Hemicordylus capensis (graceful crag lizard): 128339973
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Entry
128339973 CDS
T08891
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128339973 (PRDM1)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128339973 (PRDM1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
STL11_N
B129_C2H2-zf
zf-C2H2_FBX41
Motif
Other DBs
NCBI-GeneID:
128339973
NCBI-ProteinID:
XP_053140542
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Position
1:329372891..329498533
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AA seq
807 aa
AA seq
DB search
MHELKIGNLFHGYTKDTTLCNSYIVNRGALGKGTKSIMKMDMKDADMTLWAETEFEDKCT
YIVNDHPADPSTEGCTITQAESSLPRNLIFKYAGNGKEVIGVISKEYIPKGTRFGPLVGE
IYTNDTVPKDANRKYFWRIYSGDEFLHFIDGFNEEKSNWMRYVNPAHSVQEQNLAACQNG
MNIYFYTIKPIPANQELLVWYCRDFADRLHYPSTGDLGMMNITKSHVNPKITNDKDELHQ
KNVPKREHSVKEILKTDSTHPKGKDLFHTHLLQPAQEKDLEGLRKNCSPERPFYPRIVYP
IRPHIPEDYLKTSLSCGIERPSYIAHSPIQSSTTPSPSARSSPDQSLKSSSPHSSPGVTV
SPLTPMSQEYREPYSYFNGLYSSEGLGSYSGYAPSSHLPPAFHYPKFLLPPYGMGINNFN
LFPRMYPFCSGLIGGRSISNHMLNSSALPSSLPSDGSRQPLQPDHPRDFLIPAHNSAFSI
TGAAASMKDKPCSPTSGSPTAGTAATSEHIMQPKPTSAVVAATSSEEAMNLIKSKRNMTG
YKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCTTCNKGFTQLAHL
QKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCTAKFTQFVHLKLHK
RLHTRERPHKCIHCHKSYIHLCSLKVHLKGNCPVVPASNLSTEDLNRINEEIEKFDISDS
ADRLDDVEDNIDMASVVETEILAVLRREIEGASLKASLQRNLGNGLVSSGCNLYESSDMS
IVKLPHGHPLPRVPIKVKQETDEPMDS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaactgaagattggaaatctcttccatggctacacaaaggataccacactgtgt
aactcgtatattgtgaatcgaggagccctgggaaaagggacaaaatcaataatgaaaatg
gatatgaaggatgctgacatgactctgtgggcagagactgaatttgaagataagtgtaca
tacattgtaaatgatcaccctgcagatcccagcactgaaggttgtaccataacccaggcc
gagtcgtccttgccaaggaacttgatttttaaatatgcaggaaatggcaaagaggttatt
ggagttattagcaaagaatatatccccaaaggaacacgctttggacctctggttggagag
atctataccaatgacacagttcctaaggatgcaaatagaaaatatttttggcggatctat
tctggggatgagtttctccatttcatagatggatttaatgaagaaaagagcaactggatg
cgctatgtaaatccagcccattctgttcaagagcaaaatctggctgcttgtcaaaatgga
atgaacatttacttttataccatcaagcccatccctgcaaatcaggaactgctcgtgtgg
tattgcagggattttgcagataggttgcactatccttccactggagatctagggatgatg
aatatcacaaaaagccatgttaatccaaagataactaatgacaaagatgaacttcatcag
aaaaatgttcccaaaagagagcacagtgtgaaggaaattctgaaaactgattccactcat
cctaaaggaaaggacttattccacacccatcttttgcaacctgcacaagaaaaagacttg
gagggcttaagaaaaaactgtagccctgaaaggcctttctatcctcgaattgtctaccca
attcgacctcacattccagaagattacctgaagacttctctgtcttgtgggattgagagg
cctagttacattgcccactcacccatccagtcttctaccacgccaagtccctcagcaaga
agtagcccagaccaaagtttaaaaagctcaagccctcacagcagtccaggagttacagtt
tcacctctaactcctatgtctcaagagtacagggaaccttattcttacttcaacggactc
tatagctccgaaggattagggtcatactctggatatgcaccctcgagccatcttccacca
gcctttcactaccccaagttcctgttaccgccatatggcatgggcatcaacaatttcaat
ctcttcccaaggatgtatcctttctgcagcggcctgattggtggaagaagcatctctaat
catatgctgaactcttctgccctaccaagttccttgccgtctgatggaagtcgccagccg
ttgcagcctgaccatccaagggacttcctcatccctgcacataacagtgccttctccatc
acaggagctgcagccagcatgaaagacaagccctgcagcccaaccagtggatcgcccaca
gcaggcacagcagctacttcagaacacataatgcaacctaaacctacctcagcagtggtg
gctgccaccagcagtgaagaagccatgaatctcatcaagagcaagcgaaatatgaccggt
tacaaaacccttccatatccactgaagaaacagaatgggaaaataaagtatgaatgcaat
gtctgctccaaaacctttggccaactctctaacctgaaggtccaccttcgtgtgcacagt
ggagaaagaccatttaaatgtactacttgcaataaagggtttactcagctggctcacctc
cagaagcactatctggtacacacaggcgaaaagccccatgagtgtcaggtctgccataag
cgatttagcagcacaagcaacctgaagacccatctgcgacttcactctggggagaagcct
tatcagtgcaagctttgcactgctaaattcacccagtttgtgcacctgaaactgcacaag
cgactccacaccagagagcgcccacacaagtgtatccactgccataagagctatatccac
ctttgtagcctcaaggtccacctcaagggcaactgccctgttgtccctgcatctaacctc
tctacagaggacctgaatcggatcaatgaagagatcgagaaatttgacatcagtgacagt
gcggacaggttggacgatgttgaggacaacattgacatggcatctgtggtggaaacagaa
atactggctgtactcaggagagagatagaaggagccagtcttaaagcatcattgcaaagg
aacctgggaaatgggctggtctcctcaggatgtaatctttatgaatcatcagacatgtca
attgtgaagttgcctcatggtcatccactacctcgggtacctataaaggtcaagcaagaa
acagatgaaccaatggactcctaa
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