Hemicordylus capensis (graceful crag lizard): 128341216
Help
Entry
128341216 CDS
T08891
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013
Nucleocytoplasmic transport
hcg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128341216 (PNN)
03015 mRNA surveillance pathway
128341216 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128341216 (PNN)
03041 Spliceosome [BR:
hcg03041
]
128341216 (PNN)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128341216 (PNN)
Spliceosome [BR:
hcg03041
]
Complex C
Other components
EJC/TREX
128341216 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
PH_RBD
Motif
Other DBs
NCBI-GeneID:
128341216
NCBI-ProteinID:
XP_053143427
LinkDB
All DBs
Position
1:complement(51235533..51247317)
Genome browser
AA seq
691 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPAQGRLLNITGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGATSRLAGERRTRRESRHESDAEDDDVKKPALQSSVVATS
KERTRRDLIQDQTMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNDHNVKIIKYIRTKTRPH
LFYIPGRMCPATQKLFDDSKKKLNALFETRRIEFAEQINKMEARPRRQSMKEKEHQEVQK
EEKKEDQNKEQEEGKVVQQVEEMETGNQSNDVEMEEIGEEKEVAASHSDEEIEQEEEEQK
EEMEIKVDEGVAIKENNRQEDSQEDIVLAKEEGENALPIDGEHNNVLETNEANNVEPLES
ENSKEIEPEIECNAQPEQECPVLSREKEEVSKPEAEPKPKEAEEKEPESTPVSEAEAQPQ
PEPVLWPQPPPLLETAQVQEPQVEKEETIVPEKLPETQADQVQAVTVELKNKIRSRSRGR
TRNKTSKSRSRSTSSSTSSTSSTSSSSGSSSSSGTSSSRSSSSSSSSTSGSSSRESSSSS
SSSESRSRSRGRGHNRDRKRRRSLDRKRRDNSGVDRSHKSSKGGSGRDAKGSKDKSSRSD
RKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtgcgggctctgcaggagcagctcgagaaggccaaggagagcctcaag
cacgtcgatgagaatatccgcaagctcacagggcgggaccccaacgatgtgcggcccgct
caaggcagactattgaacatcacaggccctggtggaggtaggggccgtgggagtttattg
ctgaggcgtggattctcggatagcggaggaggacccccagccaaacagagggacttagaa
ggagcgaccagtaggctggctggggagcgtcggacaaggagagaatcacgccatgaaagc
gacgcagaggatgatgatgttaaaaagccagcgttgcagtcttctgttgttgctacctcc
aaagagcgaacgcgtcgagaccttattcaagatcaaactatggatgaaaaagggaaacaa
aggaatcgacgtatttttggcctgttgatgggtactcttcaaaagttcaaacaagaatca
acagttgctactgagaggcaaaaaaggcgccaagaaattgaacagaaacttgaagtgcaa
gcagaggaagagagaaagcaagttgagaatgagaggcgggaactcttcgaggaaagacgt
gctaaacagacagaactgcggttactggaacaaaaagttgaacttgctcagttgcaagag
gaatggaatgatcataatgtcaaaattattaaatacataagaacaaagacaaggcctcat
ttgttctacatacctggcagaatgtgtcctgctacgcagaagttgtttgatgattctaaa
aaaaaactaaacgcactgtttgaaactaggcgcattgaatttgctgagcaaattaataaa
atggaagccaggcccaggcgacagtctatgaaggaaaaagaacatcaggaggtgcagaaa
gaagaaaagaaggaagaccagaacaaggagcaggaagagggtaaggtggttcagcaggtg
gaagagatggagacaggtaatcagagcaatgatgtagaaatggaagagataggggaggaa
aaggaggtagctgctagtcatagtgatgaggagatagaacaggaggaggaagaacagaaa
gaggaaatggagattaaagtagatgagggagtagcaattaaagagaacaacaggcaggag
gatagtcaggaggatattgtgttggcaaaagaggaaggtgaaaatgctttgccaatagat
ggtgagcataacaatgtattggaaactaatgaggcaaataatgtagaaccactagaaagt
gagaatagcaaagaaattgaaccagaaattgagtgtaatgctcagccagaacaggagtgc
cctgttctttcccgggagaaagaggaagtcagcaagccagaagctgaacccaaacccaag
gaggcagaagagaaggagcctgaatccactccagtatcggaggctgaggcccagcctcag
ccagagcctgtgctttggccacagcctccaccattactggaaactgctcaagttcaagaa
cctcaggtagagaaagaagaaactatagtgcctgaaaagctgcctgagactcaggcagac
caggtccaggcggtaactgtagaactcaagaacaagattaggagcaggagcagaggtaga
acaaggaacaaaactagtaagagtcgaagtcggagtacaagcagcagcactagcagtact
agctctactagtagcagtagtggcagcagttctagcagcggcaccagtagtagtcggagt
agttccagcagcagcagtagcacaagtggaagtagtagtcgagaaagtagtagcagttct
agtagcagtgagagcagaagccgaagcagagggcgtgggcataacagggataggaagcgc
aggaggagtctggatcgcaagcgaagggataattcaggtgtagatagaagtcacaagtct
tcaaaaggtggtagcggcagagatgcaaaaggatcgaaggataaaagttcaaggtccgac
agaaaaaggtctatatcagaaagtagtcggtcaggcaaaagaacttcacggagtgaaaga
gaccgtaaatcagacaggaaagacaaaaggcgttga
DBGET
integrated database retrieval system
