Hemicordylus capensis (graceful crag lizard): 128344066
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Entry
128344066 CDS
T08891
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128344066 (SCAF8)
03041 Spliceosome [BR:
hcg03041
]
128344066 (SCAF8)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128344066 (SCAF8)
Spliceosome [BR:
hcg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128344066 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
Motif
Other DBs
NCBI-GeneID:
128344066
NCBI-ProteinID:
XP_053149487
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All DBs
Position
1:364605484..364716165
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AA seq
1315 aa
AA seq
DB search
MEAVKAFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPGTTATMSNNTPGTPVTPATPANVVQSLPDPWV
SQITNTDTLAAVAQILQSPQGQQLQQLIQTLQMQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAAANPLNPLEQSVSFNKKLMDRFGDFGEEADINEEPKKETPTSQLPLVSESVNNS
LFHQLAEQLQQQNLEHLRQQLLEQQPSKQASPEETQEGNFGSEHSASPSQDSSHQPFLEV
ETNLDNSIDVQQQDMDIDEGQEAVEQEVFEQEEKKSAVLSRSRTRSRSRSRSPRKRRSRS
RSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTT
LWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSYRALQKLSSGSYK
IGSKIIKIAWALNKGVKTEYKQFWDADLGVSYIPWEKVKLDDLDGFAEGGMIDQETVNSE
WETARSSAEPVKEPVPTTQSATVDKTTAVTTQTETYTQSVTMLQIPVASAVPAVSLVPPS
FPVTMSVPPPGYSAIPPPPFLRASFNPSQPPPGYMPPPVPPPVVPPVVPTPLVQPSLPIT
QESMKDVPFSSLVLPVGTVSSSLTTPTLSARSIFTSLSSNKSEIDEKGSHVTDLQISSSE
NRTVQDDVSSSSGLIGGVQPPSISTTSGLLGGVQPPSVSSSSGLVQPPSVSSSSGLLTRV
QPPSVSSSSGLLTGLQPMTVSSSSNLLMGLQPPIVSSSSGLLTGVQPPIVSSSSGLLTAL
QPPIVSSNSGILGLPPPIVSSSSGLLGVPPPNISSGSGLLGLQLPTGIQNVPHLTLAGQR
LPGMPLVDMRPGLMPQPPGPRFPLLQPGMPPQRSIPPPAILDPSLPPPRAPFLPGDLFNQ
PERPFGISGRQGVDSISNPDKRLPLGDDSIQQEGDRDYRFPPVENRETVNRPSSVDIRDS
VGRPPLDPREGLGRPPADGREHFARSHMDLRENFGRPGMDNLGRRDHFAFNSDKHWGQRG
DYDEREHHAFPPYGGLKGFQEDRERYRQTNYRFETRSGPSWNRGLEQDTHRDFDDRRRPW
ERQRDRDDRDFNFGREINGNRFGRERIQNNWIPPPHPRAFEYFEGGTSQQKADSAPQVNG
ENAETESQPAAVQVEDEPELYEKLTTSRDIKKEKSDTEAELENEPVVESTETEGT
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaagcttttaacagcgagctatactcactgaatgactacaaacctcca
atatcgaaggctaaaatgacacagattaccaaggcagcaatcaaggctataaagttctac
aagcatgttgtacagagtgttgaaaaattcattcaaaaatgtaaaccagaatataaggtg
cctggcctgtatgtcattgactccattgttcgacagtctcgacatcagtttgggcaagaa
aaggatgtgtttgctcctagatttagcaataacatcattagcactttccagaatttatac
cgctgccctggggatgacaagagtaaaattgttagagtactaaatttgtggcagaagaat
aatgtgttcaagagtgaaattattcagcctctactagatatggcagcaggaattcctcct
ccagttgtgacccccgtcctgcctggtacaacagctactatgagtaataatacaccagga
actcctgtgacacctgctacaccagccaacgtggtgcaaagtttacctgatccttgggtg
tctcagataactaatacagatacccttgctgctgtagcacagatcttgcagagtccacag
ggccaacagcttcagcagttaattcagacactgcaaatgcaacagcagaagccgcaacca
tcactacttcaagcactggatgctggtcttgttgttcagttacaagctctcactgcgcaa
cttacagctgctgccgctgctgccaacccacttaatccactagaacagagtgtctccttt
aacaagaagctgatggacaggtttggggattttggggaagaagctgacattaatgaagaa
cctaaaaaagaaactccaacttcccaattgcctcttgtatctgaatctgtgaacaactca
ctttttcatcagctagcagaacagttgcagcaacaaaacttagaacatctccgtcagcag
cttctggagcagcagccttcaaagcaggcaagccctgaggaaacccaagaaggaaatttt
gggtctgagcattcggcatcaccctcgcaagacagtagccaccagccatttttagaagtg
gaaacaaatcttgacaattcaatagatgttcaacaacaggacatggatatagatgaaggg
caagaggctgttgaacaggaagtctttgaacaagaagaaaagaaatcggcagttctttca
agatcaagaacacgttcaagatctcgttcaagatctccaagaaaaagaaggtccagatca
cgatctggttctcgcaagcgtaagcatagaaaacgttcgcgttctagatcaagagaaaga
aagaggaagtcctcaaggtcatactccagtgaaaggagagctagagaaagagaaaaagaa
cgacagaagaaagggttgcctcctatacgatccaaaacactaagtgtgtgcagtaccacg
ctttgggttgggcaggtggacaagaaagccacacaacaagatttaaccaatttatttgaa
gaatttggacaaatagaatctataaatatgatccctcccagaggttgtgcatatgtctgc
atggtccatagacaagattcctaccgtgctcttcagaagctaagctctggatcctacaag
attggatctaaaattattaagattgcatgggctttaaataaaggtgtgaaaactgaatac
aaacaattctgggatgcggatcttggcgtttcatatataccttgggaaaaagttaaattg
gatgatttagatggctttgcagaaggaggcatgattgaccaggagacagtaaatagtgaa
tgggaaactgcaagaagctcagcagagcctgtgaaagaacctgtgcccacaacccagagt
gcaacagttgacaagaccacagctgtcaccacacaaacagagacatacactcagtctgtc
actatgctacagattcctgtagcttcagctgtgccagcagttagtttagttccaccatca
tttcctgttacaatgtctgtcccgcctcctggctatagtgcaattcctccacctcccttc
ttgagagcaagtttcaatccttcacaaccacctcctggttatatgccacctcctgttcca
cctcctgttgttccaccagttgtcccaacaccacttgtacagccttcactaccaattact
caagagtcaatgaaagatgttccttttagcagccttgttctaccagttggcactgtttca
agcagccttaccaccccaacattatctgctagaagtatttttacttccctttcaagtaac
aagtcagaaattgatgaaaaaggatcccacgttacagatcttcagatttcatctagtgaa
aacagaactgttcaagatgatgtttcaagcagctctggacttattggaggagtgcagcca
cccagtatctcaaccacttctggacttctagggggagtgcaaccacccagtgtctcaagc
agctctgggcttgttcagccgcccagtgtctcgagcagctctggtcttttgacaagagtt
cagccacctagtgtctcaagcagctctgggcttctgacgggactccagcccatgactgtg
tcaagcagttccaaccttctaatgggacttcagccacccatagtgtcaagtagctctggg
cttttgacaggagtccagccacccatagtgtcaagtagttctgggcttttgacggcactc
cagccacccattgtatcaagcaactcggggattctgggattaccaccaccaattgtctca
agtagttctggactgttaggtgtgccgccaccaaatatttcaagtggttctggacttcta
ggactgcagctacccactgggattcaaaatgttccccatttaactcttgctggtcaaagg
ttgcctggaatgcctctagtagacatgcgcccaggactaatgccacagccacctgggcca
agatttccactactacagccgggaatgccaccacagcgtagtattcctcctccagcaatc
cttgacccatcccttcctccacctagagctccttttcttccaggagatctttttaatcaa
ccagagaggccttttggaatttctgggaggcaaggtgttgatagcatttctaatccagat
aaaaggttgccccttggagatgacagcattcagcaggaaggggacagagattatcgcttt
cctccagtagaaaatagggagactgttaataggccctcttcagtggatattagggattct
gttggaaggccgccactagatccaagagagggtctaggaagacctccagctgatggaaga
gaacattttgccaggtcacatatggatttaagagagaattttggaagacctggtatggat
aaccttggtcgaagagaccattttgctttcaattcagataagcactggggacaaagagga
gattatgatgaaagagagcatcatgctttccctccatatggtggtcttaaagggttccag
gaagatcgagagcggtatcgacaaacaaactacagatttgaaacacgaagtggtcctagc
tggaatagaggactggaacaagatacccatagagactttgatgaccgtcgtagaccttgg
gaaagacagagggacagagatgacagagattttaattttggcagagaaattaatgggaac
agatttggcagagagagaatacagaacaactggataccccctccacacccaagagcattt
gagtattttgaagggggcacttctcaacaaaaagctgacagtgcaccgcaagttaatggt
gaaaatgcagagacagagagtcagccagctgctgtgcaagtagaagatgagccggaactt
tatgaaaagctgacaacttcacgtgacataaaaaaagagaagagtgacacagaagctgaa
ttagaaaatgaaccagtggtagaaagcacagaaactgaggggacataa
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