Hemicordylus capensis (graceful crag lizard): 128340937
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Entry
128340937 CDS
T08891
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X1
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcg03041
]
128340937 (DDX43)
Enzymes [BR:
hcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128340937 (DDX43)
Spliceosome [BR:
hcg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128340937 (DDX43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
MOEP19
KH_PNO1_2nd
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
128340937
NCBI-ProteinID:
XP_053142854
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All DBs
Position
1:306603098..306686465
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AA seq
676 aa
AA seq
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MSDWEADSDEDGPHGASTKPPPTLPAWRPAAAPPPPRARGNPDAGEDREESGGGKNWGSR
PASAREPWQSRPLEYRARGSSRGEDRERAPLCFPLDNALVGTLIGRGGTKIKELEESSGC
KIQVVKGNCEAMIKIFGGNDKQTKAKMLIDDLIERSSQGNAGERYTKDSFKHPDVGTICY
HDSSFGGLKSGYSSPKQSINWASLRENKAKYEAMKWADLPPIEKQFYRESPKIASMSQEE
ADKWRKENNNITCNDLKDGEKRHIPNPICKFEDAFEYYCDVMENIRKVGFQKPTPIQSQA
WPIILQGYDLIGIAQTGTGKTLAYLMPGFIHLDLQPIPREKRSGPGMLVLTPTRELALQV
EAECSKYSYKGFKSICIYGGGDRHGQISLVNKGVDIVIATPGRLNDLQMNNYINLRSITY
LVLDEADRMLDMGFEPQIMKILLDVRPDRQTVMTSATWPDGVRRLAKSYLKDPMIVYVGT
LDLAAVSTVEQKIVIIPEEEKRAFTRYFIDTMKSEDKVIIFVGKKLTADDLSSDFGLQGI
PVQSLHGNREQCDREQALEDFKKGRVRILIATDLASRGLDVQDITHVFNFDFPRNIEEYV
HRVGRTGRAGRTGEAVTLVTRNDWRIASELIDILERGNQVIPEELISMAERYKQFQLKKE
MERDLGRPRGRSRKGF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactgggaggcggacagcgacgaggacgggccccatggagcctccaccaagccc
cctcccactttacctgcgtggcgcccggcggcggctcctcctcctccacgggcccgtggg
aacccagacgcgggcgaagacagggaggaaagcgggggcgggaagaactggggttcgcgg
ccggcgtccgcccgcgagccgtggcagtcgaggcccttggagtatcgggcccgaggctcc
tcgagaggagaagacagagagcgcgcgccgctctgcttccctctggataacgctctcgtc
ggcaccctcataggtcgagggggaactaaaataaaagagcttgaagaatcttcaggctgt
aaaatacaggttgtaaagggaaattgtgaagctatgataaagatatttggtggtaatgat
aagcaaacaaaagccaaaatgctgattgatgaccttattgaaaggagtagccaaggcaat
gcaggagaaaggtatactaaagattccttcaaacacccagatgttggaaccatttgttac
catgatagtagttttggtggtttgaagtctggatacagtagtccgaaacagtctattaac
tgggcatcccttcgagagaataaagctaaatatgaagctatgaagtgggctgatttacct
ccaattgaaaaacagttttacagagaatcaccaaagattgcttccatgtcacaagaagaa
gctgataaatggagaaaagagaacaataatatcacatgtaatgacctgaaagatggtgaa
aagcgtcacattcccaatcctatctgtaaatttgaagatgcttttgagtattattgtgat
gttatggaaaatataaggaaagttggttttcagaagcctacaccaattcagtcacaggct
tggccaatcatacttcaaggatatgatctcattggaatagcacagactggtactggaaag
acattggcttatctaatgcctggatttattcatttggatttacagccaatacctagagaa
aaacgtagtgggccaggtatgttggttcttactcctactcgagaattggcccttcaggtt
gaagcagagtgttcaaaatattcttacaaaggatttaaaagcatttgtatatatggtggt
ggagacaggcacgggcaaatcagcttggttaacaaaggtgtggacattgttattgctact
cctggtagactgaatgaccttcaaatgaacaactacataaatctgaggagcataacatac
ttggtgttggatgaagcggatcgaatgctggatatgggatttgagcctcaaataatgaag
attttattagatgtacggcctgacaggcaaacagttatgaccagtgctacatggccagat
ggtgtccgccgtcttgcaaaatcatacttgaaagatcctatgattgtgtatgttggtact
cttgatttagcggcagtaagtacagttgagcagaagattgttattattccagaagaagaa
aaaagagcttttacacgttacttcattgacactatgaagtctgaagacaaggtcatcatt
tttgttggaaagaaacttactgctgatgacctatcaagtgattttggtcttcagggaatt
ccagttcagtccttacatggcaatagagaacagtgtgatcgtgaacaggctttggaggac
ttcaagaaaggcagagttcgtatactgatcgcaacagacttagcctctcgtgggcttgat
gttcaggatatcactcatgtgtttaattttgacttcccacgcaatattgaagaatatgtt
catagagtaggccgtactggacgagcagggcgcacaggagaagctgtaacacttgtaact
agaaatgactggagaattgcatctgaactgattgacattcttgaaagaggaaaccaggta
attcctgaggagctaatttcaatggctgagagatataagcagtttcagctgaaaaaagaa
atggaaagagatttaggacggcctcgtggtagatcacggaaaggtttttaa
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