Hemicordylus capensis (graceful crag lizard): 128346215
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Entry
128346215 CDS
T08891
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128346215 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128346215 (SMARCD1)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128346215 (SMARCD1)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128346215 (SMARCD1)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128346215 (SMARCD1)
PBAF complex
128346215 (SMARCD1)
GBAF(ncBAF) complex
128346215 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
128346215
NCBI-ProteinID:
XP_053155208
LinkDB
All DBs
Position
2:complement(423465628..423479718)
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AA seq
512 aa
AA seq
DB search
MAARAGFQAVAPSGGGGGAGPGAGPLGPGAAGPPVRMGPAPGQGMYRSPLPGAAYPRPGM
LPGSRMTPQGPAMGPPGYGGSPSVRPGMAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNA
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIE
LDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLAR
LLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVLCDKYLQQIFESQRMKFSEIPQRLHA
LLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNK
IHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYF
QPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggcgggtttccaggctgtggctccgagcggtggcggtggcggagctggc
cctggggcgggaccgctggggccgggagccgctgggcctcctgttcggatgggcccggcc
cctggacagggaatgtaccgctctcctctgcccggcgccgcatacccgcgccctggcatg
ctgcctggcagccgcatgactcctcagggacctgcgatgggacctcccgggtatgggggg
agtccttccgtccgccctgggatggctcagtcaggaatggaccagtctcgcaaaaggcca
gcacctcagcagatccagcaagttcagcaacaggctgtgcagaaccgtaaccacaatgcc
aagaagaagaagatggcagataagattctacctcagcggatccgggagctagttccggag
tctcaggcatacatggatttgttggcgtttgagaggaagctggaccagaccatcatgagg
aagaggctggatatccaggaggccttaaaacggcccattaagcaaaagcggaagctccgc
atctttatctccaacaccttcaatccagccaaatcggatgcggaggatggcgagggcacg
gtggcttcctgggagctgcgagtggaagggcgactgctagaagattctgctctctccaag
tatgatgcgactaagcagaagagaaagttctcatccttctttaagtctctggtgattgag
ctggacaaggacctctatggcccagataatcacttggttgagtggcataggactgccacc
acccaagagacggatggtttccaggtgaaaagacctggagatgtcaatgtgcgctgcact
gttctcctgatgctggactaccagcctccacagttcaaactggacccacgtctggctcgc
ctcttggggatccacactcagacacgcccggtcatcatccaggcgctgtggcagtacatc
aagacacacaagcttcaggacccccatgagcgggagtacgtcctttgtgacaaatacctc
cagcagatatttgagtctcagcggatgaagttctccgagatcccccaaaggttgcatgct
ttgcttatgcctccagagccaatcatcatcaaccatgtcatcagcgttgatccaaatgat
cagaagaaaactgcctgctatgacattgatgtggaagtggatgatactttgaagacccag
atgaattctttcctgctttccacggccagccagcaagagatagctgcactggataacaaa
atccatgagaccatagaaaccattaaccagctgaagacccagcgagaattcatgctgagc
tttgccagagacccccaaggcttcatcaatgactggctgcagtcccagtgccgggatcta
aagactatgactgatgttgttgggaacccagaagaggagcgccgagctgaattctacttc
cagccatgggctcaggaggctgtgtgcagatacttctactctaaggttcaacagagacgg
caagagctagaacaggctctgggaatccgcaacacctag
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