatccctgccggaacggcgccagctgccagaacacgaacggg
agctaccggtgcctctgcagacccggcttcgcaggcgccgtctgcgagacggacattgat
gactgccagcccaacccctgccacaatggcggctcctgctccgacggcgtcgacgccttt
ctctgcaagtgcctggccggcttccagggccccaagtgcgagcaggacatcaacgagtgc
gccagcaacccctgcaagaacggggccaactgcaccgactgcgtcaacagctacacctgc
acctgcccctccggcttcagcgggatccactgtgagctcaacacgcccgactgcaccgag
agctcctgcttcaacggcgggacctgcgtggacggcatcaacaccttcacctgcaagtgc
cggccgggcttcacgggcatctactgcgagcacgacatcaacgagtgcgactccaagccc
tgcctgaacggcggcacctgccaggacagctacgggacctacaagtgcagctgcccccag
ggctacacagggcccagctgccagaacctggtgcactggtgcagctccttcccctgcaag
aacaacggcaagtgccggcagagggacaaccgctacgactgcgagtgccccagcggctgg
accggctcccactgcgatgtccccaacgtctcctgcgaggtggctgcccggcagcaaggg
gtggacgtcgggcacctgtgcaggaactcgggccagtgcagggaccagaacaacacccac
ttctgccgctgccaggccggctacacgggcagctactgtgaggagcaagtggacgaatgc
tcccccagcccctgccagaacggggccacctgcaccgactacctgggaggctattcctgc
gagtgcgttgccggctatcacggcgtgaactgctcggaggagatcaacgagtgcctctcc
cacccctgccagaacggagggacttgcatcgacctcatcaacacctacaagtgctcttgt
cctcgagggactcaaggggtgcactgcgagatcaacgtggacgactgccgcctctttgac
gccaacgcctcggcgcccaagtgcttcaacaacgggaagtgtgtcgaccgggtggggggc
tacagctgcctctgctccccgggcttcgtgggggagcgctgtgagggggacgtcaacgag
tgcctctccaacccctgcgacccgcacggcacccagaactgcgtccagcgcatcaacaac
tacaagtgcgagtgccggccgggctatgcggggcggcactgcgagacggtggtggacagc
tgtcagaacaagccctgcaggaatggcgggacgtgtgccgtggccagcaacacccagcgc
ggcttcatctgcaagtgccccccgggcttggacggggccacctgcgagaacgacgtgcgc
agctgcgggccgctgcggtgcctgaacggcgggacgtgcgtctccggcccgaagagcncc
cgctgcctgtgcctggagggcttcacgggccccgcctgccagttcccggccagcagcccc
tgccacgcggagccctgctacaaccggggcacctgccaggccaccccggaggcgccccac
taccgctgcctctgcccggccaacttcaacgggctccactgccacatcctggacttcgac
ttccgggggggcgtcgggcaggacatcgccccgccggccttcgaggaggcctgcgagctc
cccgcctgcccccagctggccggcaacaagttctgcgacgcccagtgcaaccaccacgcc
tgccactgggacgggggcgactgctcgctcaacttcaacgacccctggaagaactgctcc
caggccctgcagtgctggaagtacttcaacgacgggaagtgcgacgcccagtgcaacaac
agcggctgcctctacgacggcttcgactgccagaaggtggaaggccagtgcaaccccctc
tacgaccagtactgcaaggaccactactccgacgggcactgcgaccaggggtgcaacaac
gccgagtgtgagtgggacggcctggactgcgccaaccacgtgccggagaagctggccgag
ggcaccctggtggtggtggtgctgaccccgccggccaccctgcggaacaactccctgcac
ttcctgcgggagctcagccgcgtcctgcacaccaacgtggtcttcaagaaggacgccaag
ggcgagttcatgatcttcccctactacgggaacccggaggagctcaagaagcaccacgtc
aagcggtccgtggagagctggccgggcctgcccagcgcgctgaaggcctcgctctactcg
agggtcnnggcgggaggcagaagaggggaactggaccagatggacgtctgcggggtaaag
ggagaggcccgccgggttccgtcggtcatccacctggagattgacaaccgccaatgtgtc
cagtcgtcgtcccagtgcttccagagtaccaccgacgtggcggctttcctgggcgctctg
gcctcgctggggaacctggacatcccctacaagatcgaagccgtcaagagtgaaacgacg
gaggcctcccagagcaccccctggtatcctatgtacatcgtggtggtcgtggtcccgctg
gtgctcttgatcggtgtcggcgtcttggcctcgcgcaagcggcggagggaacatgggcag
ctctggttccccgagggcttcaaagtgacggactccagcaagaagaagcgccgggagccc
ctgggggaggattccgtgggcctgaaacccttgaaaacggcttccaacggtaccctgatg
gatgacaaccagaatgaatggggagacgaagagaccttggacaccaagaagttccgggtg
gaggagcaggccgcactgtgcgacctggacggccagacggaccacaggcagtggacccag
cagcacctggatgcggccgacctgcgcatttcttccatggcccccaccccgcctcaaggt
gaaattgatgccgactgcatggatgtcaacgtgcggggaccagacgggttcactccgctg
atgattgcctcgtgcagcggaggcgggctggagacgggcaacagcgaggaggaggaggag
gccccggcggtcatttccgacttcatctaccagggggccagtctgcacaaccagacggac
cgcacaggggagacggccctccacctggccgcccgctactcccgctcggacgctgccaag
aggctgctggaagccagcgccgatgccaacatccaggaccacacggggaagacgccgctt
cacgctgccatctccgccgacgcgcagggcgtcttccagattctgatcaggaacagggcc
accgacctggacgcacgcatgcacgatgggacgacgcccctgatcctggctgcccgtctg
gccgtggaagggatgctggaggacctcatcagctgccacgcggacgtcaacgcggtggat
gatctcgggaagtctgctctgcactgggccgctgccgtgaataacattgaagcggccacc
gtgctgctgaagaacggggccaacaaggacatgcagaacaacaaggaggagacccccttg
ttcctggcggccagggaagggagctacgagacggccaaggccctgctggaccactttgcc
aaccgggacatcaccgaccacatggaccggctgccccgcgacattgcccaggagcgcatg
caccacgacatcgtgcgcctgctggacgagtacaacctggtgcgcagcccgcccctgcac
cacgggcccctgggggcggccacgctctccccgcccctctgctcgcccagcggctacatc
ggcaacctgaagccggccctgcagggcaagaaggcccggaagcccagcgccaaggggctc
agctgcaacgggaaggaggccaaggacctgaaggcccgccggaagaaggcccaggagggc
aagggctgcctgctggatggctccggggccctctcgcccgtcgactccttggagtcgccc
cgggggtacctctcggacgtggcctcccctcccctgctgccctctccctttcagccgtcc
ctcggccacctgcccggcatgcctgatgcccacctgggcctcagccacctgggcctggcg
ggcaagccggacctgggcctgggcggggccggccggctgcagcccttcgacgcggggccc
ccccgcctctcccacctgcccgtctccagccccaacacggtcatggggtccggggggccg
ctgagcttcgccgtgagtgggggccccggcctgacgggacagtgcgactggctgagcagg
ctgcaaaacgggctgctgcagaacccctacagccccatgcggagcgggctgcagccagcg
gggcacccgcccggccaggccctgcagcacggcctgatggcccccttgcacaacggcctg
cccaccaccccgctctcccagatgatgagctaccaggccatccccaacggccgcctgcag
gcccccgcccagccccacctgctgcaggcccagcagctgcagcagatccagcagcagcag
cagcaaaacatgcagccgctgccgcaagcccagcagccccacagcgccgcctccagcacc
ggcacccacaccgtcggccaaagcttcctggggagcgagctgggccagcccgacctgcag
caagtgaccgggggtgctctggccgcccacgccatcatgcctcaagacacacaggtcctg
gccacctcgctgccgcccaccctcacccagcccatgaccaccacccagttcctgaccccg
ccctcccagcacagctactcctcccctctggacaacacccccagccaccagctgcaggtg
cccgaccaccccttcctgaccccgtcccccgagtcaccggaccagtggtcaagctcctct
ccgcattccaaccactcggattggtcggaaggcgtctccagcccgcccactagcatgccc
tcgcaaatgggccacatcccagaagccttcaagtga
DBGET
integrated database retrieval system
