Hemicordylus capensis (graceful crag lizard): 128344157
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Entry
128344157 CDS
T08891
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcg01009
]
128344157 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128344157 (HDAC6)
04131 Membrane trafficking [BR:
hcg04131
]
128344157 (HDAC6)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128344157 (HDAC6)
Enzymes [BR:
hcg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128344157 (HDAC6)
Protein phosphatases and associated proteins [BR:
hcg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128344157 (HDAC6)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128344157 (HDAC6)
Membrane trafficking [BR:
hcg04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
128344157 (HDAC6)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
128344157 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
128344157
NCBI-ProteinID:
XP_053149722
LinkDB
All DBs
Position
2:complement(186756717..186811487)
Genome browser
AA seq
1137 aa
AA seq
DB search
MMASDLGDAAILESPSVHLLETRAPSRKANKKGGLPEAKRKGRAKRLNKDAEELLAGLQR
LDLTTECAVPTGTGLVWDERMTEFHCLWDESFVECPERLVATRNKLLQRGLLERCIPVAA
QAVSEEEVLLAHSQEYLALMKSTELMSETELRSLSDMYDSVYLHPNSYRCACLAAGSVLH
LVEKVLAGELRNGLAVVRPPGHHAQHDKMDGYCMFNNVGIAAQYARQKLGVERVLIVDWD
VHHGQGTQYLFEDNPSILYFSIHRYEGGSFWPHLPESDSHAVGRGRGEGYSINVPWNQTG
MRDADYFSAFLHILLPVALEFQPQLVLVAAGFDSVIGDPKGEMAATPACFAHLTHLLMPL
AGGKLVLALEGGYNLDSLAEGTCAALKTLLGDPCPLLESPLTPCSSALRSVSQTLAAHSK
YWKNLRRISADVPQEDEGKENVAVPLGSPLPVAEILSRSAAELMQPLPLSCTGLVYDEKM
TEHYNMWDSQHPELPQRVSRIFQRHRELRLTERCSRLPARLASEEELRMCHSLAYVETVK
STATMKPRDLHRQGDQYNSIFICASSYECARLAAGSAFCAVEAVLSGKVRNAVAIVRPPG
HHAESDTACGFCFFNSVALAARYAQRLAGRPMRVMILDWDVHHGNGTQHMFENDPSVLYV
SLHRYDNGTFFPTSEDADYDRVGQGPGEGFTLNVPWNCPRMGDPEYLAAFHQIVMPVSYE
FNPELVLISAGFDAARGDPLGGCLVTPECYAHMTHLLLGLAGGKVAVVLEGGYNLESISE
SMAMCTRSLLGDPPPPLGRLKPPHPSALQSLARVTAVHRKYWASLRLEVPALLREKPRTR
AGKGTPIPNEISIDGPPELLASPTAQFMETVTEVIRSPMAPSVANVIASPTVQPVDDVDA
NLPVPPVVSVDDAVIALGSLQLEDHPTEESETASGSLSSDSSSVGGARQKVRCSPDKTEP
AEPTQSRDTSTGNSSGEAESPSKETEVSPPAFQPSPTEIILLDEATGGCSSFCELPGKDL
SDGGLFYAVTPLPWCPHLDLVLPVPPSGLNVWEPCAECGSQTENWVCLLCYKVGCGRYIN
QHMITHNLESGHPLALSFADLSVWCYVCQAYVHHPALFEAKSQAHKMKFGMDMAVPS
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttctgatttgggcgatgctgcaatattggagtccccctctgtgcaccttttg
gagacgcgagcaccttcgagaaaagcgaacaaaaaggggggactgccagaggcgaagcga
aaagggcgggccaagcgtttgaacaaagatgcggaggagctgctcgcaggcttgcagcga
ttggatctcaccacagaatgtgcagtacccacagggactggcctggtttgggatgagcgg
atgacagaatttcactgcctctgggatgagagtttcgtggagtgtccagagcggttggtg
gccacgcgaaacaaattgctgcaacgtggactcttggagcgttgcattcctgtggcggcc
caggctgtttctgaggaagaggtcctcttggctcacagtcaggagtacctggctctgatg
aaatccactgaactgatgagcgagactgagctgagatctctgtcagacatgtatgattcc
gtctacctacacccaaattcctaccgctgtgcctgcctggctgctggttccgttctgcat
cttgtggagaaggtgttggctggggagctccgtaatggactggctgtggtcaggccacct
ggacaccatgctcagcatgacaagatggatggctactgcatgttcaacaatgtaggcatc
gcagcccaatatgcacgacagaaactaggggtggagcgggtacttattgttgattgggat
gttcatcatggacaaggcacccagtacctctttgaggacaatcccagcatcctttatttc
tccattcatcgctatgaaggaggcagcttctggcctcatcttccagaatctgacagccat
gccgtgggccgagggcggggagagggctacagcatcaatgttccctggaatcagacagga
atgcgggatgctgattacttctctgcctttctacatattttgctgcctgtggccttggag
ttccagccccaattggtcttggttgctgctggctttgactccgtcattggtgaccccaag
ggagagatggcggccacccctgcctgctttgctcacctgacgcatctgctgatgccgctg
gctgggggcaagctggttctggctctggagggtgggtacaatcttgattccttggcggag
gggacctgtgcagccctcaagactctcctaggagacccctgtcctctgctggaatctccc
ctcactccatgtagcagtgccctccgctctgtgtcccagacgcttgcagctcacagcaaa
tattggaagaacctaaggagaatcagtgcagatgtgccccaagaggatgaaggaaaggag
aatgtagctgtgcctttgggcagccctctgccagtagctgagatcctgtccaggtcagca
gctgaactgatgcaacccctgccgctttcctgtacaggactggtttatgatgagaagatg
acggagcattacaacatgtgggacagccagcatccagagctgccccagagagtctcccgc
attttccagcgccacagggagctacgtctgacagagcggtgcagtcgactcccggcccgg
ctggcttctgaagaggagctgaggatgtgccacagtctggcctatgtggagaccgtgaag
tcaacagccaccatgaagcctcgagacctgcatcgtcagggtgaccagtacaattctatc
ttcatctgtgccagctcctatgagtgtgcccgactggcagctggttctgcattctgtgcg
gtagaggctgtgctttctggaaaggtcaggaatgctgtggccattgtccgtccacctgga
caccatgctgaatcggacactgcctgtggcttctgcttcttcaattcagttgccttggca
gcacgatacgcacagcgcctagctggacgacctatgagggtaatgatactagactgggat
gttcaccatggcaatgggacacagcacatgtttgaaaatgatcccagcgtcctgtatgtc
tccctccatcgctatgacaacggaacctttttccccacctctgaggatgcggactatgat
cgggtgggccagggacctggtgagggcttcacccttaatgtgccttggaactgtccccgc
atgggagaccccgagtacctggctgccttccaccagattgtcatgcctgtcagctatgag
ttcaatccagagttggtcctgatttctgctggttttgatgctgctcgaggggacccgctg
ggtggatgtcttgtgacaccagaatgttatgcacacatgacccatctcctcttgggcttg
gcaggtggcaaggtggcggttgtgctggagggtggctacaacctagagtcgatctcagag
tctatggccatgtgcacacgcagcctcctgggggatcctccacccccactgggacgcctc
aagcctccccatcccagtgccctgcagtctttagcccgtgttacagctgtgcaccgcaag
tattgggcaagtctccgactggaagtgcctgcccttctgagggaaaagcccaggactcgg
gctgggaagggaactcccattccaaatgaaatctccatagacggcccccctgagttgctt
gcaagtcctacagctcaatttatggagactgtgactgaggtgatcagaagccccatggcc
ccatctgtggctaatgtgattgcaagccccacagttcagcctgtagatgatgtggatgca
aaccttcccgttccgcctgtggtatcagtggatgatgcagtcatagctttgggctccctc
caattagaagatcaccccacagaggagagtgagactgcttcgggctctctttcttctgac
tccagttcagtgggtggggccagacagaaggtcagatgctctcctgacaagactgaacca
gcagagcccactcagagcagagacacgtcaacagggaattcctctggtgaagcagagtct
cccagcaaagaaacggaggtgagcccaccagctttccagccttctccaactgagattatt
ctgcttgatgaagccacaggaggctgttcttccttctgtgaactacctggaaaagatctg
tcggatggcgggctgttttatgccgtgacgcctctaccgtggtgccctcaccttgacttg
gtgctacctgtacctccatctggcttgaatgtatgggagccctgtgcagaatgtggcagc
caaactgagaactgggtctgtctgctttgctacaaggttggttgtggccgctatatcaat
cagcacatgataactcacaacttggaatctgggcatccactggcgctcagttttgcggac
ctctctgtctggtgctatgtatgccaagcctacgtccatcacccggctctctttgaagcc
aagagtcaggctcacaagatgaagtttggaatggatatggctgtaccttcctaa
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integrated database retrieval system
