Hemicordylus capensis (graceful crag lizard): 128339262
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Entry
128339262 CDS
T08891
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128339262 (NPAS3)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128339262 (NPAS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
128339262
NCBI-ProteinID:
XP_053138841
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All DBs
Position
1:complement(55638393..56768328)
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AA seq
961 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAGGAAGGVPAGPGMGRASTAANGNPQNVQGITSYQQRITVQHPL
PNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAI
TSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGIQMWKSEVCMRKTPC
EVIGAQRRRSPSALATEVFESHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQV
ELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVES
TSPSLLTTDNNLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQ
IMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCY
HFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSCATIAINAKNANEKNII
WVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDNSEDNENSKSDEKGNQS
ENSEDPESDRKKSGNQSDNEMNCNEDGNSSSNQDSRDSDDSFENSDFENQKAPEDSFGTL
GSMQIKVEHYVESESDLRLQNCESLTSDSAKDSDSAGEVNAQSSSKHQKRKKRRKKQKGG
SMTRRRLSSTSSPNGLDSALVDQPQLLSSPNSASVLKIKTEISEPINFDNDSSIWNYPPN
REISRNESPYSMTKPPNSEHFPSPQASSSLHVSIPDSVLTPPGTENTASRKSQFSTSSNS
ALAPVSSDPLSPPLSASPRDKHPGGPSTSNSLLYTGDLEALQRLQAGNVVLPLVHRVTGT
LAATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLPNTHAVNFVDVNSPSFGLDPKTPMEML
YHHVHRLNMSGPFGSAVSAASLTQMPAGNVFTTAEGLFSTLPFPVYSNGIHAAQTLERKE
D
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgatccggatcttcccggatttcagcgtgcaggtgactgcagctgcggccggcggagcg
gccgggggagtgccggccggtccgggcatggggagagccagtaccgcagccaacggcaac
ccgcaaaacgtccagggcatcacttcctaccaacaacgaataactgtccagcatcctctg
cccaaccaatcagaatgtaggaaaatctacagatatgacggaatctactgtgaatctacc
taccagaatttacaagccttgagaaaggaaaagtctcgggatgctgctcgttctcgccga
ggaaaggaaaattttgagttctacgagctggccaaattgttgccgctccctgcagccatt
accagccagcttgacaaggcatccataattcgactaacaattagctatttgaagatgagg
gactttgctaatcagggggatcctccatggaacttgcgaatggaaggaccaccacccaac
acatcagtaaaagggatacaaatgtggaaatctgaggtctgcatgagaaagacaccatgt
gaagttataggtgcccagcgcaggagaagccccagtgcacttgccactgaagtatttgag
tcacatttgggaagtcacattttacagtccctggatggatttgtatttgcactaaaccaa
gagggaaaatttttatacatttcggaaacagtctctatctatctaggcctatcccaagtg
gaactgacaggcagcagcgtgtttgactacgtccacccaggagaccatgtggagatggca
gagcagctgggcatgaagcttcccccggggcgaggccttctctcgcagggaacagcagag
gatggagccagctcagcatcttcatcttctcagtctgagacccctgagccagtggaatcc
acaagccccagcctacttacaacagacaacaatctagagcgttcttttttcatccggatg
aaatctaccctgactaagcgaggtgtgcacatcaaatcttcaggatataaggtgattcat
ataacaggaaggttacgtctgagagtgtcgctgtcccatgggcggacagttcctagccaa
atcatggggcttgtagttgttgctcatgctttgccccctcctacgatcaatgaagtcaga
atcgactgccacatgtttgttactcgagtaaacatggacctcaatatcatttactgtgaa
aataggattagtgattacatggatctgacgcctgtagatatcgtagggaagagatgttac
cacttcattcatgctgaagatgttgaaggaatcaggcacagtcatttagacttgctgaac
aagggtcagtgtgtaacaaaatattaccgctggatgcagaagaatgggggttatatttgg
atacagtcttgtgccaccatcgctataaatgccaagaatgcaaatgagaagaacatcatc
tgggtcaattaccttctcagcaacccagaatacaaggacactccgatggatattgcacaa
cttcctcatctgccagagaaaacctcagaatcctctgagacttcagattctgaatcagat
tcaaaggacaattcagaggacaatgagaattcaaagtcagatgaaaaaggaaaccagtca
gaaaacagtgaagatcctgagtcagataggaagaagtctgggaatcagtcagataatgaa
atgaactgtaatgaggatggtaacagctccagcaaccaggacagcagagacagtgatgac
agctttgaaaactctgactttgagaatcaaaaggctccagaggatagttttggcacgctt
ggttctatgcagatcaaggtggagcactatgtggagagcgaatcggacttgcggttacag
aactgtgaatcgttgacctcggacagtgccaaggactcagacagtgcaggagaagtcaat
gcccagtcttccagcaaacatcaaaagaggaagaagaggaggaaaaagcagaaaggaggc
agcatgactcgcagaaggctctcaagcacctcaagccccaatggacttgactcagcattg
gttgatcagccccagctgctctcatcaccaaacagtgcctcagtgctcaaaatcaaaaca
gagatctcagaacctatcaattttgataacgatagcagtatttggaattacccacccaac
agggaaatctcaaggaatgaatcgccctacagtatgaccaagcccccaaactcagagcac
ttcccctctccccaagccagcagtagtttacatgtctccattccagactctgttctcacc
ccaccagggactgaaaatactgccagccgcaaatctcagttcagcacctcatccaactcc
gccttggctcccgtatcctctgaccctttgtcaccacctctgtcagcatctccacgggac
aagcatccgggaggccccagcacttccaactctttgttgtacactggtgatctggaagcc
ctgcagaggttgcaggcaggcaatgtggtccttcctttggttcacagggtaactggaacc
cttgctgccaccagcacagctgctcagagggtctataccactggcactattcggtatgct
ccagctgaagttactttagccatgcaaggcaatctcctccccaacacccatgctgttaac
tttgtggacgttaacagcccaagcttcggcctagatcctaaaacaccgatggaaatgctc
taccaccacgttcaccgactcaatatgtcaggaccatttggaagtgctgtgagcgcggcc
agtctgacccaaatgcctgcagggaatgtgttcacaactgccgaaggactgttctctact
cttccatttcctgtgtacagcaatggcatccatgccgcacagacactggaacggaaagag
gattga
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