Hemicordylus capensis (graceful crag lizard): 128345865
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Entry
128345865 CDS
T08891
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128345865 (PTBP1)
03041 Spliceosome [BR:
hcg03041
]
128345865 (PTBP1)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128345865 (PTBP1)
Spliceosome [BR:
hcg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128345865 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
128345865
NCBI-ProteinID:
XP_053154439
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All DBs
Position
2:complement(213301699..213346248)
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AA seq
576 aa
AA seq
DB search
MVRRGRGGRGGGAILRRHFVSLYNTSPLSSLLLFRRLRSLRAAFVCNGRHCPRYNSWYKA
NGNDSKKFKGDSRSTGVPSRVIHIRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFI
EMNTEEAANTMVSYYTTVTPVLRSQSIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQS
GNLTLSASAAAIDAGMVMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN
NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDCSKLTSLNVKYNNDKSRDYTRPD
LPSGDSQPSLDQTMAAAFGAPGIISASPYAGFPPAFAIPQAAGLSVPNVHGALAPLAIPS
AAAAAAAAGRITIPGLTGAGNSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKE
NALVQMADGNQAQLAMSHLNGQKLHGKPIRITLSKHQTVQLPREGQEDQGLTKDYGNSPL
HRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDLKMLFSSNGGMVKGFKFFQKDHKMAL
IQMGSVEEAIQSLIDLHNHDLGENHHLRVSFSKSTI
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggcgaggccgagggggcaggggaggcggggccatcctgcgccgccattttgtg
agtctatataacacgtcgccgttgagttcgctcttgctattccggcgcctccgttccctt
cgggccgccttcgtgtgcaatggacggcattgtccaagatataacagttggtacaaagcc
aatggaaatgacagcaagaagttcaaaggtgacagcaggagcacaggggtcccctcgcga
gtgatccacatccgcaagctgcccagcgacgtcacggaagccgaagtgatctccttgggg
ctgccctttggaaaagtcaccaacctgctcatgttaaagggaaagaaccaggctttcata
gaaatgaacaccgaggaggcagcaaacaccatggtgagctactacaccacagtcacaccc
gtcctccgtagccagtccatttatatccagttctccaaccacaaagagctgaagacggat
aactctcccaaccaggcgcgtgctcaggcagccctgcaagcagtgaattcagttcagtct
ggaaacctgactctgtctgcctcggccgcagccatagacgctgggatggtcatggctggc
caaagtcccgtcctgaggatcattgtggaaaacctcttctatcctgtcaccttggatgtc
ctgcatcagattttctccaagtttggcacagtcctgaagatcatcacgttcaccaagaac
aaccagttccaggcactcctgcagtacgcggaccctgtgagcgcccagcatgccaaactg
tctctcgatgggcagaacatctacaatgcctgctgtacactccgcatcgactgctccaag
ctcaccagcctcaatgtgaaatacaacaatgacaagagcagggactatacgcgcccagac
ctgccttctggggacagccagccctccctcgaccagaccatggcggctgcctttggcgcc
ccggggatcatttctgcctctccgtacgctggcttccctcctgcttttgccattcctcaa
gctgcaggcctctcagttccaaatgtccacggagcgcttgctcctttggctatcccatca
gcagcagcagccgcggctgccgcaggacggattactattcccggcctcaccggggcaggg
aactctgttctgctggttagcaatttgaaccccgagagagttacaccccaatgcctcttt
attcttttcggggtctatggtgacgtgcaaagggtgaagatcttgtttaacaagaaagag
aatgccttggttcaaatggcagacggcaaccaagcccagctggccatgagtcacctgaat
gggcagaagctgcatgggaagcccatccgcatcacactgtcaaagcaccagaccgtgcag
ctgccccgtgagggccaggaggaccagggcttgaccaaggactatggtaactcgcctctc
caccgcttcaagaagcccggctccaagaacttccagaacatcttcccgccttctgccacc
ctccacctctccaacatcccgccttccatttctgaagacgacctcaagatgctcttctca
agcaatggggggatggtgaaaggcttcaaattcttccagaaggaccacaagatggccctc
atccagatgggttctgtggaagaagccatccagtcactcatcgacctccataaccacgac
ctcggtgagaaccaccacctgcgcgtgtccttctcaaagtccaccatttaa
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