Hemicordylus capensis (graceful crag lizard): 128346284
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Entry
128346284 CDS
T08891
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcg03016
]
128346284 (TARBP1)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128346284 (TARBP1)
Enzymes [BR:
hcg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
128346284 (TARBP1)
Transfer RNA biogenesis [BR:
hcg03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128346284 (TARBP1)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
128346284 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
128346284
NCBI-ProteinID:
XP_053155404
LinkDB
All DBs
Position
1:complement(380669914..380752313)
Genome browser
AA seq
1638 aa
AA seq
DB search
MELVLADTLLSQCPDSGALLRAVCGEDAALSVERAEMLHFLLQRVAATAGSGWRGQGNER
GEEEEAAAARRVAWEAALGRCLPMLLSWGAGGGSAGGSQKEELRLLRAACGALQCCASLC
GPPLAERLAQKALEDGQLRTEAAVEVLAALAPWLEEPELLGRTVKAALRLLRGGGGGGDG
RVEEEEEEEERDALLVAGRLLPALGRNSAALRLVWEGLMLAPKSAPERVGRTLLVLSALS
DAVFPADAQQQQRGSSTGDAPLQQLDARLCSRFWDVVQKGLTESDALCRKRARYLLKRAV
DVSNKLCAEYWCSTDAENGPCLFWWCAEKNNQLTQFWDNYILIMETLEGNQIHVIKPVLP
KLNSLYEHAVSEQKDCWVFHPSWHMCIYKRMFESDNKTLIREGVFHFLEIWQTNRFPTSP
GFSEFITGPLMDALSESSLYSRLSGQMIGTCPPLAIKLQKFLATFLTNLPEEEKSRFLLK
FIQKMSNRHWCAVPILFLSMALAHIPACSVLDIEGLLALRDVLQCTMITHQILLRGAAQC
YLLKAAVLLTDVEKVSLSDISNFIISLRPEESLGRGTGLWTTLCDWLHANDKCFRRWLNC
DVPQDKTALGVYVQFLVEDYLKTPIVSHDCLMPDWLEAKLVATMILLAADVEEMKHKSNG
NGSTERIELKALLNPLLDVLLKLGTNPYISTLKTDKCLQLLLKLLQTWSIRRYRSQVDGI
ITFLQNSFMAATESLLDFLLRRLTANELNTISDLERCNLYLAVFSELTNFCSIKCWKKRT
SICSFISSLINASLCNLQERNSEEEVKLGEQIQKVVSMASLRIICEIIDQKSDLQLESLP
AVDTLKTVFLCAQLNHVLKKPSSMEKNSSFEEPASHQGWGKIVALYIHDQWSCLHFILNN
YQNVSKDKSLEQFLSDVQKCTKTLQSALEAITILPSDHVSPVFHCMKILVSKLLGSSESL
CIEAFDLAWKTISSLSNTQLIFWPNLKAFVQFVFDPEVLAAAAENKSQAYIKIKEIMFQM
IEMSSTKTGVFNMLLNYCCQSWIFPPFGNTSAVENVFSNAGNYSELLIEACLFGTVFRRD
QRLIQEVCAFVENLGEECAANIVTESTKRDDHYVRVCAIKFLCLLDESNPLHKKFIEDFV
MKLLDKGELISKSKTRYYVNSLQHRVKNRLWQTLLVLFPKLHEDNLTRTIDRILRAGYSN
NQASVKYLIEWTIILILHKFPHFLQKFWDCFSYGEDQLKTSICTYLAVLSHFDIILQNIS
EKTPVLKKALVVVLQWCFHHNFSVRLYALIALKKIWGLCKALYVDDFETLTPVIECSLNQ
AESMHGTGCQFWKRNLEEGHAVTYCSHPPGNAKKNWQRIQKHFFFENFHPLKDYCLEAIF
YTLPRLSDIAEEEWISLSKFTAFTVIPLSVTFPYYHSETELLDLKPSDWSQQDMGLNSAE
LGNQRQWTDVQKKIIPWNTPDLDLEFVFQDRATKLGKSNSKLIVVASLIDKPTNLGGLCR
TCEIFGVSALIVGSLHYVNDKQFQYLSVSAEQWLSLIEVKPFQLVDYLEQKKTEGYTIIG
VEQTAKSCDLTEYCFPEKSLLLLGNEHEGIPANLIQQLDICVEIPQQGIIRSLNVHVSGA
LLIWEYTRQQIIKEKSQR
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atggagctggtcttggcggacacgctactctcgcaatgccccgactcgggcgcgctgctc
agggcggtgtgcggcgaagatgcggcgctctcagtggagcgagcagagatgttgcatttc
cttctccagcgggtggccgcgacggcgggaagcggttggcgcgggcagggtaacgagcgc
ggggaggaggaggaggcggcggcggcgcggcgggtggcctgggaggcggcgctgggtcga
tgcctcccgatgctgctcagctggggcgccggcggtggctcggccggcgggtcccagaaa
gaggagctgcggctgctgagagccgcctgcggggcgctgcagtgctgcgcctcgctctgc
gggcccccgctggcggagcgcctggcccagaaggcgctggaggacgggcagctgcggacg
gaagccgccgtggaagtcctggccgccttggccccttggctggaggagccagagcttctg
gggcgaaccgtgaaagcggctctgaggctgctgcgtggtggtggtggtgggggggatggc
agggtggaggaggaggaggaggaggaggaaagggacgctttgctggtggcggggaggctg
ctgcccgcgctgggcaggaacagcgccgccctgagactcgtctgggaagggctgatgctg
gcgcccaagagcgcccccgagcgtgtcggccggactctgctggtcttgagcgccctctcc
gacgcagtgtttcccgcggacgcgcagcagcagcagcggggcagcagtactggtgacgcg
cctctccagcagctggatgctcggctgtgtagtcgcttctgggacgtcgtgcaaaagggg
ctgaccgagagcgacgccctgtgcaggaaaagagcccgttacctcttgaagcgagctgtg
gacgtgtccaataaactatgtgcggagtattggtgcagcacagacgctgaaaatggacca
tgtcttttctggtggtgtgctgaaaaaaataatcaacttactcagttttgggacaattac
attttaattatggagactttggaaggaaatcagatacatgttataaaaccagtattacca
aagttgaatagtttatatgaacatgctgtatcggaacaaaaagattgttgggtatttcac
ccatcatggcatatgtgcatttacaaaagaatgtttgagagtgacaacaaaactttgata
agggaaggtgtctttcacttccttgaaatctggcaaaccaatcgctttcccacatcacca
ggattttcagagttcattactggaccattaatggatgctctttcagaaagttctctttat
agcaggctgtcaggtcagatgataggaacttgtcctcccttagcaataaaactgcagaag
ttcttggctactttcctcacaaacctcccagaggaagaaaaaagtagatttttgttaaag
tttatacagaagatgagcaataggcactggtgtgctgttcccattttgtttctctccatg
gcattggcacatattccagcatgtagcgttctggatattgaaggacttctagctctgaga
gatgtcctgcaatgtactatgatcacacatcagatactgctacgaggagctgcccagtgc
tatcttcttaaagcagctgtactcctgacagatgtggagaaagtgtcactctcagatatt
tcaaacttcattatatctctgcgaccagaagaatcattaggcagaggaactggtttgtgg
acaacgctttgtgattggttgcatgcaaatgacaagtgctttcgaagatggttaaactgt
gatgtgcctcaagacaaaactgcgttaggtgtttatgttcagtttcttgtggaagattat
ctaaaaacacctatagtcagccacgattgccttatgcctgattggttggaagctaaactt
gttgctacaatgattcttctggctgcagatgtggaagagatgaagcataaatccaatggc
aatggcagcactgaacggattgagctgaaggctctcctaaaccctctactggatgtcttg
ctgaaacttggcacaaatccctacatttcaacactgaaaactgataaatgcctacaactg
ctattgaagttactgcagacttggtcaatcagacgttaccgttcacaagttgatgggata
ataacatttctccagaattcatttatggctgccacagaaagtctgttggattttctcctc
cgaagacttacagcaaatgaattaaatactatttcagatttggagcgctgtaatttatat
ctggcagtattttcagagctaacaaacttctgctcaatcaaatgctggaaaaagaggaca
tctatctgtagtttcatctcctctctgataaatgcctccctctgcaatctgcaagaaagg
aatagtgaagaggaggtaaaacttggtgagcagattcagaaagtagtcagcatggcatcg
ctaagaatcatttgtgaaattattgatcagaagtcagatcttcagcttgaatctctacca
gctgtagataccctgaaaacagtgtttttatgtgcacaacttaaccatgtattaaagaag
cctagcagtatggaaaaaaatagttcctttgaggagccagcatctcatcaaggatggggg
aaaattgttgcactttatatccatgaccagtggagttgtcttcattttattcttaacaat
tatcaaaatgtttctaaggacaaaagtctggagcaatttttgtctgatgttcaaaaatgc
acaaaaactttacagtctgcactggaagcaataactattcttccatctgaccatgtttca
cctgtgtttcattgtatgaaaatactggtttccaagcttctgggatcttctgaatctctg
tgcatagaagcttttgatctagcatggaaaactatatcttctcttagcaacacacagctt
atattttggcctaatttaaaagcttttgttcagtttgtgtttgatcctgaagttcttgct
gctgctgcagagaataagagtcaagcatacattaaaataaaggagatcatgtttcagatg
attgaaatgtcctcaacaaaaactggagtctttaatatgctgttaaattattgctgtcaa
tcatggatttttcctccttttggtaacacaagtgctgtagaaaatgtcttttcaaatgct
ggcaattacagtgaacttctcatagaggcctgcttgtttggaactgttttcaggcgtgat
caaagactcattcaggaagtatgtgcttttgtagaaaaccttggagaagaatgtgcagca
aatattgttacagaaagtacaaagagagatgaccattacgtgagagtttgtgccatcaaa
ttcctgtgcttgctagatgagtcaaatccattgcacaagaagtttatagaagattttgtt
atgaaactacttgataaaggtgaattgatatccaaatcaaaaactcgctattatgtgaac
tccttgcagcacagagttaaaaatcgactttggcagacgctcctagttcttttcccaaaa
cttcatgaggataatttaacaagaactattgacagaattcttcgggctggatatagcaac
aatcaagcatctgtaaagtatctaatagagtggacaataatcttgattctacacaagttt
ccccattttcttcaaaaattctgggattgctttagctatggtgaagatcagcttaaaact
agcatctgcacgtatttagcagtgttgtcacattttgacataatacttcaaaatatatct
gagaaaacaccagttttgaagaaagctctagtagttgtcctacagtggtgcttccatcac
aatttcagtgttcgactttatgctttaattgctcttaagaagatctggggactgtgcaaa
gcattgtatgtggatgactttgagactttaactcctgttattgaatgcagtcttaaccaa
gcagaaagcatgcatggaacagggtgccagttttggaagaggaaccttgaagagggtcat
gcagtaacttactgctcccaccctcctgggaatgctaaaaagaactggcagcgcatccaa
aaacacttcttttttgaaaacttccatccacttaaggattactgtcttgaagcaatattt
tacactctaccacgtctttcagacattgctgaagaggaatggatctctctctctaaattt
acagcattcacagttattcctctgagtgtgacatttccatattaccattctgaaactgaa
ctccttgatttaaagccaagtgactggtcccagcaagatatgggtttgaattcagctgag
ctaggtaaccaaagacaatggacagatgttcaaaaaaagattattccttggaatactcct
gatttggacctggaatttgtatttcaagaccgggcaactaaacttggtaaatcaaacagt
aagctgattgtagtggcttcactcattgataaaccaaccaatttgggaggcttgtgtcgt
acatgtgagatatttggggtgtctgctctaattgttggcagccttcattacgtaaatgac
aaacagtttcagtacctcagtgtttctgctgaacaatggctttcccttattgaggtgaaa
ccatttcagcttgttgattatttggagcagaagaaaacagaaggctacactataataggc
gtggaacaaacagctaaaagttgtgatctaacagaatattgctttccagagaaatccctg
ttgttgctaggaaatgagcatgagggaatccctgcaaacctgattcaacagctggacatt
tgtgttgaaattcctcagcaaggaattattcgatcacttaatgtccacgtaagtggagct
ctgctgatttgggaatatacaaggcaacagattatcaaggaaaaaagtcaaagataa
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