Hemicordylus capensis (graceful crag lizard): 128345300
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Entry
128345300 CDS
T08891
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04137
Mitophagy - animal
hcg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128345300 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128345300 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128345300 (VCP)
03009 Ribosome biogenesis [BR:
hcg03009
]
128345300 (VCP)
04131 Membrane trafficking [BR:
hcg04131
]
128345300 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcg04147
]
128345300 (VCP)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
128345300 (VCP)
Ribosome biogenesis [BR:
hcg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
128345300 (VCP)
Membrane trafficking [BR:
hcg04131
]
SNARE
SNARE associated proteins
Others
128345300 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
128345300 (VCP)
Exosome [BR:
hcg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128345300 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
128345300
NCBI-ProteinID:
XP_053153063
LinkDB
All DBs
Position
2:1302715..1330762
Genome browser
AA seq
806 aa
AA seq
DB search
MASGADSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWQDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGSGGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagccgattccaaagctgatgacctatcaactgcaattctgaagcagaag
aaccggcccaatcggttaattgttgatgaagcaatcaatgaggacaacagtgttgtgtca
ctgtcccaggccaaaatggatgaactgcagctattcagaggagatacagtcctccttaaa
gggaagaagaggagagaggcagtttgtattgtcctgtctgatgacacctgctctgatgaa
aagatccgcatgaacagggttgtccgcaacaatttgagggtgcgccttggagatgtgatc
agcatccagccgtgtccagatgtgaagtatggcaagcgcatccatgtgctgcccattgat
gacacagtggaagggatcacagggaacttgtttgaggtctacctcaagccatacttcctg
gaagcatatagaccaatcagaaaaggggacatcttcctggtgcgaggggggatgcgtgca
gtggagttcaaggttgtggagacggacccgagcccatactgcatagtggctccagacact
gtcatccactgcgagggagagcccatcaagcgagaggatgaagaggagtccctgaatgaa
gtgggctatgatgacattggaggctgccgaaagcagctggctcagatcaaggagatggtg
gagcttccgctcagacaccctgctctctttaaggccattggagtgaagcctccccgtggg
atcctgctttatggcccaccaggtactgggaagaccctgattgcccgagcagtggccaat
gagactggagctttcttcttcctcatcaatggccctgaaatcatgagcaagctggcgggc
gagtcggagagcaacctgcggaaggcctttgaagaagcagagaagaatgctcctgcaatc
atcttcattgatgagctggatgccattgctccaaagagagagaagacgcatggtgaggtg
gaacggcgcattgtgtctcagttgctgacactcatggatggtctgaagcaacgagcgcat
gtgattgtaatggcagctaccaacagacctaacagcatcgatccagcactccggcgattt
ggccgctttgacagggaagtggatattggcattcctgatgctactggccgcctggagatc
ttgcagatccacaccaagaacatgaaactggctgatgatgttgatctggagcaggtggcc
aatgagacccatggtcacgttggtgcggacttagctgcgctttgttcagaggcagctctg
caggctatccggaagaagatggatctcattgacctcgaggatgagaccattgatgccgaa
gtgatgaactcgctagctgtgaccatggatgacttcaggtgggccctgagccaaagcaac
ccctcagctctgcgtgagactgtggttgaagtgccacaggtgacctggcaggacattgga
ggcttggaagatgtcaagcgagagcttcaggagcttgtgcagtacccagtagaacatcct
gacaaattccttaaatttggcatgactccctccaaaggggtgctgttctatgggcctcct
ggctgtggaaagaccttgctggccaaagccattgccaacgaatgccaggccaacttcatc
tccatcaagggtccagagctgctcaccatgtggttcggagagtcggaggccaatgtgcgc
gagatctttgacaaggcccgccaagctgctccctgtgtgttgttcttcgatgagctggac
tccatcgcaaaggcccgtggtgggaacattggggatggtggcggagctgcagacagagtc
atcaaccagatcctaacagagatggacgggatgtcgaccaagaagaatgtcttcatcatt
ggcgccaccaaccgaccagacatcattgaccccgccatcctgcgtcctgggcgcctggac
cagctgatctacatcccactgcccgatgagaaatctcgcgtggccattctgaaggccaac
ctacggaaatcacccgttgccaaggatgtcgacctggagttcttggcgaaaatgacaaat
ggcttctcgggagctgatctaacagagatttgccagcgagcctgcaagctggccattcgt
gagtctattgagagcgagatcagacgggagcgagaaaggcagaccaacccttcggccatg
gaagttgaggaggatgacccagttcctgagatccggcgtgatcactttgaggaggccatg
cgttttgcccgccgctcggtcagcgataacgacattcgcaaatacgagatgtttgcacag
accctacagcagagccgcggcttcggcagcttcagattcccgtcaggtaaccagggtggt
gctggaccaagccaaggcacaggaggcagtggcggtggaaatgtttacagcgaggataac
gatgatgatctctatggttaa
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