Hemicordylus capensis (graceful crag lizard): 128343306
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Entry
128343306 CDS
T08891
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128343306 (SOX30)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128343306 (SOX30)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
128343306
NCBI-ProteinID:
XP_053148136
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Position
2:334997003..335021654
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AA seq
804 aa
AA seq
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MEKGAQEESPREQQRLLHPRAWQGTPCMDHLLLHPLPGQGTRDSHLLLFPTKQGSQHHLL
YPLSPKQNVLHREQKPPQPVGCREQQQQLVEDQACFGRQLSPAGSGVEPGGCEKQEEEES
GQQKVLQVKAEEQEQDSQLLLHSANKKKRGDHKAAANRRGGKEEGQTVGSSSLKGTEESR
REEPEGIKKEVKLKENCYAKTLESGNEGTIKTELVEPPEVDCKGREEEASKPHASSNGPA
LVSKDASLSHPLGMQQPQELKIPVTLHPVPPGARIQFQGPPPSDLIRVTKVPIAQVPLKM
QSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRDGHVKRPMNAFMVWARIHRPALAKA
NPAANNAEISVQLGLEWNKLTEEQKKPYYDEAQKIKEKHREEFPDSASSKNQFGGSSTQG
AVSKEFYQINLLDAGWVYQPRPGKRKRFPLTVSTVFSGTTQNIIATSPMAASTVFTGTSQ
NIITTNPTTIYPFRSPTYSVVIPSVQNSIGHQVCEAPSTIQLPAPSAQHPGPITLFQPNV
GSTTPLAAPPANMPIRPVLQPQRFVAPSPTEAHHVSSATNCTTKRPTQVSIESASRNPNN
TSTTHSRYSVSNSQPPKEYSSVSSCSRNGPIPQAPPIPHPHVYQPPPIAHPATLFGAPPR
FSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLGFYEDQYQKHEAMFSALNRD
YPFREYPDEHTHSEDSRSCESLEGTSYYSSHSQTEEEYLNPMPQLDIGALENVFTATPST
PSSVQQVNVTDSDDEEEGKVLRDL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagggggcgcaggaggaaagcccccgagagcagcagcgcctcctgcatcccaga
gcttggcagggcactccctgcatggaccacctcctcctgcaccctctaccaggacagggg
accagggactcgcaccttctgctcttccccactaagcaggggtcccagcaccacctcctg
taccccttgtcccccaagcaaaatgtcttgcacagggagcagaagcctccacagcctgtg
ggctgcagagagcagcagcagcagcttgtggaggaccaagcttgttttggcaggcaactc
tctcccgctggcagtggggtggagcctgggggttgtgaaaagcaggaggaagaagagagt
ggtcagcaaaaggtgttgcaagtgaaagctgaagagcaggaacaagacagccagttgctc
ttgcacagcgccaacaagaaaaaaaggggggaccacaaagctgctgcaaaccgccgtgga
gggaaggaggagggccagaccgtgggtagcagcagtttgaagggaactgaggaaagcaga
agggaagagcctgagggtatcaagaaagaggtcaagttgaaagaaaattgctatgccaaa
accctggagtcaggaaatgaagggaccatcaaaactgaactggtagagcctcctgaagtg
gactgcaaggggagggaagaggaggcatccaagcctcatgcatcctccaatggcccagct
cttgtcagcaaagatgctagtttatctcatcctctagggatgcagcaacctcaagaactg
aagattccagtgacactccatccagtccctcctggggccaggatccagtttcaggggccg
cctccatctgatctgataagagtgactaaagtgcctatagcacaagtgccccttaaaatg
cagtccttgcttgagccttcagtgaaaattgaaactaaagatgtgcctctcacagtgctg
ccctcagatgcagggatcccagatactccatttagcaaagacagagatggccatgtcaag
cgtcctatgaatgcatttatggtgtgggcaagaattcatcggccagctttagccaaagct
aaccctgctgccaataatgctgagataagtgtccagcttggtttggagtggaacaaactc
acagaagagcaaaagaaaccttactatgatgaagctcagaagattaaagaaaaacaccga
gaagaatttcctgactctgcaagttcaaagaatcagtttggtggtagttccacacaagga
gctgtctcaaaggaattctaccaaataaatttattggatgctggttgggtttaccaacca
cggcctggcaaaaggaagcggttcccactgacagtctccactgtgttttctggtactact
cagaatatcatcgctacgagcccaatggcagcctctactgtctttactgggacctctcag
aatatcattactacaaatccaactaccatttaccctttccgatcacccacctactctgtg
gtcatacccagtgtacagaacagcattggacaccaagtctgtgaagccccttctactatc
cagctgccagctccttctgctcagcatccaggccccattacgctgttccagccaaatgta
ggaagcacaacaccactggcggcaccaccagcaaacatgccaattcgcccagtgcttcag
cctcagcgctttgtagcaccgtcaccaacagaagctcatcatgtatcttcagcaacaaat
tgcactacaaagagaccgactcaggtttccattgagagcgcaagcaggaacccaaataat
acaagcaccacacactctcgatacagtgtctctaatagtcagccccctaaggagtactca
agtgtttcttcttgttctagaaatggacccattcctcaagctccacccatcccccatcca
cacgtctatcagcctcctcctatcgctcatccagccactctatttggagctcctcctcga
ttttcttttcatcatccttattttttacctggaccacattacttcccatcaagcacatgt
ccgtacagccgtcctccatttggctatgggaacttccccagctccatgcctgaatgcctt
ggcttctatgaagatcagtatcaaaagcatgaggctatgttttctgctctgaacagagac
tatccttttagagaataccctgatgagcacacgcatagtgaagactcacggagctgtgaa
agcttagaagggacttcctattacagcagccacagtcagactgaagaggaatatttaaat
cctatgcctcagctggacattggggcccttgagaatgtttttacagcaaccccatccaca
ccctctagtgtacagcaagtcaatgtgactgatagtgatgatgaggaagaaggaaaggtg
ttgagagatttgtaa
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