Hemicordylus capensis (graceful crag lizard): 128343519
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Entry
128343519 CDS
T08891
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcg03400
]
128343519 (APEX2)
Enzymes [BR:
hcg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
128343519 (APEX2)
DNA repair and recombination proteins [BR:
hcg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
128343519 (APEX2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
128343519
NCBI-ProteinID:
XP_053148688
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Position
2:186486934..186494126
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AA seq
518 aa
AA seq
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MRLVSWNVNGLRAGAGPAGLRRLLDSLGADVVCLQETKITRDLLEEPLAIVEGYNSYFSF
SRTRSGYSGVATFCKVCATPEAAEEGLSGLLTKQEGAVGCYGDTQDFTPEELQALDSEGR
TVLTRHRIRTSEQQETMLTIINVYCPRADPEKPERGDFKQRFYRLLQARAEALLRAGGHV
VIMGDINTAHKPIDHCDPGDLESFWDHPGRRWLDSFLWEPGKDSQDGKCFVDTFRFLHPT
QDDAYTCWCNVTGSRHLNYGTRIDYILADHVLVTSELKDAQLMPQVLGSDHCPVQAVLKG
VFLAAPRCPPLCTRFLPEFAGTQQKLSRFLVKVERTGLPEKGQKRGGAEPSIVGDSKKRR
AGRMQKGQGDLRSFFKAPNSQAGVTGGASCPTTENMIQRTTEDSGNGSVAMADGDGVEEV
VGSSNTAIESLRKKPKVGGDGEAKNCGNAAAALWKSLLSGPAPPPQCKSHGEPCVLRTVK
KQGPNCGRRFYVCARPQGKPSDPRARCDFFMWADRGNP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtgagctggaacgtgaacgggctccgagctggggcgggtcctgcagggctg
cggcgcctcctggactcgctaggcgccgatgtcgtctgcctccaagagaccaagatcacc
cgggaccttctggaggagccattggctatagtagaggggtataactcctacttcagcttc
agtcgcacccgcagtggctactcaggtgttgccacattctgtaaggtctgtgccacaccg
gaggccgcggaggagggcctgtctgggctgctcaccaagcaagaaggagcagttggttgc
tatggagacacacaggacttcacacctgaggagctgcaggcactggacagtgagggccgg
actgtgctcacccgccatcgtattcgcacctcggaacagcaggagaccatgctgacaatc
atcaatgtatactgcccccgtgctgacccggaaaagccagagcgtggagatttcaagcag
cgcttctatcgcctcctacaggcccgggcagaggctcttctcagagctggagggcatgtg
gtcatcatgggagacatcaacactgcacacaagcccatcgaccactgtgacccaggagat
ctggagtccttctgggaccaccctgggcgccgctggctggatagcttcctgtgggaacca
ggcaaggattcccaggatgggaaatgctttgtggacacattccgctttctccaccctact
caggatgatgcctacacctgctggtgcaacgtgacagggtctcggcacctcaactatggc
acccgcattgactacatcctggctgatcatgtcctggtcacatcagagctgaaagacgcc
cagctcatgcctcaagtgttgggctctgaccactgccctgtacaggccgtgctgaaaggt
gtcttcctggctgctccccgctgcccacccctctgcacccgcttcctgcctgagtttgct
ggcacccagcagaagctcagccgcttcctggtgaaagtggagcggactggcttgccagag
aaggggcaaaaacggggtggggccgagccaagcatagtgggggattccaagaagagacgg
gcaggccgaatgcagaaggggcaaggggatttacgtagtttcttcaaagcgcctaacagc
caagctggggtcactggtggtgctagttgcccaacgacagagaacatgatacagaggaca
acagaggattctgggaacggatctgttgccatggctgatggagatggggtagaggaagtt
gttggttcctctaacacagctattgagagtttgagaaagaagccaaaggtgggtggagat
ggagaagctaagaattgtgggaatgctgctgctgctttatggaagtcgttgctgtcaggc
cctgctcccccaccccagtgcaaaagccacggggagccctgtgttttgaggactgtgaag
aagcaagggccaaactgtggacggcgcttctatgtctgtgcccggcctcaagggaagcct
tctgatccccgtgcacgctgcgacttcttcatgtgggccgatcgaggaaatccttga
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