Hemicordylus capensis (graceful crag lizard): 128342918
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Entry
128342918 CDS
T08891
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hcg01001
]
128342918 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128342918 (DCAF1)
Enzymes [BR:
hcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128342918 (DCAF1)
Protein kinases [BR:
hcg01001
]
Serine/threonine kinases: Other
Other
128342918 (DCAF1)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128342918 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
128342918
NCBI-ProteinID:
XP_053147086
LinkDB
All DBs
Position
2:323391834..323484548
Genome browser
AA seq
1494 aa
AA seq
DB search
MTSCSEYVDSKAELTALLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKRDPDPFDDR
HPGRADPKCMLGHLLRTLFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVAFVLQRLR
ELQVNEINTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVTGDMEISFNL
DSNHKTSSRVNSAIKKPEKQHERENFRKAKQKLGFSLDPEKMFVELSNSSWSEMSPWVIG
TNYSLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMIYIDLKRTNDVLLTFE
ALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMH
PHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGLRRLVNLISTL
DILNLANQGALMSDDEIFASRQTGKHTCMAMRRYFEAHLAIKVEQVKQSLQRTEGGILVH
PQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVPLMLLLISVACSWKTY
YARNDTVRYALDVLAILTVVPKIQLQLAESVDVLDEAESTVSTVGISIILGVAEGEFFIH
DAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAVRSSEHTLAKMWDVVQSNN
GIKVLLSLLSVKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEP
VLQDKRSEHVKFCKYAAELIERVSGKPLLMGTDVSLARLQKADVVAQSRISFPEKELLLL
IRNHLISKGLGETATILTKEADLPMTAASHSSAFTPLAATASPVSLPRTPRIANGISARL
TSHPSVGPSAASVHAQPKQTASQSSLALPGPSQASSSPVIGRISFIRERPSPCNGRKIRV
LRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPPFSLFTP
HQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDES
GFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYDCHNSAITHLETSRDGSLLLTSA
TWSQPLSALWRMKSVFEIKHSFTDDHYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTL
FNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISGVFHPNGLEVI
VNTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDLLEERMRSPFGSSF
RTFNATDYKPIATIDVKRNIFDLCTDSKDYYLAVIENQGSMDSMNMDTVCRLYEVGRQRL
AEDEEDEEEDQEEEEQEEDDDDDDDDTDDLDELDTDQLLEADLEEEENNENAGEDGENDF
SPDDDEELTNLLEEGDEGEDEDSDADEEVELILGDTDSSGNSDLEDDIILSLNE
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgacttcatgttctgagtatgtggattccaaggctgagcttactgctttgctggaacag
tgggaaaaagaacatggcagtggacaagacatggttcctatccttactcgcatgtcggaa
ttgattgagaaggagacagaagagtaccgtaagcgagatccagatccatttgatgataga
catcctggtcgagcagatccaaaatgtatgcttggccacttgctgagaacacttttcaag
aatgatgatttcatgaatgcgctggtgaatgcttacgtgatgaccagcagagagccaccg
ctgaatactgctgcctgccgactccttttggacatcatgcctgggctggaaactgcagtt
gtctttcaggaaaaggaaggaatagtcgagaatctcttcaagtgggcaagggaggcagat
cagcctttgagaacatatgcaactggattgctaggaggtgccatggagaatcaagatatt
gctgccaactacagagatgagaattctcaattggtggcatttgtgcttcagcgcctacgg
gagcttcaagtcaatgaaataaatacgaaacaggaaaacaagcggcccagtcctcgaaaa
gtgccatcagaccctttgttgcctttagatgaagaggctgtggacatggattatggagag
atggctgtggatggcgagcaggaggaagttacaggggacatggaaatctcatttaatctt
gattcaaatcacaagactagtagtagggtgaactctgccattaaaaaaccagagaagcag
catgaaagagagaattttcgtaaagcaaaacaaaaacttggtttctctttggacccagaa
aagatgtttgttgaactgtctaatagcagctggtcagagatgtctccgtgggtgattggc
acaaactatagtttatatcctttgacccctgctatagagcaaagactaattctgcagtac
ttaactcccctaggggagtaccaagagttgctgcccatcttcatgcaacttggatcaaga
gagctgatgatgatctatattgatttgaagaggaccaatgatgtgctgctcacttttgaa
gccctaaagcacttggcatcactgctgctccacaacaagtttgcaacagagtttgttgct
catgggggtgtacagaagctgctggagatccctcgtccttccatggcagctacaggtgtc
tctatgtgcttatattatttgtcttacaatcaggatgccatggaaagggtgtgcatgcac
ccccacaacgtgctatcggatgttgtgaactataccttgtggttgatggagtgctctcat
gcctcgggctgctgccatgctaccatgttcttctctatttgtttctcattccgtgcagtc
ttggagctctttgataggcatgatggcttaagacgcctagttaacttgatcagcactctg
gacatcttaaacctggcaaatcagggtgcactgatgagcgatgatgagatctttgccagc
cgccaaacagggaaacatacctgcatggccatgcgcagatattttgaggcacatcttgcc
atcaaagtggaacaggtgaaacagtcacttcagcgcacagaaggtgggattttggtccat
ccacagcctccatataaagcttgttcctacacacacgaacagattgtagaaatgatggaa
tttctaatagaatatgggccagcacagctgtattgggaaccagcagaggtctttctcaag
ctatcctgtgtgcctctcatgctcctgctcatttcagtagcgtgcagctggaagacctac
tatgctagaaacgatacggtgcgttatgctttggatgtcctggccatccttactgtggtt
ccaaaaatccagttacagttagcagaatcagtggatgtgctggatgaggcagaatctact
gtttccactgtgggcatcagcatcatccttggagttgctgaaggtgaatttttcattcac
gatgcagagatccagaaatcagcccttcagatcatcattaactgtgtgtgtggcccagac
aatcgcatctccagcattggcaaattcatctctggcacccctcgacggaagctcccacaa
gcagtccggagcagtgagcacaccctggccaagatgtgggatgtggtgcagtccaacaat
ggcatcaaagtgctgttatcgctgctgtctgtaaaaatgcccatcacggatgcagaccag
atccgagccttggcctgcaaagccttggttgggttgtcgcgtagcagtacagttcggcaa
atcatcagcaaactgcccctcttcagcagctgccagatccagcagctgatgaaggaacct
gtgcttcaggacaagcgcagtgagcatgtgaaattctgcaagtatgcggctgagctgatt
gagcgtgtctcaggaaaacctttgctgatgggcacagacgtctctctggcacggctgcag
aaagcggatgtggtggctcagtcaaggatttcgtttcccgagaaggagctgctcctcctg
atcaggaaccatcttatctcaaaagggctaggagaaacagccaccatcctaacgaaggag
gcagatctgcccatgacagcagcatctcattcctctgccttcactcctcttgctgccact
gcctctcctgtgtctctgcctcgtacccctcgtatagcaaacggcatttcagcccggttg
actagccatccttctgtaggccccagtgctgcttctgtccatgcccagcccaaacagact
gcctcccagagctcacttgcactcccaggcccgtctcaggccagcagctcgcctgtgatt
ggcaggattagcttcatccgagagaggccatctccctgcaatggcaggaaaatcagagtg
ctgcggcaaaaatcagaccatggcgcctacagccagagcccagctatcaaaaaacagctg
gaccggcacctcccttcccctcccacgctggacagtataatcacagaataccttagggag
cagcatgctcgctgcaaaaaccctgtggccacttgcccccctttctctctttttacaccc
caccagtgtcctgaaccaaaacagaggcgccaagcgccaactaactttacctcgcggctg
acccgcagggcagcttttccaaagtatggcggggtggatggtggatgctttgatagacac
cttatattcagcaggttccgtccaatttctgtgttccgggaagcaaatgaagatgaaagt
ggttttacatgttgtgcgttctctgcacgagaacgattcctgatgctcggcacctgcaca
ggacagctgaaactctacaatgttttcagtgggcaggaggaggccagctatgattgccac
aactctgccatcacacaccttgagacatccagggatggttccttattattgacatctgcg
acatggagtcagcctctctctgcattgtggaggatgaagtctgtctttgaaatcaagcat
tccttcacagatgaccactatgtggagttcagcaagcactctcaggacagggtcattggc
acaaagggagacatagcccatatctatgatattcagactggcaacaagcttttgactctg
tttaacccagaccttgccaacaactacaagaagaactgtgccacctttaaccctacagat
gaccttgtcttaaacgatggtgtcctttgggatgtccgctctgcacaggctatacacaag
tttgacaaattcaacatgaccatcagtggcgtgtttcatccaaatgggctggaagtcata
gtcaacactgaaatttgggacctgcggactttccacttgctacacacagtgccagccttg
gaccagtgccgtgtagttttcaaccatactggaacagttatgtatggagctatgttacag
gctgatgatgaagatgacctgctagaggagaggatgcggagcccctttgggtcgtctttt
agaacattcaacgcaacagactacaaaccaattgccactattgatgtgaaaaggaacatc
tttgacctgtgtacggactcaaaagattattatttggcagttatagagaaccaaggaagc
atggattccatgaacatggatacagtttgcaggctctatgaagtgggcaggcagcgcctg
gcagaagacgaggaggatgaggaggaagaccaggaggaggaggaacaggaagaagatgac
gacgacgacgacgatgacacggatgaccttgatgagctagacacagaccagctgcttgaa
gccgatctagaggaagaggagaacaatgagaatgcgggtgaagatggagaaaatgacttc
tctcctgatgatgatgaggaattgaccaacctgcttgaagaaggggatgaaggagaagat
gaagactctgatgcagatgaggaagttgagctgatccttggtgatactgacagctcaggc
aattcggatttggaagatgacataatcttgtctctgaatgagtga
DBGET
integrated database retrieval system
