Hemicordylus capensis (graceful crag lizard): 128348737
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Entry
128348737 CDS
T08891
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
128348737 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
128348737 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_4th
NDNF
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
128348737
NCBI-ProteinID:
XP_053160318
LinkDB
All DBs
Position
3:complement(299191147..299318297)
Genome browser
AA seq
1447 aa
AA seq
DB search
MRGLSSWMVLLALGSWLRLRAKGAVPLADFYPFGPAQGDAATPQQDDGGSGLRPIAVKFP
FFGAAHAALYVNNNGIISFLKEVSQFTPVAFPISNDRRVVAAFWADVDNRRAGQVYYRET
KDRAILERATKDIRQYFPEFPEFSAQWVFIATWYQVTFFGGNSFSPVNTFQIVLITDGML
SFTIFNYESVSWTTGMHASSGGDSAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIVDVEM
TTNVGIPGRWVFRIDDAQVQVGGCNNTTSVCLTLRPCLNGGKCIEDCITGNPSYSCSCLA
GFTGKRCHIDVDECASSPCHNTATCINGINSFSCWCPPGFKGVTCEIEESPCEAKECQNG
GECQAVNRTAVCLCQPGFTGENCETEINECESNPCLNGGRCMDLVGNYSCACVAPFTGQR
CETDPTACEGKNCRNRQTCNYIRPGRYICTCSPGYYGNNCQYGGPRMPSACISNPCQNEG
TCLETSQGYVCECHEGYTGMDCKDKLLENCECRNGGKCLDGNVTICQCPPGYFGLLCEFE
VTTTPCNMNTQCPDGGYCMEYGGSYLCVCHTDYGTNHTVPPSPCDSEPCLNGGSCDALDD
SYTCECTRGFIGRHCEKARPKLCSSGPCRNGGTCKESEGEYHCTCPYRFTGKHCEIGKPD
PCASGPCQNGGTCFHYIGKYKCDCLQGYAGRHCEIAPSPCLLSPCENGATCEELGNSYAC
MCPAGYMGRHCQSEIDCGIPSEVKHAQVAFNSTSVGSLAEYRCDLGYILSPPNNPRVCRA
QGAWSDPPECNEIDECRSQPCLNGGLCKDRIATFLCFCKTGYTGHHCELELDECRSGPCK
NGGTCKDQPGSFICHCPGGFLGAQCETEVDACESNPCQNGGDCENYSGSYLCVCPEGFIG
YHCEIASDPCFSNPCGSRGYCLPSNGSHICTCKVGYTGKTCEKELLPPTSLKVEKVEETG
LSISWRPPKDQAARHMIDGYAVTYVSFDGSYRWTDYVDRSRAAHHLRALASGKAYNISVF
SVKRKPNNKNDISRPVMLVTRTRPRPVEGFEIANVTSTTITVHWTLHKLEHSTVSKVRLS
IRQPDDVEDRAVELNNTETKYTFWDLQPGQKYLIHMWTLSGLGAEDHPTESFATAPFYVW
TRPLHPRNLTASRITATSVQMIWEQPLVGSGEGYIINVTTSQSVKSRYVPNGKLSSYTVR
DLNPGQRYRLSVMAVQNTDQGQVISEPAHLYITALQKDGTPERRWSQTGHPRVLRNRVPP
AFLPELRLLADHNTPEEPSQAPRFTELVDGRGRITTKFSSSPSRPVTVRTQPEAPIKVEE
NMEESPNRASLALQLSEPESSKKESDKQNCSINFCKNGGTCVAVSDSYHCDCNPGFKGRQ
CELACKKVPQSCTRLYSETKSFPVWEGGVCHYLYKRTYKIHQDVCYKESCESTVTNKALS
RKQSSRH
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcctgtccagctggatggtgctgctggcgctaggcagttggctccggctgcgg
gcgaagggcgccgtgcccctggcggacttctaccccttcgggccggcgcagggggacgcg
gccaccccgcagcaagacgatggcggctccgggctccggcccatcgctgtgaagttcccc
ttcttcggcgcggctcacgcggcgctctacgtaaacaacaatggaatcatctcctttctg
aaagaagtgtctcagtttacaccagtggctttccccatctccaatgaccgacgtgtggtt
gcagctttctgggctgatgttgacaaccggcgtgcaggacaagtgtattaccgggaaacc
aaggaccgagccatcttggagagagccactaaagacatccgtcaatatttcccagaattc
ccagagttctctgcccaatgggtattcatagccacttggtaccaagtcaccttctttgga
ggaaattcattttctccagtgaatactttccagatagtcctcatcactgatggcatgctg
tccttcactatcttcaactatgagtcggtcagctggactactggcatgcatgccagcagt
ggaggagactcagccggcctgggaggcattgcggcccaggcaggtttcaatgccggtgat
ggaaaacgatattttaacattcccggatcccgcactgatgacattgtcgacgtggagatg
acgacaaatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaa
gtggggggctgcaacaacacaacttcggtgtgtctgacactccgcccttgtctgaatgga
ggaaagtgtattgaagactgcatcacagggaatccctcgtactcctgctcctgtttggct
ggcttcactggaaagcggtgtcatattgatgtggatgagtgtgcttccagcccatgtcat
aacacagccacctgtatcaatggcatcaacagcttcagttgttggtgtccaccaggattc
aaaggagtcacatgtgaaattgaggagtctccgtgtgaagccaaagaatgccagaatggt
ggtgaatgtcaagcagtaaacaggacggctgtgtgtctctgccagccaggctttactgga
gaaaattgtgagacagaaataaatgaatgcgagtccaatccgtgcctgaatggtgggcga
tgtatggacctggttggcaattactcctgtgcatgtgtagcgccattcacaggacagcgc
tgtgaaacagatcctacagcctgtgagggcaagaactgcaggaaccggcagacatgcaac
tatatccgcccagggcgctacatctgcacatgctctccaggctactatgggaacaactgt
cagtatggaggacccagaatgcccagtgcatgtatctccaatccatgccagaatgagggc
acttgccttgaaaccagccaaggctatgtgtgtgagtgtcatgagggatacaccggcatg
gattgcaaagacaagttgttggagaactgtgagtgccgaaatggaggaaagtgtctggat
ggaaatgtcacaatatgccagtgcccaccaggatattttggtcttctctgtgaattcgaa
gtgactactacaccttgcaatatgaacacgcagtgtccagatgggggatattgtatggag
tatggtggcagttacctgtgcgtgtgccatacagattacggcactaaccacactgtgcca
ccatctccctgtgactcggagccttgcctgaatggtggatcgtgtgacgctctagatgac
tcctacacctgcgaatgtacccgagggttcatcggcaggcattgtgagaaagcaaggcca
aagctgtgcagctccgggccctgccgcaatggagggacgtgtaaggaatcggagggtgaa
taccactgcacctgtccctaccgcttcacagggaagcactgtgaaataggtaaacctgat
ccctgtgcctcagggccgtgtcagaatgggggcacctgcttccattatattggcaagtac
aaatgtgactgcctccaaggatatgctggacgccactgcgagatagctccttctccttgt
ctcctgagtccatgtgaaaatggagccacttgtgaggaactcggcaacagctatgcctgc
atgtgtccagctggttacatgggaagacactgccagtcagagatagactgtggcatcccc
agtgaagtaaagcatgctcaagtggcatttaactctacttcagtgggatctctggctgaa
taccgctgtgatcttggctatatcctaagtcccccgaataaccctagggtgtgcagagcc
caaggtgcatggagtgaccctccagagtgtaatgaaattgacgagtgcagatctcagcca
tgtctaaatgggggcttgtgtaaagatcggattgccacattcctgtgcttctgcaaaact
ggctacacaggacaccactgtgagttggagcttgatgaatgtcggtcaggcccatgcaag
aatggcggaacctgcaaagatcagcctggatcctttatctgtcattgtcctggtggtttt
cttggagctcagtgcgaaactgaagtggatgcctgtgaatcaaacccttgtcagaatgga
ggagattgtgaaaattacagtggttcctacctgtgtgtctgcccagagggcttcattggc
taccattgtgaaatagctagtgacccctgtttctccaacccctgtgggagcagaggctac
tgtctgcccagtaacggatctcatatctgcacctgcaaagtgggctacactggcaagacg
tgtgagaaagaactgctgccaccaacgtcattaaaggtggaaaaagtggaggagacgggg
ctgtcaatttcttggcgtcctcccaaggaccaggctgccaggcatatgattgatggctac
gccgtgacgtacgtatccttcgacggctcttaccgctggactgattatgtggaccgaagc
cgtgctgcccaccatttgcgggcactagcctccggcaaagcctacaatatttctgtcttt
tcagtcaaacgcaaaccgaacaacaagaatgatatcagcaggcccgtcatgctcgtcact
cgtactagacctcgcccagtggagggatttgaaattgccaatgtgacttccacaaccatt
actgtgcactggactctccacaagcttgagcactccacggtcagcaaggtgcgtctgtcc
attcgccagccagatgacgtggaggaccgtgctgtggagttaaacaatacagagaccaaa
tatacattctgggaccttcaaccaggacaaaagtatcttatccacatgtggactttgagt
ggcctgggtgcagaagaccatccaactgagagctttgccacagcacctttctatgtgtgg
actcgacctcttcatcctagaaacctcactgcatccagaatcacagccacctctgttcag
atgatctgggaacagcccctggttggttctggggaaggctacatcatcaatgtcactacc
agtcagagtgtgaagagccgctatgtgcccaatggaaagctgtcttcctacaccgtgcgt
gacctgaacccagggcaaaggtatcgcttgtctgttatggctgttcagaacacagatcaa
ggacaagtgattagtgaacctgctcatctctacattacagccttgcagaaggatggcacc
ccagaaaggcgctggagtcaaacagggcatcctcgtgtactgagaaaccgggtcccccca
gcattcctgccagaactacgcctgcttgctgatcataatacccccgaggaaccctcacaa
gcacccaggtttacagaactggtggatggcagagggaggatcaccactaaattcagcagc
tcaccaagtagaccggtcactgtgagaacacaacctgaggctcccataaaagtggaggaa
aacatggaggaatcccccaatcgggccagcctggcattgcagctgtctgaacctgagagc
agcaagaaagaaagtgacaaacagaactgttccataaacttctgcaagaatggggggacc
tgtgtcgctgtctcagactcttaccactgtgactgcaatcctggattcaaaggcagacag
tgtgaactagcttgcaagaaggtgccgcagtcttgtactcgtctctactcagaaaccaag
tcctttccagtctgggaaggaggtgtttgccattacttatacaagaggacctacaaaatc
caccaggatgtctgctacaaagagagctgtgagagcactgttacaaataaggcacttagc
agaaaacaaagtagcagacactga
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