Hemicordylus capensis (graceful crag lizard): 128344201
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Entry
128344201 CDS
T08891
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04110
Cell cycle
hcg04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128344201 (SMC1A)
04114 Oocyte meiosis
128344201 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcg03036
]
128344201 (SMC1A)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128344201 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
128344201 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
SlyX
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
128344201
NCBI-ProteinID:
XP_053149840
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All DBs
Position
2:complement(182918511..182959717)
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AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFRRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGSSSEYKINNKVVQLSEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEAEIEKLNK
ELGSKNKEIDKDKKRMDKVEDELKDKKKELGKVMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKQYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYIATSKQSLEEQKKLEGELTEEVELAKRRIDEINKELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQGREREMKELKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDEAEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGGSQGE
ETASSSQRTSNMYAREALIEIDYGDLSEDMKDVQAEDEIKQEMNQLQQKLNEQQSILQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNSCFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctcaagctgatcgagatcgaaaatttcaaatcttacaaagggcggcaaata
atcgggcccttccggcgcttcacagccatcatcgggcccaatggatccggcaagtcaaac
ctcatggatgccatcagctttgtacttggggagaagaccagcaatttgcgagtgaagacc
ctgcgagacttgatccatggagcccctgttgggaagccagctgccaaccgggcctttgtc
agcatggtctactctgaagagggtgctgaagaccgcacctttgcaagggtcattgtggga
agctcatcggagtacaaaataaacaacaaagtcgtccagctgagtgagtatagtgaggag
ctggagaaactgggcattctcatcaaagctcggaacttccttgtcttccagggggcagtg
gaatccattgctatgaagaaccccaaggagcgcacggcactctttgaggagattagtcgc
tcaggggagctggcccaggagtatgacaaacgcaagaaggagatggtcaaagcagaggag
gacacccagttcaattaccatcggaagaagaacattgcagctgagcgcaaggaggccaag
caggagaaagaagaggcggataggtaccagcgcctcaaggacgaggtggtccgagctcaa
gtccagctgcagctcttcaaactgtaccacaatgaagcagaaattgaaaagctgaacaag
gagctgggctcgaagaacaaagagattgacaaggacaagaagcgaatggacaaagtggag
gatgagctgaaggacaagaagaaggagctgggcaaagtgatgagggagcagcagcagatc
gagaaggagatcaaggaaaaggattcagagctgaaccagaaacgcccccagtacatcaaa
gccaaagaaaatacgtctcacaagataaaaaagctggaagctgccaagaagtccttacag
aatgcccagaaacagtacaagaagcgcaaaggtgacatggatgaactggagaaggagatg
ctgtctgtggagaaggcccgacaggaattcgaggagcgcatggaagaagagagccagagc
caaggccgggatcttacgctggaggagaaccaggtgaagaaataccatcggctgaaggag
gaggccagcaaaagagcggccactctggcccaggagctggagaagttcaaccgtgaccag
aaggccgatcaagaccggttggacctggaggagaggaagaaagtcgaaactgaggcaaag
ataaagcagaaattgcgggagatcgaggaaaaccagaagcgcattgagaagctggaggag
tacattgctactagcaagcagtccttagaagaacagaagaagctggagggggaactgaca
gaggaagttgagctggccaagcgccggattgatgagatcaacaaggagctgaaccaggtg
atggagcagctaggggatgcccgtatcgaccgacaagagaacagccggcagcagcgcaag
gccgagatcatggaaagcatcaagcgcctctaccctggctctgtgtatggacgtctcatt
gacctctgccagcccacccagaagaaatatcagatagctgtcaccaaggtgctgggcaag
aacatggatgccatcattgtcgactcagagaagactggccgggactgcatccagtatatc
aaggagcagcggggagagcctgagaccttcctgccccttgactaccttgaggtgaagccc
acagatgaaaagctcagggagctgaagggggccaagctggtgattgacgtgatccgctac
gagcctcctcacatcaagaaggccctgcagtatgcttgcgggaacgctttggtgtgtgac
aacgtggaggatgcccgccgcattgcttttggtggccatcagcgtcataagactgtagcc
ctggatggaaccctgttccagaagtcaggggtgatctccggaggtgccagcgacttgaag
gccaaggctcggcgttgggatgaaaaggctgtggacaagctgaaggagaagaaagagagg
cttacagaggagctgaaggagcaaatgaaggccaagcggaaggaggcagagctgcgccag
gtccagtcccaggcccacggcttgcagatgcgcctgaaatactcccagagcgacttggag
caaaccaagacccgccatcttgctctcaatctccaggaaaagtctaagctggaaagtgag
ctggccaacttcgggccccgcatcaacgacatcaagcgcatcatccaggggagagagcga
gagatgaaggagctcaaggagaagatgaaccaggttgaagatgaggtatttgaggagttc
tgccgggagattggggtgaggaacatcagggagtttgaggaggagaaggtgaaaaggcag
aacgagattgccaagaaaaggttggagtttgagaaccagaagacccgtctcggtatccag
ctggactttgagaagaaccagctgaaagaggaccaggacaaagtccatatgtgggagcag
acggtcaagaaggatgaggctgaaatagaaaaactcaaaaaggaagaacagaggcacatg
aagataatagacgagacgatggcgcaactgcaggacctgaagaaccagcacttggccaag
aaatcagaggtgaatgacaagaaccatgaaatggaggagatccgcaagaagctgggcgga
gccaacaaggagatgactcacttgcagaaggaagtgaccgccatagagaccaagctggag
cagaaacgcagcgaccgccacaacttgctgcaagcctgcaagatgcaggacatcaaactg
cccctctctaagggcaccatggatgatatcagccaggaggagggtggctcccaaggagag
gagactgccagcagctctcagaggacctccaacatgtatgcacgagaagctctcattgag
atcgactacggtgacctctctgaggacatgaaggacgtccaggctgaagacgagatcaaa
caggaaatgaaccagctacaacagaagctgaatgagcagcagagtatcttgcagcgcatt
gctgctccaaatatgaaggccatggagaagctggagagtgtgcgggacaagttccaagag
acctctgatgaattcgaggctgcccggaaacgtgccaagaaggccaagcaggcctttgaa
cagattaaaaaggagcgctttgaccgcttcaactcctgttttgagtcggtggccaccaac
atcgatgagatctacaaagccctatcacgcaacagcagtgcccaggctttcctgggccca
gagaaccctgaggagccttacctggatggtatcaattataactgtgttgctccgggcaag
cgcttccggcccatggacaacctgtctggtggggagaagacagtggcagccttagctctg
ctctttgccatccacagctacaagcctgctcccttctttgtcttggatgagatcgatgca
gctttggacaacaccaacattgggaaggtggccaattacatcaaggagcaatccacctgc
aacttccaggcaatcgtcatttccttgaaagaggagttctacaccaaggctgagagcctc
attggtgtctacccagagcaaggagactgtgtcattagcaaggtcctgaccttcgacctc
accaagtatcctgacgcgaacccgaaccccaatgaacaatga
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