Hemicordylus capensis (graceful crag lizard): 128344182
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Entry
128344182 CDS
T08891
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013
Nucleocytoplasmic transport
hcg03015
mRNA surveillance pathway
hcg03040
Spliceosome
hcg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128344182 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
128344182 (ALYREF)
03015 mRNA surveillance pathway
128344182 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128344182 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128344182 (ALYREF)
03041 Spliceosome [BR:
hcg03041
]
128344182 (ALYREF)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128344182 (ALYREF)
TREX complex
128344182 (ALYREF)
Spliceosome [BR:
hcg03041
]
Complex C
Other components
EJC/TREX
128344182 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128344182 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
128344182
NCBI-ProteinID:
XP_053149788
LinkDB
All DBs
Position
2:399125280..399130445
Genome browser
AA seq
254 aa
AA seq
DB search
MGDKMDMSLDDIIKLNRSQRGGGGRAGGGRGRGRGTAGRGGGGAGRGGAGRAGGSGPIRN
RAALTRGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDAD
IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV
TSQIDTQRRPIQSINRGGMTRNRGGSGGFGGGNRRGSRGNRGRGRGAGRSSKQQLSAEEL
DAQLDAYNARMDTS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaaatggacatgtctttggacgatattattaagttgaatcggagccagcgc
ggcggaggtggccgggccggcggcggccgaggccgggggagagggaccgccggccgaggc
ggtggcggggccgggcgaggtggagccggccgggcaggaggcagcggccccatccggaac
agagccgccctgacccggggaggcggcaggaacaggcccgcgccctatagccggccaaaa
caactccccgagaagtggcagcatgatctgtttgatagtggttttggtgccggcgctggt
gtggagacaggcgggaaacttctcgtctctaatctcgactttggcgtgtcagatgccgat
atacaggagctttttgcagagtttggaacgttgaagaaggcagcagtgcactatgaccga
tctggacgtagtctaggtaccgcagatgttcattttgagagaaaggcagatgctctgaag
gctatgaaacagtacaatggagtcccactggatggacgtcctatgaacatccagttggtt
acatcacaaatagatacacagaggagaccaatacaaagtataaatagaggaggcatgacc
agaaaccgtggtggctcaggtggctttggtggtggcaacagacgaggcagccgtggcaac
cggggcagaggcagaggtgctggaaggagttccaaacagcagctttctgcagaagagttg
gatgcacagttggatgcttataatgccaggatggacaccagttaa
DBGET
integrated database retrieval system
