Hemicordylus capensis (graceful crag lizard): 128340023
Help
Entry
128340023 CDS
T08891
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04140
Autophagy - animal
hcg04148
Efferocytosis
hcg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128340023 (VPS18)
04148 Efferocytosis
128340023 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128340023 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128340023 (VPS18)
Membrane trafficking [BR:
hcg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128340023 (VPS18)
Hops complex
128340023 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_5
zf-RING_16
zf-RING_Vps41
DUF2229
zf-RING_11
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
zf-RING_UBOX
PPR
DUF5600
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
128340023
NCBI-ProteinID:
XP_053140605
LinkDB
All DBs
Position
1:70791792..70807319
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDQYVDSLSHSASSQQSRTSLGIPHTGYVNARLEKETPIFNKQRIDFTPPEKINSL
VVSSNQLCMSLGKDIIFRIDLAKADEPNQVELGRKDEAKVHKLFLDHTGSHLIIALNTSE
CLYLNRSVQKVRLLSRWKGHLIESVGWNKFFGSETNTGPILVGTSQGQMYETEISVSEGS
LFGTNPDQYFRLIYNLEEEAGPAPVCCLEVERGIDGKCFIIATTRKRLFQFVGKVPEGGE
QQAFGTIFSMPADHLPGFREFPADLGYSEIAFYTPKLRSSPSAFAWMMGNGVLYGSLDYG
RPDSILSDEQVWEYPSDVDGAANKPISIVLTQFHFLLLFPDRVKAVCTLNGQVVFQDVFL
EKFGSLKRMIKDPSFGQIWIHTEKVVFRYNVQRESRDVWKMYMNINKFDLAKEYCKDRPE
CLDIVLAKEAEYCFQNKKYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLLKKLASL
KPSEKTQTTLLTTWLTELYLNRLGVLQGDSSKRDLYERTRDKFRSFLGSPRNKDCLFNNR
ATIHELLASHGDTEHMVHFAVIMHDYERVIAHYCQHDNYNEALEVLSRIKNEMLFYKFSP
VLIQHIPRKVVNAWIEMGKNLDATNLIPALVNYSQSESTQQISEAIRYMEFCVHELKETQ
QAIHNYLLSLYASCRPDSLLSYLEQAGTRADNIHYDLKYALRLCAEHGHHRACVHVYKVM
EMYEEAVDLALQVDVDMAKSCADLPDEDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
NLLKIEDVLPFFPDFVTIDHFKEAICNSLEAYNKHIEELKTEMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVYPNLPAYKQIKLEDLQK
KLSATSQPSKSHHCPKGTDPAGQGKSQPSREQMKADIDDIVAAECVYCGELMIQSIDKPF
IDPQRYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccattctggaccagtacgtggactcgctttctcactccgcctcctcgcagcag
agccgcaccagcctgggcattccgcacaccgggtatgtgaatgctcggctagaaaaggag
acaccaatttttaacaaacagaggattgatttcaccccacccgaaaaaattaatagccta
gtggtctcatctaatcagctgtgcatgagtcttggaaaagacataattttcagaattgat
cttgccaaagcagatgagcctaaccaggtagagcttgggcgaaaggatgaagccaaagtt
cacaagctctttttggaccatacaggatctcaccttatcatcgccttgaataccagtgaa
tgcctttatttgaaccgaagtgttcagaaggtgcgactcttgtcccgctggaaaggtcat
ttgattgaaagtgtgggctggaacaagttctttggttcagagacgaacacaggccccatt
ttggttggaacctcccaaggccaaatgtacgagactgagatttctgtcagtgagggcagc
ctctttggcactaaccccgaccaatatttccgcctcatttataacttggaggaggaggca
gggcctgctccagtctgctgtctagaggtagaacgagggattgatgggaagtgcttcatc
atcgccaccactcgtaagaggcttttccagtttgtcggcaaggtgcccgaaggaggagag
cagcaggcctttggcacgatctttagcatgcctgcagaccacctgcctggctttcgtgag
tttccagctgaccttggctacagcgaaatagcattctatactccaaagcttcgctcctct
ccaagcgcttttgcttggatgatgggaaacggggtcttgtatggatcgctggactatgga
cgtcctgactctattctgagcgatgagcaggtttgggagtatccttctgatgtagatgga
gcagccaacaagcccatttctatagtgctcactcagttccattttctgctgctctttcct
gatagagtgaaggccgtgtgcactttgaatggacaggttgtcttccaggatgtgttcttg
gaaaagtttggctcactgaagcgaatgatcaaagacccctcatttgggcaaatctggatt
cacacagaaaaggttgtgtttcgatacaatgtgcagcgtgaatcccgagatgtgtggaag
atgtacatgaatattaacaagtttgatttggccaaagagtactgcaaggaccgccctgag
tgcctggatattgtgctggcaaaggaggcggaatactgcttccagaacaagaaatatctg
gatagtgctaagtgttatgcattgacccaaaattattttgaggagattgcccttaagttc
attgaggccaagcaggaagaagcactgatggaatttctgctgaagaaactggctagcttg
aagccctcggaaaagactcagacaaccctcctaaccacctggttgacagagctgtatttg
aatcgcctgggggtgctgcaaggggactcttcaaaacgggacctctatgagaggacccgg
gacaagttccgtagcttcttgggcagccccagaaataaagattgcttgttcaacaaccgg
gcaaccattcatgagctgttggcaagccacggagacacggaacacatggtacactttgct
gtcatcatgcatgactatgagcgggtgatagcacactactgccagcatgacaactacaac
gaagcacttgaagtcctgtccagaatcaagaatgagatgctcttctacaagttctctcca
gtcttgatccagcatatccccaggaaagtggtgaatgcttggattgagatgggcaagaac
ctggatgcaacgaacctcatccctgcccttgtcaactacagtcagagtgagagcacccag
cagatcagtgaagccattcgctacatggagttttgtgtgcatgagctgaaggaaacacag
caggccattcacaactacctgctgtcgctctatgcttcctgtcgccctgactcactgttg
tcatacctagaacaagctggaacccgcgccgacaacatccattatgacctgaagtatgcg
ctccgcctgtgtgcagaacatggacatcaccgagcttgcgtccatgtgtacaaagttatg
gagatgtatgaagaagctgtggatctggcattgcaggtggatgtagatatggcaaagtcc
tgtgcagacctccctgatgaggatgaggagctgcggaagaagctctggctgaaaattgca
cgccacgttgtccaggaagagaaggatgtcaagaaggccatggcctgcctttctagctgc
aacctcttgaagatcgaagatgtccttccatttttcccagactttgtcactattgatcac
ttcaaagaagccatctgcaactctctagaggcctacaacaagcatatagaggagctgaag
acagagatggaggaagcaacgcagagtgccaaaaggatccgggaggacattcaggagatg
aggaacaaatatggctcagtggaaccacaggagaagtgtgcagcgtgtgactttccgctc
cttaaccgccccttttatctcttcctctgtggccacatgttccactatgattgccttctc
caggcagtttatccaaacttgccagcctataagcagattaaactggaggaccttcagaag
aagctttcggccacaagccaaccctccaaatcccatcactgccctaaagggacagatcct
gctggccaaggaaaaagccagcctagtcgggaacagatgaaagctgacattgatgatatc
gtggcagctgaatgtgtatattgcggagagctaatgatccagtccattgacaagcctttc
attgatccacagaggtatgaagaagagatgcagagctggctgtag
DBGET
integrated database retrieval system
