Hemicordylus capensis (graceful crag lizard): 128339889
Help
Entry
128339889 CDS
T08891
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04137
Mitophagy - animal
hcg04140
Autophagy - animal
hcg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128339889 (HIF1A)
04137 Mitophagy - animal
128339889 (HIF1A)
04148 Efferocytosis
128339889 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128339889 (HIF1A)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128339889 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
128339889
NCBI-ProteinID:
XP_053140397
LinkDB
All DBs
Position
1:13242467..13309238
Genome browser
AA seq
813 aa
AA seq
DB search
MEEPSTTGGPNEKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHHVSAHLDKA
SIMRLTISYLRMRKLLDADDLEAEAEMETQLNCFYLKALDGFVMVLSEDGDVIYLSENVN
KCMGLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTS
RGRTVNIKSATWKVLHCTGHIRVYDSCNNQTACGYKKPPMACLVLICEPIPHPSNIEVPL
DSKTFLSRHSLDMKFSYCDERITELIGYDPEELLGRSVYEYYHALDSDHLTKTHHDMFAK
GQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQGDLIFSLQQT
ECMLKPVDSPEMQMTKVSGKTDVDDKNSLFERLKKEEPDALTFLAPAAGDTIISLDFGND
ESDEQQFEDVPLYNDVMLPSSSEKLQSINLAMSPLPASEATQPLRSSADPALNREVVAKL
EPSPEPLDLAFAARQTQEQPATPSDGSTSQSSPEPNSPSDYCFDVDNEMASEFKLELVEK
LFAIDPDSKYPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSCASSPSTMAPVT
RLQSALPSTTTDKIKSVTAKQGEDSKMLVAPIHIAIETTSAPASPYAETPSRTSSPVRAG
KDTIEQKEKSNPGTPSLLTVTLGKSRSTAANEEISPKMIALHNIQRKRKMEQDGLLFQAV
GIGTLLTQSDSPGANVSLAWKRVKGCKSSGQNEVAKTVILLPSDIASKLLGQSIDEKGLP
QLTSYDCEVNAPIQGNRNLLQGEELLKALDQVN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccagcacgacgggcggccccaacgagaagaaaaggattagctcagaaagg
agaaaagagaagtctagagatgcagccaggtgccggaggagcaaggaatcggaggtgttc
tatgagcttgctcatcagttgcctcttccccaccatgtgagcgcacatctcgacaaagcc
tcaattatgaggctaactatcagctatctgcgcatgagaaagctgcttgatgcagatgac
ctggaagcagaagctgaaatggagacacagctgaattgtttttacttaaaagctcttgat
ggatttgtcatggttctctcagaggatggggatgtgatctacctgtctgaaaatgtgaac
aagtgtatgggactcacacagtttgagttgactggacacagtgtgtttgatttcactcat
ccgtgtgaccacgaagaactgagagaaatgctcacccaccggaatggtcctgtgaaaaag
gggaaggagcagaatacagaacgtagctttttcctcagaatgaagtgtacgttgaccagc
agaggaagaactgtcaatataaaatctgccacatggaaggtgcttcattgcacagggcac
attcgtgtctatgacagttgcaataatcagacagcgtgtgggtataaaaagcctcccatg
gcatgtttggtgttaatctgtgaacctatccctcatccgtcaaatatcgaagtccccctg
gacagcaagacgttcctcagccgccacagtctcgacatgaaattttcatactgtgatgaa
aggattacagaactgatagggtatgaccctgaagagctcttgggtcgctccgtatatgaa
tactatcatgccttagactctgaccatctgaccaaaacacatcatgacatgtttgctaaa
ggtcaagtgacgactgggcagtacagaatgcttgctaagcaagggggctacgtctgggtt
gagactcaagcaacggttatctacaacactaagaattcccagccacaatgcatcgtgtgc
gtgaactatgtcttgagtggcattgtgcagggagacttgattttttcactccagcaaact
gagtgcatgttgaagccagtggattctcctgaaatgcaaatgaccaaagtatcgggcaag
actgacgtggatgataaaaacagcctctttgagagactgaagaaggaggagccagacgca
ttgaccttccttgcccctgcagccggagacaccattatatcattagattttggcaatgat
gagtctgatgagcaacagtttgaggacgttcctttgtataatgatgtaatgctcccctca
tccagtgagaaattgcagagtataaatttggcaatgtccccactacctgcttctgaagcg
acacagccactccgtagcagtgctgacccagcactcaatagagaggtggtggccaagctg
gagcccagcccagagcccttagacctggcttttgctgcccgtcagacccaagagcagcca
gccacaccttcggatggaagcaccagccaaagctcacctgagcctaatagtcccagtgac
tactgctttgatgtggataacgagatggccagcgagttcaagttggaactggtggagaag
ctctttgcaatagacccagactcgaaatacccgttctctacgcaggaaactgatttagat
ttggaaatgttggcaccctacatccctatggacgacgacttccagttacgctcgtttgat
cagctttctccacttgagagcagctgtgcaagttctccttccaccatggcccctgttacc
agattgcagtcggctctgccatcaactaccacggacaagataaagtctgtgaccgccaaa
caaggggaggactcaaagatgctcgtagctcccattcatatcgctatagaaaccactagc
gcccctgcatcgccctatgcagagactccaagtcggacatcctccccagttcgagcagga
aaagacacaatagagcagaaagagaaatcaaatccaggaacgccaagcttattaacagtc
acgttgggcaaaagtaggtcaactgcagcgaatgaagaaatcagtccaaagatgatagct
ttgcataatattcagaggaaacgaaagatggagcaggatggcctgcttttccaagcagtg
ggaatcggcacattactgacgcagtcagacagtcctggagcaaatgtgtcactggcttgg
aaacgtgtaaaaggatgcaaatccagtggacagaatgaggtggcaaagacagtcatttta
ttaccatcagatatagcaagtaaacttctagggcagtcaatagacgagaaggggctcccg
cagcttaccagctatgactgtgaagtgaatgctcccatacaaggcaaccgaaaccttcta
caaggcgaagagttgctcaaagccctggatcaagtcaactga
DBGET
integrated database retrieval system
