Hemicordylus capensis (graceful crag lizard): 128348022
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Entry
128348022 CDS
T08891
Symbol
POU5F1
Name
(RefSeq) POU domain, class 5, transcription factor 1 isoform X1
KO
K09367
POU domain transcription factor, class 5
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128348022 (POU5F1)
03021 Transcription machinery [BR:
hcg03021
]
128348022 (POU5F1)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128348022 (POU5F1)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
128348022 (POU5F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128348022
NCBI-ProteinID:
XP_053159475
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Position
2:258133607..258164818
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AA seq
429 aa
AA seq
DB search
MAGYPFSVHRSNLPAVPSHEASGGFLPETFNGAIPGQGFPFRPDYGPQGGGMVESHPGGG
EAPRTCYSFAAGGDAWNRHHSMMTGPYMVSPSAEVCPGGPKVDIKVERDFDQPAPYYGLP
WTGTHMRSSSSLPCTGPGNSRETVSPDDEPRPSSSQANQLEERGSADSSPRSDGSRSPSG
PLPPGEGREEGGSEDEERPLPTNEELEQFAKELKHKRINLGYTQADVGLALGVLYGKMFS
QTTICRFEALQLSFKNMCKLKPLLQRWLEEADNNKDLQDRLCSMESAMIQARKRKRTSIE
TNVRGVLEAHYLRCPKPTLQVISQIAAELGLDKDVVRVWFCNRRQKDKRNLGTGSRDEYD
NPALLSPFPNPLQAPPPGLGPAHHQLAPPPPGYNGAAFTTLYLPQFHEGDPFGPSTSSST
VMGQPMPSN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtaccctttctctgtccaccgtagcaacctccctgctgtcccttcccatgaa
gcgagcgggggcttcttgcctgaaacctttaatggagcaattcctgggcagggctttccc
ttcaggcctgactacgggccccaaggaggagggatggtggagtcccatcccggtggcgga
gaggctcctcgaacttgctactccttcgctgcgggcggggatgcttggaatcgccatcat
tcgatgatgacgggcccttatatggtctctccgtcggcagaggtctgcccaggcggccca
aaggttgacatcaaggtggagcgagactttgaccaaccagcgccctactatgggctcccc
tggacaggaacccacatgaggtcttcctcctccttgccctgcaccggaccgggcaacagc
agggagaccgtctcgcctgacgacgagccccggccttccagcagccaggctaaccagctt
gaggagaggggcagcgctgacagcagtcccaggagcgatggcagtcgaagtcctagtggg
ccgctgccccctggagagggccgggaagaaggtggcagtgaagatgaggagaggcctctt
cctaccaatgaggaactggaacaatttgccaaggaactgaagcacaaaagaatcaacttg
ggctacactcaggccgatgtgggactggctctgggtgtgctgtatggtaagatgttcagc
cagaccaccatctgccgcttcgaagccttgcagcttagcttcaagaacatgtgcaaactg
aagcccctcctccagcgctggctggaggaggcggacaataataaggacttgcaggaccga
ttgtgctccatggagtcggccatgatccaggctcggaaacgcaaacgtaccagcattgag
accaatgtgcggggcgtgctcgaggctcactacctgcgctgccccaagcccaccctgcag
gtgatctcgcagattgctgctgagctcgggctggataaggatgttgtccgtgtctggttc
tgcaaccgtcgccagaaggacaagcgcaacttgggaactggctctcgggatgaatatgac
aaccctgctcttctgtcgcccttccctaacccactccaagctccaccccctggcctaggt
cctgcccaccaccaattagccccaccacctccgggctacaatggagctgcattcactact
ctttaccttccccagttccatgagggggacccatttggcccttccacatccagctccaca
gtcatgggccagccaatgccttcgaactga
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