Hemicordylus capensis (graceful crag lizard): 128341767
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Entry
128341767 CDS
T08891
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128341767 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128341767 (HBS1L)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128341767 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
AAA_29
Motif
Other DBs
NCBI-GeneID:
128341767
NCBI-ProteinID:
XP_053144266
LinkDB
All DBs
Position
1:complement(350540047..350613773)
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AA seq
681 aa
AA seq
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MARHRNVRGYNYDEDFEEDDIYGQSVEDDYCISPSTAAQFIYSRRDNPLEEEYVSEDRAH
SNYCISSHQLTGVEKAKLDLCLVRMKEVLGESVPEKVMIEALLNSRFDVQQALDSVLSQN
SEQDMKTKDDETMSGGKTTKGKVRDSQTTRVESDVVPKVTKMTVSRKKKPAGFEVPCVTA
EENGHNAFTSQKGHSAGDANANMGVVEILPKPAPPSQTVQASEEQAMVPTPVKKSGKTKQ
QIDVKAELEKRQGGKHLLNLVIIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAG
KASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQAD
VAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFMEIVH
KLGQFLRQAGFKELDVAYIPTSGLGGENLVTRSQSSELNKWYEGKCLLEQIDAFKSPQRS
VDKPFRLCVSDVFKDQGSGFCVTGKIEAGYVQVGDRLLAMPPNETCTVKGIALHDEPVDW
AAAGDHVSLTLTGMDIIKINVGYVFCCPKEPIKACVRFRARVLIFNIEIPITKGFPVLLH
YQTVSEPATIRKLLNVLHKSTGEVTKKKPKCLTKGQNALIELQTQRPIALELYKDFKELG
RFMLRYSGSTIAAGVVTEIKE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcataggaacgtgcgcggctataactacgacgaagactttgaagaagatgat
atctatgggcagtctgtagaggatgattattgcatttcaccttcaacagctgctcaattt
atctattcaagacgggataatcctttggaagaagaatatgtttccgaagatagagcacat
agcaattattgtatttccagtcaccagctaactggagttgaaaaagctaagcttgacttg
tgccttgttcgtatgaaagaagtgcttggggagtctgttccagagaaggtgatgatagaa
gcactactgaacagcagatttgatgtgcagcaagctttggattctgtgctttcacaaaac
agtgagcaagatatgaagaccaaggatgatgaaactatgagcggaggaaagacaacaaaa
ggaaaagtcagagattcccagacaaccagggttgaatctgatgttgtaccaaaagttacc
aaaatgactgtgtctagaaagaagaaacctgcaggatttgaagttccatgtgtgactgct
gaagagaatgggcataatgcttttacatcacaaaaaggacactcagctggagatgccaat
gccaatatgggagtagttgagattcttcctaaaccagctcctccatctcaaactgttcaa
gcatcggaagaacaggctatggtaccaactccagtgaaaaagtctggaaaaacaaaacag
caaatagatgtgaaagctgagttggagaagaggcaaggagggaagcatctgcttaacctt
gtgataataggacatgttgatgcggggaaaagtactctaatgggccatttgttgtatctt
ctgggcaatgtgaacaaacgaactatgcacaagtatgagcaggaatccaagaaagctgga
aaggcatcatttgcctatgcatgggtcttagatgagacaggggaagaaagagaaagggga
gtgaccatggatgtaggtatgaccaaatttgagacaaagacaaaagttattacattgatg
gatgctcctggccataaagacttcattccaaatatgatcacaggagctgcacaggctgat
gtagctatattagttgtggatgccagcagaggggaatttgaagcaggatttgagactggt
ggacagacacgggaacatgggctattggttcgatctcttggagttacacagctggcagtt
gctgtcaataaaatggaccaggtcaactggcaacaggaaagatttatggaaatagtccac
aaacttgggcagttccttagacaagctggttttaaggagttggatgtagcttacatccct
acaagtgggcttggtggtgaaaatcttgtcacaaggagtcaatcaagtgagctgaataaa
tggtatgaaggaaaatgcttgctagagcaaattgatgctttcaagtcaccccaaagatca
gtggataaaccattcagattatgtgtatcagatgtttttaaagatcagggatcaggattc
tgtgtgactggtaaaatagaagcaggctatgtccaggttggagatcgactgctggcaatg
cctcctaatgaaacttgcactgtgaaaggaattgccctacatgatgagccggtggattgg
gctgcagcaggagatcacgttagtctcactttgactggcatggatatcatcaaaatcaat
gttggctatgtattttgttgtcccaaggaacctattaaagcctgcgtacgtttcagagct
cgggtcctcatcttcaatattgagatccccatcaccaaaggctttcctgtgcttttacat
tatcaaacagtgagtgagcctgccactattagaaagttattgaatgtgcttcacaagagt
acaggtgaagttacgaagaaaaaacctaagtgtctgactaaaggacagaatgctttaata
gaactgcaaacacaaaggcctattgctttggaactttataaagactttaaagaacttgga
aggtttatgttgcgctatagtggatccaccatagcagcaggagttgtcacagagattaaa
gaatga
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