Hemicordylus capensis (graceful crag lizard): 128340335
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Entry
128340335 CDS
T08891
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcg03400
]
128340335 (GEN1)
DNA repair and recombination proteins [BR:
hcg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128340335 (GEN1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Pox_A11
Motif
Other DBs
NCBI-GeneID:
128340335
NCBI-ProteinID:
XP_053141301
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All DBs
Position
1:complement(274895702..274967517)
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AA seq
948 aa
AA seq
DB search
MGVTSLWQILEPVKQHVPLSSLRGKRLAVDLSLWVCEAQTVKKMVGVVTKPHLRNLYFRV
SSLTLMGVHLVFIMEGDPPKLKANTMHKRTEIRFGLPKKSGARRTGRSHFKSLLKECLEM
LECLGVPWLQAAGEAEAMCAYLNANGFVDGCITNDGDAFLYGAQTVYRNFTMNAKDPHVD
CYSISAIEETLGCSRESLIGLAILLGCDYLPKGVPGVGKEQALKLIRTLRGESLLQRFDH
WKNQFQYDDIPATAVKKVIHCAVCRHPGSRKDHERTGCQLCKSVGYCEPHDAEYCCPCDW
HTSEQNRQANSVEDSIRKKAKACEGFPFPEVIQEYIISKDKQMKLNACQRPNLLSFQKFA
FEKMDWTKHYACEKLCALLTYYDMNKRKSGHTSPQDLQALRIIRTRTKNGIPCFEIEWQK
PEHYTTEADQPMESFLITVEDSELFQAAYPEIVALYQMKKLEICKRKKKGKKTELKESEC
SAEDKEVADLFSRLNLQSAHETFPDHEPKFGFEMVSNCQMLPKNVSKSQDPFAAINLSST
VLQNQNPPDSLLVTASQNPGNECHSGSSLGPQAECMKQNTDCCDSSVIADLQLSGLDWEG
TSFSFSPMHVNVACLESDLGTSSISTRQHSPLFYKTAERPYLDSVQCDKDPPRSATCFVS
NDDFPKRQHHLHLKDQAVLKLSASEAFSKFQSVSLGKPLQVAKQMKRTSSPEGEFSSPSA
QLNDSTLEIENVLSKKYPRGLHLQNSKELKNPENSVQTAQKLVGSGTSESIGLCTVTLEP
TCSKNESLKLALKSAKVLSNCQLGTNSAQMILKRPLKKSVCQNRDSSEDSDNENTGRRKP
PGGPERERECNLLWRKDMYSNKRSNSELVLHMKQRGKEPNFKAIGTDLSVEKHPRPSSIV
SVLTSPSHTAPTLGVSYSHLQENESDSEVWADSPLPLSERLKLRQQSS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgactagtttgtggcagatcctggaacctgtaaaacaacacgtccccctcagc
agtcttagaggaaagaggctagctgttgacttgagtctctgggtatgtgaagcacagaca
gtcaaaaagatggttggagtagtcacaaaacctcatcttaggaatctttattttcgagtc
tcttctttaacactaatgggggtccatctggtatttatcatggagggagatcccccaaag
ctgaaagcaaacacaatgcataagaggacagagattcgctttggactacccaagaaatct
ggagcaagaagaacaggaagatcacattttaaatctctgttgaaagagtgccttgaaatg
ctggagtgcttaggagtcccttggcttcaagcagctggtgaagcagaggccatgtgtgct
tatctgaatgctaatgggtttgtggatggctgcatcactaatgatggggatgccttcctt
tatggtgcccaaacagtttaccggaattttacaatgaatgcaaaggacccacatgttgac
tgctattcaatatctgctattgaggagacgctaggctgcagcagagagtctctgattgga
ttagcaattctgcttggatgtgattatcttcctaagggagttcctggagttgggaaagaa
caagctttaaagttgattaggactttgagaggggagagcttactgcaaaggtttgatcac
tggaaaaaccaattccaatatgatgatatcccagctacagcagttaaaaaggtgattcac
tgtgctgtgtgccgccatccaggttcacgtaaagatcatgagcgcactggatgtcaactt
tgcaaaagtgtgggatactgtgagccccatgatgctgaatactgctgcccttgtgactgg
cacacctctgagcaaaaccgacaagccaactcagtggaggatagtattaggaaaaaagct
aaggcatgtgaaggctttccatttcctgaggttatccaagagtatatcatcagcaaagat
aagcagatgaagctaaatgcatgccaaagaccaaatttattgtcctttcagaaatttgct
tttgagaaaatggactggaccaagcattatgcctgtgagaaattgtgtgcccttttgact
tattatgacatgaataaaaggaaatctggtcataccagcccacaggacctgcaggcacta
cggataatcaggacacgaacaaaaaatggaattccttgttttgaaattgagtggcaaaaa
ccagaacattacactacagaagcagatcaacctatggaatcttttttaataacagtagaa
gactctgagttgtttcaggctgcatacccagaaatagttgccctatatcaaatgaagaag
ctggaaatttgcaagagaaaaaagaaaggtaagaagactgaactgaaagagagtgagtgc
tcagctgaagacaaagaagttgcagatctcttttcccggctaaatttgcaatctgcacat
gaaacctttccagatcatgaacccaagtttggttttgaaatggtttccaattgtcagatg
ttgccaaaaaatgtctccaaatctcaggatccatttgcagctataaacctttccagcaca
gttttgcaaaatcaaaacccaccagattccttgctcgtaactgcttcacaaaacccagga
aatgaatgccattctggtagttctttgggcccacaagcagaatgtatgaagcagaacaca
gactgttgtgactcttctgtgattgctgacctacagttgagtggccttgactgggaaggt
acatccttcagtttttctcctatgcatgttaatgttgcttgtttagaatctgatttgggc
actagtagtatttctacaagacaacattctccactgttctataaaacagcagaaagacca
tatttggattctgtacagtgtgataaagatccaccccgtagtgcaacctgctttgtttca
aacgatgactttcctaaaagacaacatcatctgcatttaaaagatcaagcagttctcaaa
ctttctgcttctgaagccttctccaagtttcaaagtgtgtctctaggaaagcctttgcaa
gtagcaaaacaaatgaagagaacgtctagcccagagggtgaattttcatctccatcagct
cagctaaatgatagcactctggaaattgaaaatgtgttatcgaaaaaatatccaagggga
ctccatttgcagaactctaaagaactcaaaaaccctgaaaattcagtacagacagcacag
aaacttgtgggttcaggcacctcagagtccataggcctctgcactgtaacactagaacca
acttgctcgaaaaatgagtcactgaagttggctctcaagtcagcaaaggtcctgagtaac
tgtcagcttggaacaaattctgcacaaatgattctgaagaggccgcttaagaagagtgtc
tgccaaaatcgtgattctagtgaagacagtgacaatgaaaatacaggtagaaggaagcct
cctggaggcccagaaagggaaagagagtgtaacctgctttggcggaaggacatgtacagt
aacaaaaggagcaacagtgaattggttcttcacatgaagcaaagaggaaaagagcctaat
tttaaagcaattggcactgatttatcagtggagaagcatcccagaccttcctctattgtg
agtgttctcacttctccaagccacacagcacctacattaggtgtatcctattctcatcta
caggagaatgagagtgattctgaagtgtgggccgatagtcccctgcctctgtctgaaagg
ctgaaactgagacaacagagcagttag
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