Hemicordylus capensis (graceful crag lizard): 128344895
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Entry
128344895 CDS
T08891
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein
KO
K12600
superkiller protein 3
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128344895 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128344895 (SKIC3)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
128344895 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_14
TPR_16
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_8
TPR_11
TPR_9
ANAPC3
TPR_15
RPN7
ARM_TT21_C
BTAD
Fis1_TPR_C
ARM_TT21_2nd
DUF6384
TPR_5
TPR_30
DUF3788
TPR_20
TPR_6
Motif
Other DBs
NCBI-GeneID:
128344895
NCBI-ProteinID:
XP_053151889
LinkDB
All DBs
Position
2:complement(63460059..63544313)
Genome browser
AA seq
1566 aa
AA seq
DB search
MSSKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAQ
GAYRKAAELEPGQLLAWQGLANLYEKTNHTDAREDLINVYHKLLELYESTDKQKWCEVCR
KLVELYHQEKKYLQVARTWHKLIRIKREEGADNAELHELWKRLVQLLAECINLQDNETQQ
LLLNAFEEAVNSSDPIPSEEHQKLYREFIQCLSKLPHESSRLKKACKDMMALYPAVSYPL
EVLCLYFIQSGSFTEEALNGYKKLLDIDSRSGPALIGLGIRFLQEKQYEEAEKNLTEGLQ
QTNQCPVAWCYLGEVQVKMHKYNKAVHSCNQALKTLEQLNETSSSQQQKNLAHRFKAEAL
IKIPGADSAEEAINSLASVLDINNDPKLIALKGQACLNKGCTDEASKITQELKLAYPDLG
DAHCLEGLIHYTQKNYHEAEISFQTAIEKGPETADFHFCLGLTYWFMSEETRKEKTKALT
QFLKAAKMDSYLGTAFRYLGQYYRDIAGDKNRALGCYKKAFEKDKTDGEAGAAVVDLSTE
LGDLDTALDILTNVTEKASAGRAKWAWLRRGLYYLRAGQHSQAVADLQAALRADPKDPNC
WEALGEAYLSRGGYTTALKSFRKARELNPKSIYCIYKAAAIEQILGKYKDAIAEYQHILE
TSKDYVPALKGLGECYLRLARTALVDYLDGKALDYIEQSLDFLARAAKHRPEVSCLWKLI
GDACSSVCAVSPSKVHVKVLGFLVGQNTDKFALKKSDLLSLGGRCYGRGLKLMSSPNTWC
DLGINYYHQAQHLTAMGSKKNEISELLEKSVQCLKKSVRLDSKNHFYWNALGVVASCKGI
GNYALAQHSFIKSLQAEQINVVAWTNLGVLYLTSGNIEQAHEAFKVAQSLEPSYLTCWIG
QALIAETVGSYETMDLFRHTTELSMHTEGAKGYAHWVCSTLKDQTNRNTELYKYNILQMN
AIPAAQVALTKYTERIQNDACAFTMLGYLNEYLQLKKQAANAYQRAVVLLKNSEDKEQYN
VAMRNYGRSLCSLGHYDDAIQAYLSTPLTEFDDIVGIAQAYFKKGHSQESQKAYESALSI
AVYEQDKAYILTALAIMEYKQNRVDAAKTLLFKCSILQEPNMESLQALCTLGLIKQDATL
ATAALKELLKHIERKDNVYEWCLLTSAVYALQGRSLAAQRQVSKAVHSNPNNPALWSLLS
RLVPRLTPQHAKGGAVAGTVAHILDLNHGKKALLHTAVNQLALGCHTAEDKQNNTLKNIQ
KAAHLSPDDPAAWAVLLAACHAENTVACLHNRQPKRTDLGEMIVATISAKTKEKNLPASH
AQALEEWSLFQAITDLNETGRTSEAEALCTKGLKTFPEQPTLYLLLRQVQCKPLLQSRKE
LPDAILEELRKTVMSNSASVTAWHWLAQVYQSQGMMVAAEMCYRKSLQLASQQSNWNGKL
SSLLRLAKLALEICMANILNDHWPSLVQEAATEALKLSFCPLGLLLQALLQYNRKMGSRE
TRRMLERVVYQPGYPETISSVARWYLLRHLYAKDDYELIDTLVANAKANGDVRALELNKK
LSAAAS
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaaggaagtgaaagcagctttgaaaagtgccagagatgcaataaggaataaa
gaatataaagaagctctgaagcactgtaaggcagtattgaaacaggagaagaataactac
aatgcctgggtctttattgggctggcagctgctgagctggagcaacctgaccaagcccaa
ggtgcctacagaaaggctgcagaacttgaaccagggcagttgctggcgtggcagggctta
gcaaatttgtatgaaaaaacaaatcacacagatgccagagaagatttgataaatgtttac
cacaaactcctggaactctatgaaagtactgacaaacagaaatggtgtgaagtatgtaga
aagcttgtggagctgtatcaccaagaaaaaaaataccttcaggtggctcgaacctggcac
aagctaataagaataaaacgagaagaaggtgcagataatgctgaacttcatgagctatgg
aagagattggtccagttactggcagagtgtataaatctccaggacaacgaaactcagcag
ttgcttcttaatgcatttgaagaggcagtgaattcctcagacccaattccaagtgaagaa
caccaaaagctttacagagagttcattcagtgcttgtcaaaacttcctcatgagtcttct
agactgaagaaggcctgcaaagatatgatggctttgtatcctgctgtgagttatcctctg
gaagttctttgcttgtatttcattcagtcaggcagcttcacagaggaagccctgaatggt
tataaaaagcttcttgacattgactcaagaagtggcccagcccttattggtttaggaatt
cgattcctccaagaaaaacaatatgaagaagctgaaaaaaatctaacagaaggtttgcag
cagacgaatcagtgtccagtagcatggtgttacttaggagaggtacaagtgaaaatgcat
aaatataataaagctgtacattcttgcaatcaagctctcaagacattggaacaacttaat
gaaaccagttccagtcagcaacagaaaaaccttgctcatcgttttaaagcagaggccttg
attaaaattccaggcgccgactctgcagaagaagccataaattcccttgcttcggttttg
gatataaacaatgacccaaagcttattgcgcttaaaggccaggcctgcctaaataaaggc
tgtactgatgaagcttcaaagattacacaagaacttaaactggcatatcccgacctggga
gatgcccactgtcttgaaggtttgattcattacacacaaaagaattatcatgaagcggaa
ataagctttcagacagctattgaaaaaggacctgaaacagcagactttcatttctgccta
ggtctcacatactggtttatgagtgaagagacgagaaaagagaaaaccaaagctcttact
cagtttctgaaggcagcaaaaatggacagttacctgggaactgctttccgctacctgggt
cagtactacagggatatagctggagataaaaacagagctcttggctgctataaaaaggct
tttgaaaaagataaaacagacggagaagctggagcagcggtggtagacttgagcactgag
cttggagacctggatacagcccttgacatcttgacaaacgtaacagaaaaagccagcgct
ggaagagcaaaatgggcctggctacgtcgtggactttattatcttagagctggtcagcat
tcgcaggctgtggcagatttgcaggcagctctgagagcagatccaaaagatcccaactgc
tgggaagcgctaggagaagcatatttgagcagagggggctacacaacagcattaaaatct
ttccgaaaggccagagaactgaatcccaaatctatatattgtatttataaggctgcagcc
attgaacagattctaggaaagtataaagatgctattgcagaatatcagcacatcttggag
acatcaaaagactatgtccctgcactgaaaggtctgggagagtgctatcttaggttggca
aggactgctcttgttgactatctggatgggaaagctctggactacatagaacaatccctt
gattttttagcacgagcagcaaaacatcgccctgaagtatcttgcctttggaaattaatt
ggagatgcctgtagtagtgtttgtgctgtttcaccatccaaagtgcatgtgaaagtttta
ggattccttgttggccagaacacagacaaatttgcactaaagaaaagcgatcttctgagt
ctggggggaaggtgttatggcagaggattaaaactgatgtcctcaccaaacacatggtgt
gatcttgggataaattactatcatcaagcacagcaccttacagcaatgggtagtaagaag
aatgagatcagtgaactcctagagaaatctgtacagtgtcttaaaaaatctgtgagacta
gacagtaaaaaccatttttactggaatgccttgggtgtggtggcctcttgcaaaggtatt
ggaaactatgctcttgcacaacattcgttcattaaatctcttcaagctgaacaaattaat
gttgttgcctggaccaatttgggagtcttgtacttaacaagtggaaatatagagcaagca
catgaagccttcaaggtagcccagtctttggaaccctcctatttaacttgctggattggg
caggctcttatagcagaaactgttggcagctatgagacaatggacctcttcaggcacacc
acagaactcagcatgcatacagagggagcgaaaggctatgcccattgggtgtgctcaacc
ctgaaggatcaaaccaacagaaacactgaattgtataagtacaacattcttcagatgaat
gctattccagcagcacaagttgcgctgaccaaatatacagaaagaatccagaatgatgca
tgtgccttcacaatgcttggttacttaaatgaatatcttcagttgaaaaagcaagcagca
aatgcatatcaaagggcagttgtattgctgaagaattctgaagacaaagaacagtacaat
gtagccatgaggaattatggaagatcactgtgttctctagggcattatgatgatgccatc
caggcttacttgtcaactcctctcacagaatttgatgatattgttggaatcgcccaggct
tacttcaagaaaggtcattctcaggaaagtcagaaggcttatgagagtgcgctctccatt
gctgtttatgagcaagataaagcatatatcctgacagctcttgcaataatggaatacaaa
cagaatcgagtggatgctgcgaagaccctcctatttaaatgttctatattacaggaaccc
aatatggaaagtctgcaagctttatgtactttggggctgataaagcaagatgctacactt
gcaacagcagcacttaaggaattattgaagcacatagaaagaaaagataatgtttatgag
tggtgccttcttacatctgctgtctatgcattgcaaggcagaagtctggcagctcagaga
caagtttctaaagctgtccacagcaacccaaataatcctgccctgtggtctctcttgtct
cgactggtacctcgacttacaccacagcatgcaaagggtggagctgtagcaggaactgtt
gctcacatacttgatttaaaccatggaaagaaagccttgctgcatactgcagttaatcaa
ctggcattaggatgtcacacagctgaagacaaacaaaacaacacactgaagaatatccaa
aaggcagctcatctttctccagatgatcctgctgcttgggcagttctcctggctgcctgt
catgctgaaaacacagttgcttgtctgcataataggcagcccaagaggacagatttgggg
gaaatgattgtagctacaatctctgctaaaactaaagaaaagaatcttccagcttcccat
gcccaggctcttgaagagtggtctcttttccaggctattactgacttgaatgagacaggg
agaacctcagaagctgaggctctttgcaccaagggtttaaaaacatttcctgagcagcca
acgttgtacttgcttctaaggcaggttcagtgcaaaccacttttgcagtctcggaaagag
cttcctgatgccatcttagaagagctcagaaagacagttatgtcaaactctgcttccgtt
acagcttggcattggttagcacaagtgtaccagtctcaaggaatgatggttgctgcagag
atgtgttaccgaaaaagtctgcagctggcatcccagcagagcaactggaatgggaagctc
tctagtctactaagacttgctaagcttgctctggaaatctgcatggctaatattttgaat
gatcactggccatctttggttcaagaagccgcaacagaagctttgaaactttccttctgc
ccactgggccttctgttacaagcacttctgcagtacaaccgcaaaatggggtcaagggaa
actcggcgtatgctagagagagtggtgtatcaacctggatatccagaaacaatatcatca
gttgcccgatggtatctcctaagacatttatatgccaaagatgattatgaactaatagat
actcttgtcgcaaatgccaaagctaatggagatgtccgagctttggaactaaacaagaaa
ttgtcagcagcagcatcctaa
DBGET
integrated database retrieval system
