Hemicordylus capensis (graceful crag lizard): 128340407
Help
Entry
128340407 CDS
T08891
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcg03041
]
128340407 (DDX1)
03016 Transfer RNA biogenesis [BR:
hcg03016
]
128340407 (DDX1)
Enzymes [BR:
hcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128340407 (DDX1)
Spliceosome [BR:
hcg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128340407 (DDX1)
Transfer RNA biogenesis [BR:
hcg03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
128340407 (DDX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
128340407
NCBI-ProteinID:
XP_053141428
LinkDB
All DBs
Position
1:complement(277110856..277148757)
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTVKTGGGVLNKWQMNPYDRGSAFAIGSDGFCCQSREIKEWH
GCRSTKGVTKGKYYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTIGCYIDVDKGQIKFSKNGKDLGLAFEIPQHLKNQAIFAACVLKNAELKF
NFGEEDFKFPPKDGYVALDKAPEGNAVKSQHAGSAQVAQTKNLPNAPKALIVEPSRELAE
QTLNNVKQFKKNVDNPKLRELLIIGGVAAREQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHSQVPQITSDGKRLQVIVCSATLHSFDVKKLAE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKNDKIWERLGKNHIRTDEVHAKDNTRPGTN
TAEMWSEAIKILKGEYAIRAIKEHKMDQAIIFCRTKIDCDNMEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDISGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATDKEKVWYHSCPSRGKSCYNTRLKDEGGCTIWYNEMQLLG
EIEEHLNCTISQVESDIKVPVDDFDGKVTYGQRRAAGGGSYKGHVDMLAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttttcagagatgggtgttatgccagagattgctcaagcagtagaagaaatg
gactggcttctccctacagatattcaagcagagtcgattccattgattttgggaggtggt
gatgttctcatggctgcagaaactgggagtggaaaaactggtgcattcagcatcccagtt
attcagattgtttatgaaactctgaaggatcaacaggaaggcaaaaaggggaaaaccact
gtaaaaacaggtggaggagtgctcaacaaatggcaaatgaatccatatgacagaggatct
gcatttgctattggatctgatggtttttgttgccaaagcagagagataaaggaatggcat
ggatgccgatcaactaaaggcgtgactaaaggaaaatattattatgaagtgtcctgtcat
gaccaggggttgtgcagagttggatggtcctctatgcaagcttcgttagacttaggcact
gacaaatttggctttggctatggtggaactggaaagaaatctcataacaaacagtttgat
agctatggagaggaattcactatgcacgacacaataggatgctatatagatgttgataaa
gggcaaatcaaattttccaaaaatggaaaagatcttgggcttgcatttgaaatcccccaa
cacctaaagaaccaagcaatctttgcagcctgtgttctaaagaatgctgaattaaaattc
aactttggtgaagaagattttaagtttccacccaaagatggctatgttgctcttgataag
gctcctgagggcaatgctgtgaaatcgcagcacgcaggaagtgcacaagtggcccaaaca
aagaatctgccaaatgcacccaaagccttgatagtggagccatccagagagctagcagag
caaactctgaacaatgtgaaacaattcaaaaaaaatgttgataaccctaaattaagggaa
ctcctaattattggtggtgttgctgcaagagagcaactttccgttttggaacaaggggta
gacattgttgtggggactcctggaagactggacgatcttgtgtcaactggaaaactgaat
ttatctcaagttaggttcctggttcttgatgaggctgacggcctcctcagccaaggttat
tcagatttcataaacagaattcactctcaagttcctcagataacttcagatggaaagagg
ttacaggtgattgtgtgttcagcaactctgcattcatttgatgtgaagaaattagccgag
aagattatgcacttccccacttgggttgacttgaaaggagaagattctgtcccagagact
gtgcaccatgttgttgtccccgtgaaccccaaaaatgataaaatctgggaaagacttggt
aaaaatcacatccggactgatgaagtgcatgcgaaagacaatacaagacctggaactaat
actgcagaaatgtggtcagaagctattaagattttaaagggagaatatgccattcgtgcc
atcaaggaacacaagatggatcaggcgattatcttctgtagaactaaaatagattgtgat
aacatggagcaatacttcatgcagcaaggaggaggcccagataagaaagggcatcagttt
tcgtgtgtctgcttgcatggtgatagaaaacctcatgaaagaaaacagaatttggagcgt
tttaagaaaggagatgtcagattcctgatctgcactgatgtagctgctagaggaattgat
ataagtggtgttccttatgttatcaatgtcacacttcctgatgaaaaacagaactacgtt
catcggattggcagagtgggaagagctgaacgaatgggtctggctatttcccttgtggca
acagacaaagaaaaggtttggtatcattcatgtcccagtcgtgggaaaagttgttataat
acaaggttaaaagatgagggtggctgcaccatttggtacaatgaaatgcagctgctggga
gagatagaagagcacttgaactgtaccatttcccaggttgagtcagacattaaagtccca
gtggatgattttgatggcaaggtcacctatgggcaaaggagagctgctggcggtggatcc
tataaaggccatgtagatatgttggcacctacagtacaagaattggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctaccttcctaaccagctgttcagaacattt
tga
DBGET
integrated database retrieval system
