Hemicordylus capensis (graceful crag lizard): 128345278
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Entry
128345278 CDS
T08891
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03018
RNA degradation
hcg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128345278 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
128345278 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128345278 (LSM7)
03041 Spliceosome [BR:
hcg03041
]
128345278 (LSM7)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128345278 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
128345278 (LSM7)
Spliceosome [BR:
hcg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128345278 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
128345278
NCBI-ProteinID:
XP_053153005
LinkDB
All DBs
Position
2:complement(224770016..224776210)
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AA seq
109 aa
AA seq
DB search
MPVESNMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEY
MRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggaaagcaatatggcggacaaagagaagaagaagaaggagagcattttggat
ctctccaagtacattgacaaaaccatccgtgtcaagttccagggtggacgagaagccagt
ggtgtcttgaaaggatttgatccgctcctaaaccttgtgttggatggtaccattgagtat
atgagagatccagatgaccagtacaagctcaccgaggacactcgtcagttaggactggtg
gtttgcagggggacctctgtggttctcatttgcccacaggatggcatggaagctattccc
aaccccttcattcagcaacaagatggatag
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