Hemicordylus capensis (graceful crag lizard): 128347990
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Entry
128347990 CDS
T08891
Symbol
THBS4
Name
(RefSeq) thrombospondin-4 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04145
Phagosome
hcg04510
Focal adhesion
hcg04512
ECM-receptor interaction
hcg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128347990 (THBS4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128347990 (THBS4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128347990 (THBS4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128347990 (THBS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128347990 (THBS4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcg04147
]
128347990 (THBS4)
00536 Glycosaminoglycan binding proteins [BR:
hcg00536
]
128347990 (THBS4)
Membrane trafficking [BR:
hcg04131
]
Endocytosis
Phagocytosis
Opsonins
128347990 (THBS4)
Exosome [BR:
hcg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128347990 (THBS4)
Exosomal proteins of colorectal cancer cells
128347990 (THBS4)
Exosomal proteins of bladder cancer cells
128347990 (THBS4)
Glycosaminoglycan binding proteins [BR:
hcg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128347990 (THBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
128347990
NCBI-ProteinID:
XP_053159390
LinkDB
All DBs
Position
2:complement(45312096..45367160)
Genome browser
AA seq
800 aa
AA seq
DB search
MGRVNKVSLRYLRNDGKLNAVIFSNVLLADGKRHAVLLRLSSLQRGSSKAELYVDCVQMD
SIQELPKAFSGLLQSSESVELRTLQKKAQDTLEELKLVVRGSLSQVASLQDCFLPQNEPA
VQYPGVSTGDFNRQLLGHMMQMNQILSEVKDLLRQQVKETTFLRNTIAECQACGLGTGSF
PTPPPPPPKPKCEANTCFRGVQCRDTAEGFQCGPCPEGFTGNGVTCTDIDECRYNPCFPG
VRCVNTVPGFRCEGCPPGYTGQVIQGVGINAAKNNKQVCMDIDECQKNGNGGCVPNSQCI
NTVGSYRCGACKPGFTGDQIRGCRTERSCRNRALNPCSVHAQCTEARQGDISCVCGIGWA
GSGFVCGKDVDIDGYPDEELPCSSESCRKDNCKFVPNSGQEDADGDGIGDACDDDADGDG
IPNDQDNCVLASNVNQRNSDQDIFGDACDNCRMVLNNDQRDTDGDGKGDACDDDMDGDGI
KNVLDNCQRVPNREQKDKDNDGVGDACDSCPDISNPNQSDIDNDLVGDSCDTNQDSDGDG
HQDSTDNCPTVINSSQLDTDKDGLGDECDEDDDNDGIPDLVPPGPDNCRLVPNPGQEDDN
SDGVGDICESDFDQDTVIDRIDVCPENAEITLTDFRAYQTVVLDPEGDAQIDPNWMVLNQ
GMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQ
TEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHLRNSLWHTGDTNDQVRLLWKDPRNVGW
KDKVSYRWFLQHRPQVGYIR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggtgaataaagtctcccttcgatatttgaggaacgatgggaaattaaacgcc
gtgatcttcagcaatgtgttgctggctgatgggaagcgccatgcagtcctcctcaggcta
agcagcttgcaacgtggctccagcaaagccgaactgtatgtggactgtgtgcagatggac
tccattcaagaacttcctaaagccttttcaggtctattgcagagctcagagtctgtggaa
ttacgaacactacagaaaaaagcacaggacactttggaggagctgaaattagtagtaaga
gggtcattgtcccaggtggcaagcctgcaagactgttttcttccacagaatgagccagca
gttcagtatccaggtgtctctacaggtgattttaataggcagttattaggtcacatgatg
caaatgaaccaaatattaagtgaagtgaaagatcttctcagacaacaggttaaagaaaca
acctttttgaggaatacaatagctgaatgccaggcatgtggcctggggactggaagtttc
cccactccacccccaccaccccctaagcccaaatgtgaagccaacacttgtttcagaggg
gtacaatgcagagacacagcagaaggatttcagtgtggcccttgtcctgaaggcttcact
ggaaatggagttacatgcactgatattgatgagtgccgatacaatccatgcttcccagga
gtgagatgtgtgaacacagttccaggtttcagatgtgagggctgccctccaggatacacc
gggcaggtcattcaaggagtgggcataaatgctgccaagaacaataagcaggtctgcatg
gacatagatgaatgtcaaaaaaatggaaatggaggatgcgtcccaaattctcagtgtata
aacactgtgggttcctaccgctgtggagcgtgcaaacctggatttactggagaccagatc
aggggatgcaggactgaaagaagctgcagaaaccgagctttgaacccatgcagtgtccat
gcacagtgtactgaagcaaggcaaggagacatctcatgtgtttgtggcattggctgggct
ggcagtggctttgtgtgtggaaaagatgtcgatattgatggctatcctgatgaagaactc
ccatgctcgtctgaaagctgcagaaaggacaactgcaagttcgttccaaactctggtcaa
gaagatgctgatggagacggaataggagatgcctgtgatgatgatgcagatggggatggc
attcctaatgatcaagataactgtgtcctggcttccaacgttaaccagagaaacagtgac
caagatatctttggtgatgcttgtgacaattgccgtatggtcttaaataatgaccaacga
gacacagatggagatggcaaaggagacgcctgtgatgatgacatggatggagatggtatt
aagaatgttctggacaactgccagagagttcccaaccgggaacagaaagacaaagataat
gatggggttggcgatgcttgtgacagctgcccagatatcagcaaccctaatcagtcagat
attgacaatgacctagtaggggattcctgtgacaccaatcaggacagtgatggggatggg
caccaggacagcacagacaactgccccacagtcattaacagctcccagctagacactgat
aaggacgggctgggggatgaatgtgacgaggatgatgataacgatggcataccagacctt
gttcctcctgggccagataattgccggctggtccctaacccagggcaggaagatgacaac
agtgatggagttggagatatctgtgaatcagattttgatcaggacacagtgattgatcgg
attgatgtttgtcctgagaatgcagagatcaccctgacagatttcagggcttatcagact
gttgtcctggacccagaaggtgacgctcagattgatcccaactggatggttctgaaccag
ggtatggagattgtgcagaccatgaacagtgatcctggacttgctgtaggttacaccgct
ttcaacggggtcgactttgaaggtactttccatgtgaacacagtgacagatgatgactat
gctggcttcatttttggttatcaagacagttccagtttttatgtggtgatgtggaagcag
acggagcagacctattggcaagcaactccctttagagctgttgcagaacctggaatccaa
ctgaaggctgttaaatcaaagactgggcccggagaacacctgaggaattcactttggcac
acaggagacactaatgaccaagtcagattgctgtggaaagacccccgaaatgtcggctgg
aaagataaagtttcctatcgttggttcctgcagcacagacctcaggttggatatattagg
tag
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