Hemicordylus capensis (graceful crag lizard): 128344150
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Entry
128344150 CDS
T08891
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128344150 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128344150 (ARID1B)
03021 Transcription machinery [BR:
hcg03021
]
128344150 (ARID1B)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128344150 (ARID1B)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
Helix-turn-helix
ARID
128344150 (ARID1B)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128344150 (ARID1B)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128344150 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
128344150
NCBI-ProteinID:
XP_053149709
LinkDB
All DBs
Position
1:365915054..366591232
Genome browser
AA seq
2477 aa
AA seq
DB search
MIMAAQVAAAPAGANKNKGKTPSLPANLSQDLNSGGPVAGTLGAAGSGALLGVGDGTNNS
SSSLNNVDHHLLHHHNELNMANNATSAAAATGNNNNATSSAGSSSDAVLKEPGSSSGFSS
PSSPPTMETGLLPNHKLKSVGGDRPAAAPPHHPHAQHHPQHPAHLHAQHHHAHHQHQHHH
ALLLLQQPPPPPPPQLNQFQQQPPPQHHPMQNNNNGGGGSNNNGGGGAAQPSSADMEQRQ
QHGGKDSGLGGQAEPQSQPQPQPLLNKGGDEEEATRTPPPADKMGEQHLSSRYDHPSLGP
LGGQQQQQPPPPPPPQGAGSGGGAGGGGGGGGGGGGGGGPSAVGVSEFNSYYGNAGSSGG
GASSTSRAGPCFDQHGGQQSPGMGLMHPAAAPNSMDPLSNSHEGYANSQYNHYPGAYGRP
GSGSSAGGGAGVVAAAAAAAAAAGGGGGYGGSSSAFGVLSSPRQQHQQGMMLGPGGGSSL
GKASGTAGFQRFSGQNQHPSGATPTLNQLLTSPSPMMRSYGTGYPDYTNPSAAPSQQQVQ
GVVVAAAAAAAATPGSQQAAAGMGMGMGKDMGSQYGAANPAWAAAQQRNHPAMSPGNTGQ
TISRSQGNPMDPMVMKRPQLFAVGSNPHTPTQPSSPYPGQSYVPPGPQRFPIGMQARTPG
SMGGMQYPQQQMPPQYGQQGVSGYCQQPYYNQQPQPQHLPPQAQYLSQAQQRYQTQQDMS
QEGYGTRSQPPITQGKPNHEELNLIQQERPSSLPVEVLTSEDASFGLKDLSGSIDDLPTG
TEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRS
GPISPASIPGNQMSSQTPGSQSESSSHPALSQSPMPQDRGFMTSIQRNPQLSQYAPQQSG
PSMSPHPSPGGQMHSGIGSFPQSNSSGTYGTQMSQYGPQGNYSRQPTYSGVTNTSYSGPG
PGMGINANSQMHGQGPGQPCGTIPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGM
GPPMPTVNRKAQEAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGNA
QAPMMHQPDQYGQGSFPGMNQSSIMGSSSPYTQPMNNNSSLMNPQAPPYSMAPNMVNSST
APLGLADMMTPSESKLPIPFKPDGKEDGPPQPENKKDSYSSQGISQPPTPGNLPVPSPMS
PSSASISSFHGDESDSIGSPGWPKTPSSPKSSSSTTTGEKITKMYELGNEPERKMWVDRY
LNFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSS
AASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQ
STGSNSMTEVPGDLKPPTPASTPHGQMTPMQGSRNSSVSVHDPFSDVSDSTFPKRNSLTP
NAPYQQTMNMPDMMGRMPYEPNKDPFGGMRKVPGNSEPFMAPGQMPNSGMQEMYNQTPSG
AMSNMGISQRQQFPYGSGYDRRSDHGLGPEGSMGAPGQSNMVPSNSDPSMYSPNRYPGQQ
RHEPYGQQYPAQAPPSGQSPYGGHQPGMFPQQQNYKRHMDGMYGPPAKRHDGDMFNMQYG
NQQQDMFNQYSSAYSGPDRRPIQGQYPYPYNRERMQGPGQMQQHGIPPQMISGPMQSSAS
SEGPQQNMWPTRNDMSYPYQNRQGPGGPAQAPPYPGMNRAEDMMVPDQRINHESQWPSHV
NQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFPRSHENRMSPSKSPFL
PSMKMPKVMPTVPQVAGPPTQSAPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAW
RVMMSLKSGLLAESTWALDTINILLYDDTTVATFNLSQLSGFLELLVEYFRKCLIDIFGI
LLEYEVGHPGPKLLDHNSIQKEDGQSVTQDARKEDDNDDECIYYYDEFEDEEEEEEDENE
NENTEGEEKSTVLAPPGATVDPSERPKQASKFDKLPIKIVKKNNLFVVDRSDRLGRVQEF
NSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPLPLNSSSKNKNMERKGDSEDQQDKS
ISATIDDVLSARPGALSEDSDSGSQTDSSKFPFGIHQAKSHRNIKLLEDEPQSRDETPLC
TITHWQDSLAKRCICVSNIVRSLSFVPGNDVEMSKHPGLVLILGKLILLHHEHPERKRAP
QTYEKEAEADKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGL
LHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLY
ATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQY
QQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVEENRSEFLLHEGRLLDISISALLN
SLVASVICDVLFQIGQL
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggctgcgcaagtggcagcggctccggcgggtgcgaacaagaacaagggcaaa
accccgagtttgccggcaaacttgagccaggacctcaactcggggggtcccgtggctggc
accttaggagctgctggatcaggtgctctcttgggggtcggagatgggactaacaacagc
agcagcagcttgaataatgtagatcaccatctcctccaccaccataatgaactgaacatg
gccaataatgcaacttctgctgctgccgccaccggtaataacaacaacgctaccagcagc
gccggctcttcctcggatgccgttttgaaagaacctggaagctcatcgggcttttcttct
ccttcctctcccccgactatggagacagggctgctccccaaccacaagttgaaaagcgtt
ggaggcgatcgccctgctgccgcacctccccaccacccccatgcccagcaccatccccag
cacccagctcacctccatgcccagcaccaccatgctcaccaccaacaccaacaccaccat
gcacttcttcttcttcaacaacctccaccaccaccaccaccacagctaaatcaattccag
caacagccgccgcctcagcaccatccgatgcagaataacaacaacggcggcggcggcagc
aacaacaacggcggtggcggcgctgctcagcccagcagcgcagacatggagcaacggcag
caacatggaggaaaagacagtggcttggggggacaggctgagccccagagccagccacag
cctcagcccctgctgaataaaggcggagacgaggaagaagcgacgcggacgccgccaccg
gcggacaaaatgggcgagcagcacctcagcagccgctacgaccaccccagcttgggacct
ttgggcggccagcagcagcagcagccgccgcctccgccgccacctcagggagcgggcagc
ggcggaggcgctggaggaggcggaggcggaggaggtggtggcggcggcggcggcggcccc
tcagcagtgggtgtctcagagtttaatagctattacggcaacgctggcagcagcggcgga
ggcgcctcctcaacgagccgggccgggccttgctttgatcaacatggcggacaacaaagc
cccgggatggggctaatgcaccccgcggcggcccccaacagcatggaccccctgtccaac
tcacacgaaggctacgccaacagccagtacaaccactaccccggcgcttacggccggcct
ggcagcggcagcagcgcgggaggaggagcgggagtcgtggcggcggcggctgcagcagca
gcagcagcaggaggtggcggcggctatgggggctcgtcctctgccttcggggtgctgagc
tcccccaggcagcagcaccagcagggcatgatgctgggccccggcggagggagcagcctt
ggcaaggcatctgggactgcgggcttccaaaggttctccgggcaaaaccagcacccgtct
ggggccaccccaaccttgaaccagctgctcacttcccccagccctatgatgaggagctat
ggcaccggctaccctgattataccaacccgagtgctgccccatcgcagcagcaggttcag
ggagtagtagtagcagcagcagcagcagcagcagccaccccaggaagccagcaggcagca
gcaggcatgggcatgggcatgggcaaggacatgggttcccagtatggagctgcaaaccca
gcctgggcagctgcacaacaaagaaatcatccagctatgagccctggaaacactggacag
accatcagcaggagccagggcaacccaatggatccaatggtaatgaaaagacctcagctg
tttgctgtgggtagcaaccctcatactccgacacagccaagcagtccgtatccagggcag
tcatatgtacctccaggaccacagcgctttccaataggaatgcaggcccggactccaggt
tccatgggaggaatgcagtacccacagcaacagatgccacctcagtatggtcagcaaggt
gtaagtggctactgccaacagccatattacaaccagcagccacaacctcagcatctgcca
ccccaggcccagtatctgtcacaggcccagcagaggtaccagacacagcaggacatgtct
caggaaggctatggaactaggtctcaacctcctatcacccaaggcaagcctaaccatgaa
gaactgaatctaatacaacaagagagaccatcaagcttaccagttgaagtcttgacctcg
gaggatgcttcctttggactcaaggatttatctggctccattgatgacctgcctacagga
actgaagccactctgagttcagcagttagtgcgtcaggttctacaagcagccaaggggag
cagagcaacccagcacagtcacctttctcccctcatgcctccccacatctctccagcatc
cctgggggcccttccccttcccctgtgggctctcctgttggaagcaaccagtcaagatct
ggtcccatttctcctgcaagtattccaggtaaccagatgtcatcccagactcctggtagc
caatcagaatccagctcccatcctgccttgagccagtccccaatgccacaggatcgaggc
tttatgacaagcattcagagaaatcctcagttgtctcaatatgcacctcagcaatctgga
ccctccatgtcaccacatccttcgcctggaggccaaatgcattctggaattggtagcttt
ccacagagcaattcaagtggtacttatggaactcagatgagccagtatgggccacaagga
aactactccagacagccaacttactctggagtgacgaacacaagttacagtggcccagga
cctggtatgggtataaatgccaacagccagatgcatggacaggggccaggccagccttgt
ggtaccatacctctgggacgaatgccatcagctgggatgcagagcagaccgtttcctgga
aatatgagcagtatgacccccaattctccaggcatgtctcagcagggaggcccagggatg
ggaccacccatgccgactgtgaaccgtaaggcacaggaggcagctgcagcagtaatgcag
gctgctgcaaattccgcccagagcaggccaccatacattaggtcgcctgcttatcccagc
cagtctggggctggcggacgccccatgttttcttcacagcaccccaactatggcaacgct
caggctcccatgatgcaccagcctgatcagtacgggcaaggcagttttcctggcatgaat
cagagcagcattatgggatccagctctccctacacccagccaatgaacaacaactcaagc
ctgatgaaccctcaagcacctccttacagcatggcacctaacatggtgaacagttccaca
gcacctctgggtcttgcagatatgatgactcccagcgagtccaagctacccattcctttc
aaaccagatgggaaagaagatgggcctcctcagcctgagaacaaaaaggatagctacagc
tctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtcc
ccaagctctgctagcatctcctcatttcatggagatgagagtgatagcattggcagccca
ggctggccaaagactccatcaagccctaaatcaagttcctccaccacaactggagagaaa
ataacaaaaatgtacgagctgggaaatgaaccagagcgcaaaatgtgggtggatcggtat
ctcaatttcatggaagagaggggtacacctgtggctagtctacccgctgtaggcaagaag
ccactggaccttttcaggctttatgtctgtgttaaggagattggaggtttagcccaggtt
aataaaaacaagaagtggcgtgaactggcgaccaacctgaatgttggcacttcaagcagc
gcagccagctccctgaaaaaacaatatattcagtacctgtttgcctttgaatgcaaaatt
gaacgaggggaggaaccccctccagaagtcttcagcactggagataccaagaaacaacct
aagattcagccgccatctcctgctaactcgggttcccttcaaggtccacaaacccctcag
tccacaggtagcaattccatgacagaagtgccaggtgacctcaagcctccaacaccagca
tctactcctcatggacagatgacacctatgcagggaagcagaaatagttctgtaagtgtg
catgatccattttcggatgtaagtgattccacattcccaaagcgaaactccctgacccca
aatgcaccctatcaacagacaatgaatatgccagatatgatgggaaggatgccctatgaa
ccaaacaaggacccttttggtggaatgagaaaagtgcctggaaacagtgaacctttcatg
gctcctggacaaatgcccaacagtggaatgcaggaaatgtataaccagactccttctgga
gcaatgtccaacatgggcataagccagcgccagcagtttccttatggaagtggttatgac
cggaggtcggatcatgggctgggtcctgaaggcagtatgggagcacctggtcaaagcaac
atggtgccttcaaacagtgacccaagcatgtactctcctaaccgttaccctgggcagcaa
aggcatgaaccatatggacagcaatatccagcgcaagcccctccttcaggacagtcacca
tatggaggacatcagcctggaatgtttccgcagcagcagaactacaaacgccatatggat
ggcatgtatgggcctccagcaaaacgtcatgatggagatatgtttaacatgcagtatggc
aaccaacaacaggatatgtttaaccagtacagtagtgcttattctggaccagacaggagg
ccaattcagggacagtatccatatccttataacagagaaaggatgcagggtccaggacaa
atgcagcaacatggaatacctcctcagatgatcagtggtcctatgcagtcatcagcctcc
agcgaaggcccccagcagaacatgtggcccacaagaaatgatatgtcttacccatatcag
aacagacaaggcccaggaggccctgcacaggccccaccttatccagggatgaaccgtgct
gaagatatgatggttcctgaccagaggataaaccatgaaagccagtggccttctcatgtt
aaccagcgtcagccttcttacatgtcatcctctgcctccatgcagcctatcactcgacct
cctcagtcatcctaccagacgccaccatcaatgccaaaccacatttcccgggcccctagt
ccagcgtcttttccacgctcccatgaaaaccgtatgtccccaagtaaatcccctttcctg
ccctccatgaagatgccgaaggttatgcccactgttccacaagttgcaggtcctccaaca
caatcagcaccaattaggcgggaaataacgtttcctccaggctctgtagaagcatcccaa
ccagtcttgaaaccaagacgaaagattacctcaaaagatatcgtgactcctgaggcttgg
cgagtgatgatgtctcttaaatccggccttctcgcagaaagtacttgggcattagacact
attaatatccttctgtatgatgacactactgttgctactttcaacctctctcagttatct
ggttttcttgagcttttggtggaatattttagaaaatgcctgatagatatttttgggatc
cttttggaatatgaagtgggacatccaggccccaaattactagatcataattcaattcag
aaagaggatggccaatctgtgacccaggatgccagaaaagaagatgacaacgatgatgaa
tgtatttattattatgatgaatttgaggatgaggaggaagaggaggaagatgaaaatgaa
aatgaaaacactgaaggagaagaaaagagcactgttcttgccccccctggtgccactgtg
gatccaagtgagaggccaaaacaagccagtaaatttgacaagctgccaataaaaattgta
aagaaaaacaacctatttgttgttgaccgatctgacagactagggcgcgttcaggaattc
aacagtgggctcctccactggcagcttggtgggggtgatacaactgaacatatccagacc
cactttgagagtaagatggagatccctcctcgcaggaggccacctctaccattaaactct
tcaagtaaaaataaaaacatggagaggaaaggagattctgaggatcagcaggacaaaagc
atatcagccaccattgatgatgtcttgtcagctcgtccaggagcattgtctgaagattca
gactctggttctcagacagacagcagtaaatttccatttggaatccaccaagccaagagt
catcggaatatcaagctgctagaggatgaaccacagagccgagatgaaactcctctatgc
accataactcactggcaggactctttggccaagcgttgcatctgtgtgtcaaatattgtt
cgcagtttgtcttttgtgcctggcaatgatgtcgaaatgtcaaaacatccaggcttggtg
ctgatcttgggaaagttgatccttcttcatcatgagcacccggaaagaaagcgtgcacca
cagacatatgaaaaagaggcagaggcggacaaaggggtggcctgcagcaaagatgagtgg
tggtgggattgccttgaggttttgagggataatacattggtcacattagccaacatttct
gggcagctagacttatctgcttacacagaaagcatctgtttgccaattttggatggctta
ctgcactggatggtgtgcccgtctgcagaggcacaagatccttttccgactgtggggccc
aactcagtcctgtcgcctcagagacttgtactggaaaccctgtgtaaactcagtatccaa
gataataatgtggaccttatcttggccactcccccattcagtcgtcaggagaaactctat
gctactttagttaggtacgttggggaccgcaaaaatccagtctgccgagagatgtccatg
gcactcttatcgaaccttgcccagggggatacattagcagcaagggcgatagccgtacag
aagggaagcattggaaacttaataagcttccttgaggatggggtcactatggcccagtac
cagcagagccagcataacctcatgcacatgcaacctccgcctctggagccgcctagcgta
gacatgatgtgcagggcagccaaggctttgctggccatggctcgggtggaggagaaccgc
tcagagttccttttacacgagggtcgtttgctggatatttcaatatctgctctcctgaac
tctctggttgcatctgtcatctgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
