Hemicordylus capensis (graceful crag lizard): 128346489
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Entry
128346489 CDS
T08891
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128346489 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcg03009
]
128346489 (REXO1)
Ribosome biogenesis [BR:
hcg03009
]
Eukaryotic type
Pre-60S particles
RNases
128346489 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
128346489
NCBI-ProteinID:
XP_053155859
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Position
2:complement(212312957..212345864)
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AA seq
1206 aa
AA seq
DB search
MLRSSGFFRGVECPFGPACGRPYCPFRHAPGHAWPPRRLRPQAAGPSTRGPAECGYDPYN
PELPKPSAQSENEPLEDVADTAPSILELELVNKAIEAVKNEVEREQKKYEELLGTAKEYG
SSEPSGGSTAPSSFTALEYSPGNYTVSHGADYNPTPLAAAVTNQSSKYTLDSFDTVKSKG
SSLEYVPTVVTQPKKYSSSVAKSKYIIDNSKPSTDLEYDPLLNYSARLLSKAASKQQKGA
KRKRAADHREAYSPSRKKHCEAASNDEPLARFSDSEEECPTPSVTHSKPQDSSESKLSDE
VVVKEKRSQQKDSSSRQMKEMAVQYDMGDIKSPWKPMAQDSLEKSANTPSSRHAKEEERN
SVLPKDKLRKKNLDGHNTEEKKERSKVADKERAGMKARRQNGERIKEQRGKSHADGHSKK
LDKGKLAGGKEEASSKRKSEGPGKRSGTEKVGSVKKDGKLKNRKVASTAERTDRKGKPPE
KSKEKSGGSQVKGGSEAKCKPKRRALSHVDLFGDESGDEGQAAQPLPAAFPDVSSDSDGD
NDCFPLPQSNGVSSVKRPKLSKCRPPSSSSSDDEVDYSVLERDLDFESDPMEECLRIFNE
SVDVKMEDKGRLGKQPSKQEGTEEKVTEDSLTTLFPGQKRRISHLPKQGNAEAPSKPVIR
PYRPPTAQEVCYQRIQLAQKQAAQLVQQQPRPAPVLSTAPPRAAFALHKGEKKRIAHVPH
TALSAAPRSASGGQKKPIPSGSTASSNGTDTLSLKARTLTGMASKTTTTNAPKRIAHAPT
LQSAALKRPVIPTEFGAKVPTNIRQRYLNLFIDECLKSCPSQQEAFDKALSEEKVAYERS
TSRNIYLNVAVNTLKKLRSLLPGPSQGALKTNRKVVSHEAMLGGKLAAKTSFTLNRSASL
RTEDLTGAALYRRLKEYVMTEDELKENGYPMPCPEKPSRAVVFTVEEKKAADSSCRVCCR
CGAEYMVTPSGNCVRKEECVHHWGKLRKQRVPGGWETHYNCCSGAVGSPGCQVAKQHVHD
GRKENLDGFVKTFEKLPSPDGYPGIYALDCEMCYTKQGLELTRVTVINADLKVVYDTFVQ
PDHKVVDYNTRFSGVTEADLENASITLRDVQAVLLNMFSMDTILIGHSLESDLFALKMIH
CTVVDTAVVFPHRLGMPYKRALRTLMADYLKRIIQDSVEGHDSSEDARACMELMIWKIKE
DAKVKR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgctccgctcgagcggcttcttccgcggcgtcgagtgccccttcgggccggcctgcggg
aggccttactgccccttccgacacgcgccgggacacgcctggcccccgagacgcctccgc
cctcaggccgccgggcccagcacacgggggccggcagaatgtggctatgacccttacaac
ccagaactccccaagccttcagcgcaaagcgagaatgaaccgctggaggacgttgccgat
acggctccgagcattctggagctggagctggtcaacaaggccattgaggcggtcaagaac
gaagttgagcgtgagcagaagaagtatgaggaactcctggggactgccaaggagtatggc
tcgtccgagccctctggtgggtcgacagcacccagttctttcacggccttggaatatagc
ccaggtaactacactgtgagccatggtgctgactacaatcctacccctcttgcagccgcc
gttactaatcagtcaagtaaatataccttggattctttcgacactgtcaaatccaagggc
agctcgttggagtatgtgcccacggtggtcacccagccgaagaagtacagcagttccgtc
gcaaaaagcaagtacatcattgacaactccaagccgtcgacggatctcgaatacgaccct
cttctgaattactctgcgcggctcttgagcaaagctgcttctaagcaacagaagggggcc
aagcggaagagggcagcggatcacagggaggcctattctccctcccgcaagaaacattgt
gaggcggcgagcaacgacgaaccgcttgcaaggttctccgactcggaagaggaatgccca
actccatcagtcacccattcaaaacctcaagacagttcagaaagcaagttgagtgatgaa
gtggttgtcaaagagaagagatcccaacagaaggattcgagttctcgccaaatgaaagag
atggctgtgcagtacgacatgggagacatcaaaagcccttggaagcccatggcccaggac
tcgcttgagaagtcagccaatacgccttccagccggcatgccaaagaggaggagagaaac
agtgtgttgccgaaggacaagttgagaaagaaaaacctggacggccacaatacggaggag
aagaaagagcgaagcaaggttgcagacaaggagagagcaggcatgaaggcacgtcgtcag
aacggggagagaattaaggagcagcgaggcaagtcccacgctgacgggcattcgaagaag
cttgacaaggggaaattggctggaggaaaggaggaagcctctagcaagaggaagagcgaa
ggacctggcaaaagatctggcacggagaaagtgggaagtgtcaagaaggacggtaagctg
aagaacaggaaagtggcctctacggcggaacgtacagacaggaagggcaagccaccagaa
aagtcaaaggagaaatcggggggctcacaggtgaaggggggctccgaggccaagtgtaaa
cctaaacggcgggcgctgagccatgttgacctctttggggatgagagtggggacgagggg
caggcagcgcagcctcttccggcggctttcccggatgtgagttcggattcagacggagac
aacgactgctttcctttgccccagagcaatggggtgtcgagtgttaagcggcccaagctt
tccaagtgtcgtcctccttcctcatcctcttcagatgatgaagttgattactcagtccta
gagagagacctggacttcgagtcggacccaatggaggagtgcctccgcatttttaacgaa
tccgtggatgtgaaaatggaagacaaaggcaggctgggaaaacagccatctaagcaggaa
gggactgaggaaaaggtgacggaggacagtctaaccaccctctttcctggccagaaaagg
aggatttcgcatctgcccaagcaggggaacgccgaagccccgagcaagccggtcatccgg
ccgtaccgcccgccgactgcccaggaggtctgttaccagaggatccagctggctcagaaa
caggcggcgcagctggtgcagcagcagcctcggcccgccccggtgctgtccacggcgcct
ccgagagctgcttttgccttgcacaaaggagaaaagaagcggattgcccacgtccctcac
acggctctttctgcagcccccaggtctgcctctggcggtcagaagaaacccattccatct
ggaagcactgcgtcttccaacggcactgacactctctctctgaaagctcgtaccctcacc
gggatggcgtccaagaccaccaccacgaatgccccaaagcggatagcgcacgcccctacg
ctgcagagtgcggccctcaagaggccggtgattcccaccgagtttggagccaaggtgccc
accaacatccgccagcggtacctcaacctcttcatcgacgagtgcttgaagtcctgcccg
tcacagcaggaagcgtttgacaaggctctgtcggaggagaaggtggcgtacgagcgcagc
accagccggaacatctacttgaacgtggctgtgaacaccctgaagaagctgcggagtctc
ctgcccggcccctcgcagggagccctcaagaccaacaggaaagtcgtgtcccacgaagcc
atgcttggcggcaaactggctgccaagaccagctttacgctcaaccgctccgcgagcttg
cggacagaagacctgactggggccgccttgtaccggagactcaaggagtatgtgatgacg
gaagacgagctgaaggagaacggctacccgatgccgtgtcccgagaaacccagccgggcg
gtggtcttcactgtggaagagaagaaagctgccgatagttcctgccgagtgtgctgccgt
tgtggcgctgagtacatggtgaccccatcggggaactgcgtccgcaaagaagagtgtgtc
caccactgggggaagctgcgcaaacagagagtgccgggaggctgggaaacacactacaac
tgctgttcaggagccgtggggtcgccagggtgccaagtagccaaacaacacgttcacgat
ggccggaaggagaacctggatggctttgtgaagacctttgagaagctgcccagcccagac
ggctatccgggcatctacgccttagactgtgaaatgtgttacacgaagcaagggctagag
ctgacgcgcgtcactgtgatcaacgccgacctgaaggtggtctacgataccttcgtccag
cctgaccacaaggtggtggactacaatacccggttttcgggcgtgacggaagcagatctg
gagaatgcatccatcaccctgcgggatgtccaggcggtcctcttgaacatgttcagcatg
gacacgatcctgataggacacagtttggaaagtgacttatttgcactaaagatgatccac
tgcacggtggtcgacacggcggttgtcttcccccatcggctcggcatgccgtataagcgg
gcgctgcgcaccttgatggccgactacctcaaacgcatcatccaagacagtgtggaaggt
cacgactccagcgaggacgcccgagcgtgcatggagctgatgatctggaagatcaaagaa
gacgcgaaagtgaagcggtga
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