KEGG   Hemicordylus capensis (graceful crag lizard): 128339089
Entry
128339089         CDS       T08891                                 
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4 isoform X1
  KO
K03679  exosome complex component RRP4
Organism
hcg  Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hcg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    128339089 (EXOSC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcg03019]
    128339089 (EXOSC2)
Messenger RNA biogenesis [BR:hcg03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     128339089 (EXOSC2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     128339089 (EXOSC2)
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N EXOSC1 RRP40_S1
Other DBs
NCBI-GeneID: 128339089
NCBI-ProteinID: XP_053138602
LinkDB
Position
17:11669698..11684139
AA seq 303 aa
MLFQEWLHPRRGISSSAHTSSLPFIGNQGGPCLAKGTSHACYHKTSNPLRRGHGTYLGDE
KLVASVAGVVDRVNKLVCVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLL
SSMNLPGGELRRRSAEDELAMRDYLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGV
LVQVSPSLVKRQKTHFHDLPCGASLILGNNGFIWIYPTPEQKDEEAGGFITDLEQVPLPD
REVISRLRNCVVALVTQKLMLYDTTILYCYEASLPHQIKDLLKPEVMEEIVLETRQRLLE
LEG
NT seq 912 nt   +upstreamnt  +downstreamnt
atgctcttccaagagtggctccatccccggaggggaatctcttccagtgctcacacatca
agtctcccattcataggcaaccagggtggaccttgcttagctaaggggacaagtcatgct
tgctaccacaagaccagcaatcctctccgaaggggccatggtacgtacctgggagatgag
aagcttgtcgcatctgtggctggcgttgtggacagggtgaacaagctggtctgtgtcaaa
gctttgaaaacaaggtataatggcgaagttggtgatattgtggttggtcgaatcacagag
gtgcagcagaaacggtggaaagtggagaccaattctaggctggattccgtcttgcttctt
tcctcaatgaatcttccaggaggggagctgagacgaagatcagcggaagatgagctagca
atgagggactacctccaagaaggggacttgataagcgcagaggtccaagccgtcttctct
gatggggcagtgtcgctgcacacccggagtctgaaatacggaaagctggggcagggagtg
cttgtccaggtttccccctctctcgtgaaacgccagaaaactcacttccacgacttgcct
tgtggcgcctcgcttatcctcggcaacaatggcttcatctggatctacccaacccctgaa
cagaaggatgaagaggccgggggcttcatcactgacctggagcaagtgcccctgcctgac
cgtgaagtgatctctcgcctccgcaactgcgtcgtggctctggtgacacagaaactgatg
ctctacgacaccaccatcttgtactgctatgaagcctcccttcctcaccagatcaaggac
cttctcaagccagaagtgatggaggagattgtgctggagacgcggcagagactgctggaa
ttagagggctga

DBGET integrated database retrieval system