Hemicordylus capensis (graceful crag lizard): 128345415
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Entry
128345415 CDS
T08891
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03440
Homologous recombination
hcg03450
Non-homologous end-joining
hcg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128345415 (RAD50)
03450 Non-homologous end-joining
128345415 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
128345415 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcg03032
]
128345415 (RAD50)
03400 DNA repair and recombination proteins [BR:
hcg03400
]
128345415 (RAD50)
DNA replication proteins [BR:
hcg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
128345415 (RAD50)
DNA repair and recombination proteins [BR:
hcg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
128345415 (RAD50)
BRCA1-C complex
128345415 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
128345415 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
AAA_29
TolA_bind_tri
AAA_24
ORF239-like
Motif
Other DBs
NCBI-GeneID:
128345415
NCBI-ProteinID:
XP_053153280
LinkDB
All DBs
Position
2:354658748..354747284
Genome browser
AA seq
1330 aa
AA seq
DB search
MDILHRRWCLQEEEYSAKMSRIDKMSILGVRSFGVEDKDKQVITFFNPLTVLVGPNGAGK
TTIIECLKYICTGDFPPGTKGSSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVC
TQKGKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDREMIGALGVSKSVINNVIFCHQEES
NWPLSEGRALKQKFDEIFSATRYIKALETLRQVRLKQGQRVKECQVELKYLKLNKEKAHE
IQNQLTNREAQLAASKENVRSIENQLEPLKNRLTEIEQNLIKVMRLDNEIKALESRKEQM
EKDNQDLQQKMEKVFQGTDDQLRDMYQDHQKTVREKERRLTECQRELERANKECQRFNRE
KSELLVEQGRLQLQADRHQQNIRTRDSLIQSLAAQLELEGFERAPFNERQISSFHRLVKE
RQDKDMEAANQLMREFGEKETMKQQQIDEIRDKKTGLERTIDLKTDIQNKKHIEVKNMKH
ELNQLEGSSDRLLELDQELAKAKHELDEAQKNSNVEALETEIQGLQKEKTSLDTVLRKLD
KEMEQLNLNTSIITQMDMLKKDKADKEEQIRKIKARHNEELISLIGYFPNKRQLEDWLHS
KMKEINQTRDKLAKLNKELASAEQNKNHISTELRKKEEQLSSYEEKLFDVCGSQDFESDL
YKLQDEIEKTSKQRAMLAGATAVYSQFITQLTDEDQSCCPVCQRVFPTEAELQDVISDLQ
SKLRLAPDKLKATESELKRREKRRDEMMALKPVRQTVSELREKDIPDLRNRLQTLNREIQ
RIKGDVEEQETLLGTIMPEEESAKACLQDITLMERYQTDLRDVERRIAQQAAKLQGVDLG
RTLLQVSQEKQTKKHQWDTVTGKIELKQNLKQDQQNQIQCLKSTVNELKAEKIEISSRMQ
RRQQLEEQTVELTTEVQSLNREIKEAKEQILPLEKTLEKLQQEREELIDKKNKSYKMTHE
KINETKEKVKNIQNYLKEIENYIREGKDEYKQKKESELDEVKDQLAECEKRKERTNKEMG
TIRQDIDTRKIQERWLEDNLTLRKRNEDLKEVEDNIKQYMKEMGEMQVPQLKKDQQHLEG
KIEDLKRNHSLALGRQHGFEEEILRFKKELRDAQFKDAEEKYREMMIVMRTTELANKDLD
IYYKALDKAIMKFHSMKMEEINKIIRDLWQSTYRGQDIEYIEIRSDADENVSASDKRRSY
NYRVVMIKGDTALDMRGRCSAGQKVLASLIIRLALAESFCLNCGILALDEPTTNLDRENI
ESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLSRSEYVEKFYRIKKNLDQCSEIVKC
NVTSLVSYVH
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggatattttacataggcgttggtgcttgcaggaagaagagtattcagcaaaaatgtct
aggattgataaaatgagcattcttggtgtgaggagctttggagtagaggacaaagacaag
caagtgataactttcttcaatcctttaactgtcttggtgggaccaaatggtgctggtaaa
acgactatcatagaatgtctcaaatatatttgcaccggagatttcccacctggcaccaaa
ggaagctcatttgttcatgatccaaaggttgccaatgaaacggatgtcagagctcaaatt
cgacttcagtttcgtgatgttaatggagagcttgtagctgtccaacgatccatggtatgc
actcagaaaggaaagaaaacagaatttaaaactcttgaaggagtcattaccagaacaaag
catggagaaaaagtcagtctaagctccaaatgtgcagaaattgaccgagagatgattggt
gcccttggcgtttccaagtctgtgattaataatgtcattttctgccatcaagaagaatcc
aactggcccctaagtgaaggaagggctctgaaacaaaaatttgatgagatcttttcagca
acaaggtatattaaagccttggaaacgcttcgccaggtccgtctgaagcagggtcagcgg
gttaaagagtgtcaagtggaactgaagtacttaaaactgaataaagaaaaagcacatgag
atacagaatcagcttactaacagagaagctcaactggctgcctctaaggaaaatgtcaga
tctattgagaaccagcttgaacctctaaagaatcgtctgacagaaatagaacagaatctt
ataaaagtaatgagacttgataatgaaattaaagccttggaaagccggaaagaacagatg
gaaaaagataaccaggatttgcaacaaaagatggagaaggtttttcaaggaaccgatgat
cagcttagagatatgtatcaagaccatcagaaaacagtgagagaaaaagagaggagacta
acagaatgccagagagaactggaaagagctaacaaggaatgtcaaaggtttaacagggaa
aaatcagaactgttagttgaacaaggtcgtcttcagctacaagcagatcgtcaccaacag
aatattagaaccagggattcactaattcagtctttggcagctcagttggaattagaaggg
tttgaaagagcaccttttaatgaaaggcagattagcagttttcacagacttgtgaaggaa
agacaggacaaagacatggaagctgccaatcagttgatgagagagtttggagagaaggaa
acaatgaagcaacagcaaatagatgaaataagagacaaaaaaactggactcgaaagaacc
attgacctaaagacagacatccaaaataaaaagcatattgaagtgaaaaatatgaaacat
gaattgaatcaacttgaagggtcctcagataggctcttggagctagatcaggaacttgcc
aaagcaaaacatgagctagatgaagctcagaagaacagcaatgtagaagccttagaaaca
gaaatacaaggacttcaaaaagagaagacaagtttggacactgttcttcggaaattagat
aaagagatggaacagctgaacttgaatacttcaataataacccaaatggacatgctgaag
aaagataaggctgacaaagaagaacaaatcagaaaaataaaagccaggcacaatgaagag
ttaatctccttgataggatattttcccaacaaaagacaacttgaagattggcttcactct
aaaatgaaagagattaatcagacaagagacaaacttgccaagctaaacaaagaacttgct
tcagctgagcagaacaagaatcatattagtactgaactaagaaaaaaagaggagcaattg
tctagctatgaagaaaagctttttgatgtttgtggaagccaggactttgaaagtgatcta
tacaaacttcaggatgaaattgaaaaaacatccaagcagcgagccatgcttgcaggagcc
acagcagtctattcacagttcatcacacagttaacagatgaagaccaatcgtgttgtcca
gtttgtcagagggtcttcccaacagaggccgaactacaggatgtgataagtgatcttcag
tccaagctgcgccttgctccagacaaactgaaggcaacagagtctgagcttaagaggaga
gagaagagacgtgatgaaatgatggcacttaagcctgtcaggcaaacagtatctgaactc
agagaaaaagacatacctgacttaaggaacaggctacaaacgctcaacagagagattcaa
cgcattaaaggtgatgtagaagaacaggaaactctcctgggcacaattatgcctgaggaa
gaaagtgccaaagcatgtctgcaggatattacacttatggaaaggtaccagactgatcta
agagatgttgagcgaagaattgctcagcaggctgctaagctccagggagtggatttaggc
cgaactcttctacaagtgagccaagaaaaacaaacgaaaaaacatcagtgggatacagtt
actggcaaaatagaattgaagcagaatcttaaacaagaccaacaaaatcagatccagtgt
ctaaagagtacagtgaatgagcttaaagcagaaaaaattgaaatttccagtcgtatgcaa
cgtcgacagcagctggaagagcagactgtggagctgaccacagaggtgcagtccttgaac
agagagatcaaagaagcaaaggaacaaatacttcctttggagaaaaccttagaaaaacta
caacaagaaagagaagagttaattgacaaaaagaacaaaagttacaaaatgacacatgag
aagataaatgagactaaagaaaaggttaaaaatatccagaactacttaaaagagattgag
aattatattcgagaagggaaagacgaatacaaacagaaaaaggaatctgaacttgatgaa
gtcaaagatcaactagcagaatgtgagaaaaggaaagagaggacaaataaagaaatggga
accattagacaagatattgatacgcggaagatccaggagcggtggttagaagataatctt
actctgagaaaaagaaatgaagatctgaaagaagttgaagataacataaagcagtatatg
aaagagatgggggaaatgcaagtcccacagctgaaaaaggaccaacagcatttagagggg
aaaatagaggatttgaaaagaaaccatagcttggcacttggccgacagcatggatttgag
gaagagatccttaggtttaagaaagagctccgagatgcacagtttaaagatgctgaggaa
aaatacagagaaatgatgattgttatgaggacaacagagctggcaaacaaggaccttgac
atctactacaaagcgctggataaagcaataatgaaatttcatagcatgaaaatggaagaa
atcaacaaaataattcgtgacctttggcaaagcacatacagaggacaagatattgaatac
atagaaattcgatctgatgcagatgagaatgtgtctgcttccgacaagaggaggagttac
aattatagagtagtaatgataaaaggagacactgctctcgatatgaggggcagatgcagt
gctggccaaaaggtacttgcttccctcattattcgtcttgctctggcggagtccttctgt
ctcaactgtggcattcttgctttggacgagcccactactaatcttgatcgagagaatatt
gaatctcttgcacatgccctggtggagataataaaaagtagatcccagcagcgtaatttt
caactgcttgtgataacacacgatgaagactttgtggagcttttgagtcgttccgagtat
gtggagaaattctacagaattaagaagaaccttgaccagtgttcagagattgtgaaatgt
aatgtcacatctttggtatcttatgttcactag
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integrated database retrieval system
