Hemicordylus capensis (graceful crag lizard): 128344657
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Entry
128344657 CDS
T08891
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128344657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcg03009
]
128344657
Ribosome biogenesis [BR:
hcg03009
]
Eukaryotic type
Pre-60S particles
RNases
128344657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
128344657
NCBI-ProteinID:
XP_053151244
LinkDB
All DBs
Position
2:complement(126240029..126302221)
Genome browser
AA seq
1104 aa
AA seq
DB search
MLRSAGYFRSFSCPFDARGCRRPHCQYRHEAGRSEELSPAPPRQPLRGFPALGLGRNIQE
LERINKAIQSVKTEVEEEEKKLLYYNLGQDELQRSLTSAKNIRENVFSDEGSLNKSPIKE
KGHVNSISKVSSKSSKYILDHSCPSTDLEYDPLLNYTAGLLRSSLKEDENDRQYSKHMKM
FPCGNLQRSTKTSQHESRYGSPRKRSRSSSPIKLEIKLQESDDDVLIIDAPPVNVSKKPR
ISRTCKKNREENQVSSGTKVETLKNVATSASLHCTEEKRQEDTTVAQDYINQSDGNKTER
KSSANECFYLPYIKMNALNAGSKLDDDKKYHPPTKESISSASQMKIELNKEMFKEVLGKV
VSIKTCNVEQQVINQCSEDSSKAILLQETSKKVPEHLGKQSLQTCEKGEVSNNTQSRPLP
DLSENISHDAIFFPENIGEKQCDNLGYTNTKENCIIISDSSEKEDSEEDTEHSESDDTME
ECRRIFNEFVEHEAQKEKMAKKQALAMQTEVASDVKASMLPRQKRRIAHTAKFDVSTTKE
IIVPFKAPLPQQTSHSRILQAQQQAVQITAAVKSGQAFVAATCAPKKSASVIPATHIQSM
GPMVCLNMFEVQPVTTSSGQLNVLVPGNALTAVPCKLSSNPVKRIAPMPIKVSSRRRPSV
VPELGSKVPLDIRQRYVNFFVEELLKVCATVNEAFDKALIEEKAIYNRCGSKNMYLNIAV
NSLKKLRDHANISNGQPYGNKGTTSSGLRKQQKDDFTGITLYRLLKDYALTEEQLKENGY
PESNPEKPGSAMLCSSTVKPAVSDPSRRVCCRCGEIYTVTSSGNHVRKEECNYHSGRVLR
HKVPGGLETRYSCCEGIVGSPGCQVAKFHVHDGRNENRDGFVMTFIKPPPLDGNYGVFAL
DCEMCYTARGLELSRVAIVDPSLQVIYDTFVKPANEILDYNTRDGEDHISIRTAFHSPRA
ATEKARLCVVTRRTGSNWRRTSTDDLNGRFSGVTAEDMKNVVTSIRDVQAVLLNLFSADT
ILIGHSLENDLFALKLFHNKIVDTSVVFPHRLGAPHKRALRNLMADYLRRIIQDDVSGHD
CTEDASACMELMLWKVKEDTKGRR
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtccgcgggttacttcaggagcttctcctgccctttcgacgcccgcgggtgt
cggcggccccactgccagtacaggcacgaagcggggcgaagcgaagagttgtcccctgcc
cccccacggcagccgttgcgaggcttccctgcgctggggctgggtagaaacatccaagaa
ctagaaagaatcaacaaagcaattcagtcagtcaagactgaagttgaagaagaagaaaag
aaactattgtattataatttgggacaagatgaacttcaacgttctttgacatctgcaaaa
aatattagagaaaatgtattttctgatgaaggcagtctcaataagagtcctataaaagag
aaaggtcatgtcaattcaatctcaaaagtttctagcaaatccagtaagtatattctagac
catagctgtccatctactgatcttgaatatgacccgttacttaattatacagcaggtctt
ctgaggtcttctttgaaggaagatgaaaatgacagacagtattccaagcacatgaagatg
tttccttgtggaaacctgcaaagatctacaaaaacgtctcaacatgaaagtagatatgga
tctccaaggaagagatcaagaagttcttcaccaataaaacttgaaataaagcttcaggaa
tcagatgatgatgtgcttataatagatgctccaccagtgaatgtgtcaaaaaaaccaaga
ataagtaggacctgtaaaaagaacagagaagaaaatcaggttagttctggaactaaagta
gaaactctgaaaaatgttgcaacgtcagcatctttacattgtactgaagaaaagagacaa
gaagataccactgttgctcaggattatattaaccaaagtgatggaaataagactgagaga
aaatcttcagccaatgaatgcttttatttaccatatataaaaatgaatgcattgaatgca
ggaagcaaactcgatgatgataaaaaatatcatcctccaactaaagagagcatttcttct
gcttctcagatgaagattgagttgaacaaagaaatgtttaaggaagttttggggaaggtt
gtctctattaaaacatgcaatgtggaacagcaggttattaaccaatgttctgaagactct
tcaaaagctatactattacaagaaacttctaaaaaagtcccagagcatttagggaaacag
agtttgcaaacctgtgaaaaaggtgaggtttcaaataatacccaaagccgtcctttgcca
gatttgagtgaaaacatttctcatgatgcaattttctttcctgaaaacattggtgaaaaa
cagtgtgacaatcttgggtacacaaataccaaagaaaattgtataattatatcagactct
tcagaaaaagaggattctgaagaagatactgaacattctgaatcagatgataccatggaa
gaatgtcggagaattttcaatgagtttgttgaacatgaagcacaaaaggaaaaaatggca
aaaaagcaggcacttgcaatgcaaacagaagtggcctcagatgtgaaggcaagtatgcta
cctagacagaagagaagaattgctcacacagcaaaatttgatgttagtaccaccaaagaa
attattgtaccttttaaggcaccgcttccacaacagacttcccattccagaatattgcaa
gcacagcaacaggcagtgcaaataacagctgctgttaaaagtggccaagcttttgttgct
gcaacttgtgctccaaagaaaagtgcatctgtaataccagctactcacattcaaagcatg
ggacccatggtttgtttaaatatgtttgaagttcagcctgttacaacaagcagtggtcag
ttgaatgtactggtgcctggaaacgcattaacagcagtgccatgtaagctttccagtaat
cctgtaaaaaggattgctcccatgcctataaaggtgtcaagtcgaagaaggccttctgta
gttccagaactgggatccaaggtgccacttgacataagacaacgatatgtcaattttttt
gtggaagaactcttgaaagtttgtgcaacagtaaatgaagcttttgacaaggcgttgata
gaagaaaaggccatatataaccgttgtggtagtaaaaatatgtatctgaacatagctgtg
aattcacttaaaaaactgagggatcatgccaatatatcaaatggccagccttatggcaac
aaaggcactacttcctctggcttgagaaaacaacaaaaagatgattttacaggcatcact
ctctatagacttctaaaagactatgctctgactgaggaacagttgaaagaaaatggctac
cctgaatcaaatcctgaaaaacctggtagtgcgatgttatgcagcagcactgtaaaacca
gctgtatctgacccctccagaagagtttgttgtaggtgtggagaaatatatactgtaact
tcatcaggaaatcatgttcggaaggaagaatgcaactatcattctggtagagtattaaga
cataaagtacctggtggtttggaaacacgctatagttgttgtgaaggaattgttgggtct
cctggatgtcaggttgcaaagttccatgttcacgatggaaggaatgaaaacagggatggc
tttgtgatgactttcatcaaaccacctccacttgatggaaattatggtgtatttgcacta
gattgtgaaatgtgttatacagcacgtggtctggaactctccagagtggcaatagtcgac
ccttctcttcaagtcatctatgacacgtttgttaagccagctaatgaaatcctagattat
aatactagagatggggaggatcatatctcaataaggaccgcattccatagccccagggca
gcaaccgagaaggcccgtctctgtgtggtcaccagacgaactggcagcaactggagacgg
acctccacggacgacctcaatggacggttttctggagtgacagcagaggacatgaagaat
gttgtgacatccattcgagatgtgcaggcagtactactaaatttgttcagtgcagataca
attttaattggacacagtttagagaatgacttatttgctcttaagctatttcacaataaa
attgtggatacatcagtagtttttcctcatcgactaggtgcacctcataaaagagcactt
agaaatctaatggctgattatctcagaagaattattcaggatgatgttagtggtcatgat
tgtactgaagatgcaagtgcttgtatggagctaatgctttggaaagtaaaagaggacact
aaaggcagaagataa
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