Hemicordylus capensis (graceful crag lizard): 128341830
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Entry
128341830 CDS
T08891
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128341830 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128341830 (IRF1)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
128341830 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
128341830
NCBI-ProteinID:
XP_053144374
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All DBs
Position
2:complement(354575649..354592940)
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AA seq
312 aa
AA seq
DB search
MPQPRMRMRPWLELQINSNEIPGLIWINKEEKLFQIPWKHAAKHGWELERDACLFRNWAI
HTGRYKKGEVLPDPKTWKANFRCAMNSLPDIEEVKDRSISKGSSAIRVYRMLPASAKSQK
KEKKSKSLKIKNVRKSVEDIKTEETAEATNSIQLPDDHSGYILPSYQPEEMEAESTSITL
ELSSCDMNNTLTDWRRPLDIQLPDSTNDMYPLQVSPPTSSSDGTDEDDDKFNHFYQQLLN
SSDWHQTNVGGKGFLSNEPGTQNLYFDFCFQEQDAAADTSSETIQNDSKNSLEFSLLESL
RMTNLHPISCGM
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaccaagaatgcgcatgaggccttggctggaattgcagattaattccaatgaa
attcccggacttatctggatcaacaaggaagaaaaattgttccagatcccatggaaacat
gcagctaagcatggctgggagcttgaaagggatgcttgccttttcagaaactgggccatt
catactgggagatataaaaaaggtgaagtacttcctgatcctaaaacctggaaggcaaat
ttccgctgtgctatgaattcgttgcctgatattgaagaggtgaaggacagaagcattagc
aaaggttccagtgccattcgagtctacaggatgttacctgcttcagcaaagtcacagaaa
aaagaaaagaagtcaaagtccttaaaaatcaagaatgtgagaaagtcggttgaagatatc
aagacggaagagacagctgaagcaacaaacagtatccagctgccagatgaccacagtggc
tatattctacccagctatcaaccagaggaaatggaggcagaaagcacttccatcacgtta
gaactctcttcatgtgacatgaacaatacactgactgactggagacgcccactagatatt
cagttgcctgacagcacaaacgacatgtacccgcttcaagtctcgcctcctacttcatct
tctgatggaacagatgaagatgatgacaaatttaaccacttctaccagcagctccttaac
agctctgattggcaccaaaccaatgttggcgggaaaggtttcctcagcaatgagcctggc
acgcaaaatctctactttgatttttgcttccaagagcaggatgctgctgctgatacaagc
tcagaaacaattcaaaacgactcaaaaaacagcctggaattttctttgctggaatcccta
cgaatgactaatttacatcctatatcttgtggcatgtaa
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