Hemicordylus capensis (graceful crag lizard): 128345785
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Entry
128345785 CDS
T08891
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcg03036
]
128345785 (DDX4)
Enzymes [BR:
hcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128345785 (DDX4)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128345785 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128345785
NCBI-ProteinID:
XP_053154230
LinkDB
All DBs
Position
2:36130429..36250691
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AA seq
740 aa
AA seq
DB search
MDDDDWDTEITDNSSSRGGGGALPSFQPNFQKLGSFSAKANETSCNLIQNVKPIDIDDEP
SKAHQLTQGSGWRPGSQGSFSSGNRASWGDRHRGVSGKPNGEDKRTGGFGSGRTFGSRGR
LLASGNGFEERKSSGFEKGDVIDDEDSPSNRGFSRRGGFQGMSNITDARRGGRGSARGGQ
GGFGLSTDDQDGGQHSGFFGSKRGGFGASAGGFDNRVRGFGGRGGYKGCNEEITGGSGRT
INFNQDPWKSDGDAEGGPKVTYVPPPPPDNEDAIFAHYQTGINFDKYDNILVEVSGLDPP
PAILTFEEAGLCQTLVKNIARAGYFKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLI
PILAHMMRDGVTASQFKPQQEPECIIVAPTRELINQIFLESRKFAYGTCIKSVVTYGGTQ
MSHSIRQILQGCNILCATPGRLMDIIGREKIGLSKLKYLVFDEADRMLDMGFGPVMKQLI
SSPGMPSKDERQTLMFSATFPEEIQRLAGEFLKNEYLFVVVGQVGGACSDVQQTILQVSQ
YDKRDKLVEILNGIGDKRTMVFVETKKKADFIATYLCQEHIATTSIHGDREQREREEALH
DFRSGKCPVLVATSVAARGLDIEDVQHVINVDLPSTIDEYVHRIGRTGRCGNTGKAISFF
DPHSNSDIAQPLVKVLADAQQEVPAWLEEIACGGGGIGFSGPRGNMFASVDSRKAYQGKE
NRQSGGFAASNITAADESWD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgacgactgggacacggagatcacggacaatagctccagcagaggtggaggc
ggagccctgccctcctttcagcctaatttccagaagctgggcagcttctctgcaaaagca
aatgaaacttcatgcaacctcattcagaatgtaaagcccatagatattgatgatgaacct
agcaaagcacaccagcttactcaaggttctggatggcgtcctggcagccaagggagtttt
tcatctggaaaccgagcttcctggggtgatagacatagaggtgtaagtggaaaaccaaat
ggagaagacaaaagaactggtggatttggaagtggaaggacttttggaagcagaggtagg
cttcttgcatcaggaaatgggtttgaagaaagaaagtcttctggctttgaaaaaggagat
gttattgatgatgaagacagcccgtcaaacagagggttttcaaggagaggaggttttcaa
ggaatgagtaacatcactgatgcacgtagaggtggtagaggatcagccagaggtggccaa
ggaggatttgggctatctacagatgatcaagatggagggcagcattctggtttctttggt
tctaaaagaggagggtttggtgctagtgcaggtggttttgataatagagtaagaggtttt
ggtggtagagggggttataaaggctgtaatgaagaaataactggaggttctggaagaact
attaatttcaatcaagatccatggaaatcagatggtgatgcagaaggcggtccaaaagtg
acttatgtaccaccaccaccaccagataacgaagatgccatctttgctcattaccagaca
gggataaactttgacaaatatgataacatccttgtggaagtttcaggactagatccccca
ccagcaatattgacctttgaagaagctggtctctgtcaaactttagtaaagaacattgca
agagctggatattttaaacttactccagtgcagaagtatagtattcccattgtgctggca
ggacgtgatttaatggcatgtgcccaaacaggatctggaaaaacggcagcttttcttatt
ccaattttggctcatatgatgagagatggagttactgccagtcagttcaaaccacaacaa
gaaccagaatgtataattgtagcaccaactagagaactgataaatcagatcttcctggaa
tcaagaaaatttgcatatggaacttgtatcaaatcagttgtgacttatggaggtacacaa
atgagtcattcaattcgtcagatattgcaaggttgtaatatactatgtgctaccccagga
aggcttatggatattataggcagagaaaagattgggttgagcaaactaaaatatctggtg
tttgatgaagctgaccgtatgctggatatgggatttggcccagttatgaagcagttgatt
tcctctccaggcatgccatcaaaggatgaacgccaaacactaatgttcagtgccactttc
cctgaagaaatccagagattggctggagaatttttgaagaatgagtatttatttgttgtt
gttggacaagtgggtggagcctgcagtgatgttcagcagaccatacttcaagtgagtcaa
tatgacaagagagacaaacttgttgagattctcaatggtattggtgacaagcggaccatg
gtatttgtggaaactaagaaaaaagcagactttattgcaacctatctttgccaagaacac
atagcaacaacaagtatccatggtgatcgggagcagagagagcgagaagaagctcttcat
gatttccgttctggaaagtgccctgttcttgttgctacatcagtggctgcaagaggtctg
gatattgaagatgttcaacatgttataaatgtagacctcccttccacaattgatgaatat
gttcacagaattggacgaactggccgatgtggaaatacaggcaaagcaatttctttcttt
gatcctcactcaaatagtgatattgcacagcctctagtcaaagtgcttgcggatgcccag
caggaagtcccggcatggctagaagaaattgcttgtggtggtggtggaattggttttagt
ggtccaaggggaaatatgtttgcatctgttgattctagaaaggcttaccaaggcaaagag
aatcgacagagtggaggatttgcagcatcaaatataaccgcagctgatgagtcatgggat
tag
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