Hemicordylus capensis (graceful crag lizard): 128345812
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Entry
128345812 CDS
T08891
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128345812 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128345812 (TAF5L)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128345812 (TAF5L)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128345812 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
128345812 (TAF5L)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
128345812 (TAF5L)
STAGA complex
128345812 (TAF5L)
TFTC complex
128345812 (TAF5L)
SAGA complex
128345812 (TAF5L)
SLIK complex
128345812 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
TFIID_NTD2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
PEP5_VPS11_N
Ge1_WD40
PROPPIN
Beta-prop_IP5PC_F
WD_LRWD1
eIF2A
Mala_s_1-like
Nbas_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
128345812
NCBI-ProteinID:
XP_053154323
LinkDB
All DBs
Position
1:377990507..378015744
Genome browser
AA seq
588 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANIVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTLTIQDILSNFKLRAFLDNKYVIRLQEDSYNFLLRYLQ
SDNNNALCKVLSLHIHLDVQPAKRMDYQLYASGGSSRSESNGLEPTDMPASILQNEAALD
ILQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSSVKLWSLRSK
KLKSEPHLVDVSRIRLACDMLDEEDEDDNVGTEMKILRGHCGPVYSTRFLSDSSGLLSCS
EDTSIRYWDLGCFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLRI
YAGHLADVDCIKFHPNSNYLATGSADKTVRLWSTQQGNTVRLFTGHRGPVLSLAFSPNGK
YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRN
TYCNAPVDGSSSELVGVYTGQINNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtacgcacagaacagattcagatggcagtttcctgctacctcaaacgcagg
cagtacgtagactcagaaggtcctctgaaacaagggctgcgcctgtgtcagactgcagaa
gaaatggcagctaatctaacagttcaatctgagtcgggttgtgccaacattgtctctgct
gcaccctgcctagcagaaccacaacaatatgaagtacagtttgggcgtttacgcaacttt
cttacagattcagattctcagcacagccatgaagtgatgcctcttctgtatcccctcttt
gtctacctccatcttaacatggtccaaaatggcctaaagagcacagtggacagtttctat
agtcgcttccatggtatgttcttgcagaatgccagccagaaggatatcattgagcagttg
caaaccaccctaacaattcaagacatcctgtcaaacttcaagctccgggcatttctggac
aacaagtacgtcatccgcctccaagaagacagctacaacttcctccttcgctacctccaa
agtgacaacaacaatgctctttgcaaagtcctctccttgcacattcacttagatgtgcaa
ccagccaagaggatggactaccaattgtatgctagtggtggctcttcacgaagtgaaagc
aatggcctggagcccactgatatgcctgcttccatcctgcagaatgaggcagccttggac
atactgcaggatagcattaaaagagtcaaagatgggcctccctcgctcaccactatctgc
ttctatgcattctataacactgagcagttgctgaacacagcagagatctcgccagatagc
aagctgctggctgctggctttgacaattcgtctgtaaagctgtggagcttgcggtccaag
aagctgaaatctgaacctcatctggtagatgtgtcccgaatccgcctggcttgtgatatg
ttggatgaggaggatgaagatgataacgtgggtacagaaatgaagatactaagaggccac
tgtgggccagtatatagcacaaggtttctgtcggacagttcagggctcttgtcatgttca
gaagacacctccatcagatactgggaccttggatgtttcacaaacacagtgttgtaccaa
gggcatgcctatcctgtgtgggatctggacatcagtccttgcagcttgtattttgcaagt
ggttcccatgaccgcacagcaaggctctggtcatttgatcggacgtacccactgcggatc
tatgcaggtcatttggcagacgtggactgcattaagtttcatcccaattctaattacttg
gctacaggatctgcagacaaaacagtgcgactgtggagtacccagcaaggaaacacagtg
cgtctgttcacgggtcaccgtggcccagtgttgtcacttgcattttctccaaatggtaag
tatttggcttcagcaggtgaagatcagcggcttaagctgtgggacttggcttctggcacg
ctttacaaggaactgagaggacacactgataatatcaccagccttacctttagtccggac
agcagtttgattgcttctgcatctatggacaattctgttcgggtttgggatattcgaaac
acttactgcaatgcccccgtagatggctcttccagtgagctagttggtgtatatactgga
cagataaataatgtactgagtgtacagttcatggcctgcaaccttctcctagtgactgga
attgcacaagagaatcaggaacattaa
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integrated database retrieval system
